LOC110508626 (LOC106599727)


Basic Information

Item Value
gene id LOC110508626
gene name LOC106599727
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 15621664 ~ 15700456 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589282.2
GCGGTCTCCCGACGTTCATTTCATATTCTACCATAGTATTCAGTGTAAATGAGACACACAGTCACGTCTCCGCCCTTGTACCGATCTCAAACTTCGAGTCCAGACTCTTTTAGAGGATTTCCTTGGTAAAAATGTTTTCGGGTACAGCATGGGAGATTACAACTGGAGCACGAAGGCAAATAAGTGAATGAAGAGCGGGATAAGTACACCGCCCAACCGGCGGATATTTTCTGTATTGTGCTCATATTGACGCGCTTTTTTAATGTAGAAGGCTGATGTTAAGCGAAGTACGCACGGAGATTTAGTGTACTTTTCATTTGCCAAAATGGAAAGTGCGCGGACTGTCGTTGATATAGGCTCGGCAGATGTAAGTGCGAATAAGTTTAAGAAGCCTAGTGGACTGTCTGTCGCTCAGGGGAAGCCTGTGGATGATGGCGGTGGAAATGTGGCAGCCTCTCGTCTAGATATTAGAAATTCCCATGTTGCGTTGGGGTCTAGTGCTTCGAATAAAAGTAATGGAAGCACATCTACGAATGGTCGGAGTTTATCCAGTAACTCCAACTCGCTCCTGTTGAGACGGAGGAGGCTGAAGAGGAACCTCTCTGCAACCACTGCCACCTCAGCTGTCACTGCCGCCTTCGGCGCCAAGATGAACTCGGCCATCTCCTCTGCGTCTCTGCATACTCGGAGTCTGGATAGGAAGACGTTGTTGAGGCATCGGCAAAACATGCAACTACAGCCTTCAGATAGAGAGTGGGTGCGAGGGGATCTTCACAGGGGATCCATACACGTCCACGATAAACTCACGTCGCCTTCATATCCTAGGCCGGTGGTGTGCACGATGGATACTACAGCCGGCGAGATGGCGCTCCGTATGAGCAAACTCTGCAGTAAGTCGAGCACTGTATTGCGTATATTTTGTAAAGACAACTTAAAGACTGATCAAAACGGCAACTGTAATGTGAAGTATACATATAATGACGCCCAGTCTAAGCTAAAGGAAGATGGAAGTATCAAGTGCAACCATTCGGGACCCCCAGAACTCAGTGGCGGCCTATCGGACCAGCCAAGTGACAGGCTGAGGCTACTGCTTATGGAGAACGGCGATGAGAGGCAACAGGATTTAGATGCAAAACTTTTTACTCCAGACTCAGAGTCGCAAGATAATATAACTAACTCGTCGGATCTGAATTCTAACCTGGATCCTCCTAACGATTATGATTCAGAACAGAGGCTGAACGGACTGGACAGCTACGGGCTCAATTCTGGTTCAGACGTGGAGAGCAGCAGTGCATTCGATGACCTCAGCAGCTCAGGGGTCCGGCTCAGTGAGCACCGGGACTCCCTCAGTGACGACATGATCCTGGGCACAGAGGCATCCATCCTGAGCCCTACTTTTGATCGAGCCGTGGAGGGCCACGAAACCTATGGAAGCTCCTCAGACGAACTGGAGCTCGACTGTCCTACCACAAACGTTGACCCCATTCTCCCCAATGGCAACACTGTCGCTGCCAACTACAAGTTTAGCAACGGTGGGGTGACAAACGATATGGGGGCAGGTGACAGACTCAAACTTCTCAGTCTGGGCAGCCTGCCACCCAGCAGTAGCAGTCGCTCATTGTCCCGGGCCTTTATGAGAGTTCACACGCCCGACATCCAAGAACCTGACCATCGGCAAGGAGGTTTGAAAACAGGGTCGGGGGCGACCGATCAGGATTGGGATGCAGCAGGAGACACCAGTCCCACACTTTACGTTCAGCTCCACGGTGAAGCTGTCAGGAGGCTTGGGCAAGACGAAAGGCCTCTCCAGATCCAGAATGACTTTCTCTTCAAACTGGGATTTAAGGACCCGTGGCGCGTGCAGGAGGAAGGGATGAACACCGAGCTTGGCTCTCTGTTGCGGTTTTACGCAGGAAAGCCCCACAGCATCGAGAGCTCGGAACGCGTGCAACTGTCGGGGACGTATAATGTCCGCAAAGGGAAACTCCAGCTGCCAGTCAACCGCTGGACCAGACGCCAGGTGATCCTTTGTGGCACCTGCCTCATTGTCTCCTCCGTCAAAGACAGCCACACGGGCAAGATGCACATCCTGCCCCTCATCGGAGGAAAGgtggaggAGGTGAAGAAGCATAGCCACTGCCTGGCGTTCAGCTCAGCAGGGCCCCAGAGCCAGACCTACTACGTCAGCTTTGACAGCTTCACAGAACACCTGCGCTGGCACCGACACGCAGCCAagATGGTGTCCCAGAGGATCAACTCTGTGGACCTGTCCTGCTGCAGTCTGGAGCAGCTGCCTCCCAACCTCTTCTACAGCCAGGACCTCACCCACCTCAACCTCAAACACAACTTCCTCCCCACAGACCACCGTCTACACCAGTTACAGAGgTTCTCTCGTCTGCGTAGCCTCAACCTGTCTAATAACCAGCTGGGTCAGTTCCCCATGGCCATCTGTGACATCCCCACCCTCACCGAGGTCAACCTCAGCTGTAACTATCTGGCCAACGTGGGCCAAGCTGTGGGATCCATGACCAAcCTGCAGACGTTTCTCCTAGACGGTAACTGTCTGAGTGAGTTACCCAGTGAGCTGGGTTCACTCCAGAGACTGGGCTACCTGGGCCTGTCCTTCAACCAGTTTACCCACGTGCCCCAGGTGTTAGAGCGTCTGGCGTCCATGGAGAGGCTGTGTATGGCCGGCAACAGCCTGGACACGCTGGTGCTGCAGAGCTTCAGACTGCTCCGAGTCAAACACGTCGACCTACGGCTGAATAAGATCCGGGTGGTGGTTCCAGACGAGCCAGACCTGCTGAGGCACGTGACCCAGCTGGATGTGCGTGACAACGGGCTGGAGGAGCTGGATGCCTCCCTGTTCCCACGCCTGGAGGTCCTCCACTGTGAGAGGAACCACATCGCCACCCTCAAGGTCAAGGGCTCCGTGCTCAAAGCCATCTACGCACAGAACAACGAACTACGGGAGCTGGAGGTCAGCCCAGTGCCCTCCACACTCACCTACATGGACATCTCCAGgaatcGTATGGAGGCCGTCCCAGAGTGGCTGTGTGAGATTAAGAAACTAGAAGTTCTGGACATTAGCCACAACCTCGTTACTGAGCTCCCAGCACGGTTGCTGTGTAGCAGCAGTCTGAGGAAGCTGAGTGCAGGACACAACCACCTGCAGAAGCTGCCTGAGAGAGTAGAGCGCCCACTACTGGAGGTGTTGGACGTACAACACAACCAGCTGGCAGAGCTGCCCTGCAACCTCTTCCTCAAATCTGACAGTTTACGGTGCCTGAATGCCTCAGCCAATAAGCTGGAGCACCTGCCTCCCTCCAGCCTATCAGAGGAAAGCAACAGCGTCCTACAGGAACTGTACCTCACCAACAACCGTCTGACTGATAAGTGTGTTCCCTTGCTGACgggacacacacacctcagagtACTACACATGGCCTACAACTACCTGCACACCTTCCCTGCCAGTAAAATGGCCaagctggaggagctggaggagctggACCTGAGTGGGAACAGGCTGAAGACGGTGCCCACCACCATCATGAACCTCagacgcatgcacacactcatCGCCCACTCCAACACCATAGAGGTCTTCCCCGAGGTCATGCAGCTTATGGAGATGAAGtGTGTAGATCTGAGCTGTAATGAGCTGAGTGAGATCAGCCTGCCTGAGAACCTGCCTCCTAAACTCCAGGAGCTGGACCTGACAGGCAACCCTCGTCTCAACCTGGACCACAACACCCTGGAACATCTCAATAACATTCGCTGTTTCCGCATCGACCCGCCCCCGACCTTCTCAGCCAATGAGGCGTCGGGTGGGCCGGCTGTGTGGAGTCATGGTTACACAGAGGCCTCGGGCGTCAAGAACAAgctGTGTGTGGCCGCCCTGTCGGTGAACAGTTTCTGTGGGAGTCGTGAGGCCCTGTATGGAGTGTTTGATGGAGACAAGAACGTGGAAGTGCCCTACCTGCTGCAGTGTACCATGAACGACGTGCTGGCCGAAGAGCTACACAAGACCAAGAGTGAAGAAGAACATATGACCAACACTTTCCTCGTCATGCAGAGGAAACTGGGTACGGCAGGGCAGAAGCTGGGTGGCTCGGCAGCCCTGTGCCACATCAGACACGACCCCACCGACCCAGGCGGCTGCTTCACCCTCACCGCTGCCAACGTAGGCAAGTGCCAGGCCATCCTGTGTCGCGACGGCAAACCACTGCCCCTCTCCCTGCTGCACAGCGTAGGCCTGGAGGAAGAGTACCGACGCATCAGACAACACAACGCCATCATCACTGAGGACAACAAGGTGAATGGAGTGACAGACTCCACCCGCATCATGGGCTACTCCTTCCTGTACCCTGCGGTGATCCCACGGCCCTACGTCTCCAAGGTAACCCTCACCCCGCAGGACGAGTTCTTCATCCTGGGCAGCCGGGGATTGTGGGATGCTCTGTCGCAGTCGGAGGCGGTGGAGGCTGTTCGTAACGTCCCAGACGGCCTGGCTGCAGCCAAGAAGCTGTGTACGCTGGCCCAGGGCTACGGCTGCACTGACAGTCTCTGTGCCGTGGTGGTCCAGCTTTCTGTGAGCGAggactgctgctcctgctgctgcagcgacgctccccagcCGCCCCCCAGCCCCGGCCTGGGCGGCTACCCCTCCTCGGGGGGTTCGTCGATAAAGGAGCGGCCCTCAGGGGACGGCTCCCTCCCGGTGCCTCCGTCGTCTTGTAGCGAGATAAGCAGTGAGATCAGTACTAGTGAGATGAGCAGCGAGGTGGGATCCACAGCCTCCTCTGACGAGCCTCCCCAGAGCTCCCTGGTGCTGCTGCATGAacagccccaccaccaccagctcCACCTGCACCACCAGGCCAACCAGCTCTCCCTCCAGGCCCAGCACGCCGCCCAGCCCTGCCCATACCCGCACCCAGGCTCAGAGCTCCCTGCCCGGGGCTGCTGTTCACTCCACCCTGCCTGTCTGAGCGGCTCCTTCCAGAGGCAGCTGTCCAGTGCCACCTTCTCCAGCGCGCTGTCTGACAACGGGCTGGACAGTGAGGATGAGGAGCCCATCGCCGGGGTCTTCTCCAACGGGAGCAGAGTGGAGGTGGAGGCCGACATCCACTGCCTTAGGGCTGAggcctcttcatcatcatcatccggATGGGAACGCCTGCtgtcccctcctccacctcctccaccctgcACCCCGGAACCACTGGAGGAAGGGGTGGAGCTGACCTTGGGGGAGGCGGAGacaagggagcagagagaggagggctggtcaGTGGGGTCTGGCAGAAAGGGTGATGATGGGAAGACCCTGGGCAAGAGGAGGGGGAATGGCTCCGTGGCCCCTCAGGAGAAGAGCCACAACCTGATCGAGGTGGCAGCAGACGCCCCTTCTAAGAAGGGCGGAGGGTACTTCACAGCCCCCGCCCAGCCCGACCCGGACGACCAGTTCATCATCCCTCCAGAGCTGGAGGAGGAAGTCAAGGAGATCATGAAGCAGCATCAGCAGAAACAACAGAAAGCACCTAGCCCCGACCAGCCTGCAGACTACTACGACACACCCCTCTGAGCAGACACACCCCCTTACTGCAGTCTACTACAACCCTCCACTATGTTCCTGCAGACTACTAGGACACACCCCTGATAAATCCCTACAGAGTCTGCAGACTAGCTGAGTAACCTATGTATCTGAAAAACAGCACCTTGTTGAGCAGTCAGACTACAAGCGCTCAACCCGTTCCTGAGACCACATCACTGGAGTACCATGCACTGTAACCTGCTCCACCCCTTTCCCCAAAATGGCCTATAGGATAGTTCCACTACTACTCAGACTATACTGGATGTTGTTTTTACATTAGACAATAAACCTCTGAGTACCAATGTAATCAACACTAGTCTCTCTGCAATAGGGTTAGCCTACCACAACACACAGTTCATATGGATAATATGATtacagtttttttgttttttttacttacCATATCTTTTAATGTGAAGAAAATTAAGTTACTTTTTAAAAATGAAACACGGAGACACAATCTTATTATCAATGAAATACATTTGAAATGGTACACACCAATATTAACACGCTTAACTTTTGTAGATAGGGCACTTAATGATACTGTGTTTTTTCAGTAAATCCTGGCTCTTGGCCTGTAAAAAGGCATAGAAATTTTTGTAGAAATTTGAAAGACTAACTCCTAGGAGTTGCATACTCTTTATGGTGACCTAGTCACTTTTACTAATCTTCTCTGAGAGAAATTGTGATTTATTTTTTTTCCAATGATTGTAAATAAGAGAAATGTATGCTGACGCTTTTAAAGGAACTGTGTACCCATATGTCTGTGGATGgatttagtggtgtggaggggatGTGGGTCAGACCAGATTTAGCCATTATGAAGAGCTCACTTTCCTTTCTCTCCTAGacatacatacagagagagatatgctcaatgcacacacacacactgttatacAGTACAAGCACACACAGTTCACAGTGGTTCTTCTCTTTCAGTTCTGTCTTATATCTTGGTTATAGTCAGCAGTCCTGCTAGTGtgctcacaacacacacacacagtagaatacatacacacagtattccctcccacctccctcctaACTGTTATCACCAGCATGACTGTGTCCAGTTCAGTAATGCAAACAAATTCTATATCCACATGGAAAGTAAACCACACAAACGTTCCTGTCTTTGGTATAATAAATCTTACATTTGTGAATATAA

Function

NR:

description
PH domain leucine-rich repeat protein phosphatase 1-like

GO: NA

KEGG:

id description
K16340 PHLPP; PH domain and leucine-rich repeat-containing protein phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589282.2 True 6773 mRNA 0.53 17 15621664 15700456

Neighbor

gene id symbol gene type direction distance location
LOC110508170 LOC106599728 coding downstream 66170 15551688 ~ 15555494 (-)
irf-10 LOC106569155 coding downstream 118705 15486073 ~ 15502959 (-)
LOC110508624 LOC106599739 coding downstream 279865 15339285 ~ 15341799 (-)
LOC110508623 LOC106599911 coding downstream 286297 15332267 ~ 15335367 (-)
LOC110508622 LOC106599742 coding downstream 305728 15313703 ~ 15315936 (-)
LOC110508627 LOC106599725 coding upstream 2877 15703333 ~ 15793545 (-)
LOC110508632 igfbp-3b2 coding upstream 207986 15908442 ~ 15920850 (-)
LOC110508633 LOC106599720 coding upstream 233729 15934185 ~ 16017950 (-)
LOC110508634 LOC106569165 coding upstream 328662 16029118 ~ 16054346 (-)
LOC110508637 LOC106599711 coding upstream 442707 16143163 ~ 16151757 (-)
G2109711 NA non-coding downstream 13079 15608291 ~ 15608585 (-)
G2109709 NA non-coding downstream 14449 15606917 ~ 15607215 (-)
G2109704 NA non-coding downstream 20086 15601346 ~ 15601578 (-)
G2109700 NA non-coding downstream 24724 15596729 ~ 15596940 (-)
G2109684 NA non-coding downstream 44824 15576625 ~ 15576840 (-)
G2109810 NA non-coding upstream 100452 15800908 ~ 15801413 (-)
G2109929 adcy1 non-coding upstream 191535 15891991 ~ 15892732 (-)
G2110030 NA non-coding upstream 204502 15904958 ~ 15906123 (-)
G2110052 NA non-coding upstream 247379 15947835 ~ 15948246 (-)
G2109705 NA other downstream 17201 15603685 ~ 15604463 (-)
G2109663 LOC106599735 other downstream 66767 15539768 ~ 15554897 (-)
G2105419 LOC104953893 other downstream 4121592 11499126 ~ 11500072 (-)
LOC110508522 NA other downstream 4727584 10886198 ~ 10894141 (-)
G2103920 NA other downstream 4913165 10708012 ~ 10708499 (-)
G2110939 NA other upstream 1098934 16799390 ~ 16799869 (-)
LOC110508646 LOC106599672 other upstream 1555752 17254319 ~ 17260420 (-)
G2112905 NA other upstream 2760718 18461174 ~ 18461538 (-)
G2112922 NA other upstream 2799085 18499541 ~ 18499966 (-)

Expression


Co-expression Network