LOC110508632 (igfbp-3b2)


Basic Information

Item Value
gene id LOC110508632
gene name igfbp-3b2
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 15908442 ~ 15920850 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589287.2
GACGATAAATCCAAAGGGGCTTCATTTGTATGAAATGCAAAGTTAAATTCAGGACAATACGCACCAAGACCCTTCTGATATCATCACCATGGAGACATGTTTTCGCAGACTTTGGATGACAGTTGTTCTGGCATCGATTATGCGGAGATCAGTCGCGGTAGGACCGGTTATCCGGTGCGAACCATGTGATGCTGGAGCCCGGATACTGTGCAAGCCGTTGCCCAAGGACTGCGCGGAGAGAGTTCGCGAACCGGGCTGCGGGTGCTGCACGACTTGCGCGCTGGCCTTTGGAAAGCCGTGTGGAGTGTACACGGGGAGATGTGGCTCCGGAATGACATGCCAGCACCAACCCGGCGAGACGAAACCTCTCCAAGCTCTGCTGGAAGGACGAGGGCAGTGTGCAAACGCGACCATTAAAAGACCTGTTGCCACTTTAATCAATGAGAGACAAGAGAATGATGGTGGTATTCAGGAGGAGGAGCGAAACACCACCGCCCCAGTGCTCCAAGCCTCCTTCAGCACCAGCAGACCTCCTGTAGGCTCCCCCAGAATCCCCcatcacccccctctcctccaccccgtCAAGGCAGAGGTCATCCGCAGGGAGCAGCTGAAGAGGGCCCAGAGTTACAAGATGGAGCAAGGCCCTGGAGCTCTCAGCACAGACCAACATAACTTTTCCCTGGAATCCAAGCAGGACCCAGAGTATGGTCCCTGTCGTAGGGAGATGGAGAGTATCCTCAATGGACTGAAGATCACAGACATCCTCAACCCCAGAGGCTTCCGCATCCCAAACTGTGACAAGAAGGGCTTCTACAAGAAAAAACAGTGCCGTCCATCCAAGGGCAGAAAGCGAGGGTTTTGCTGGTGTGCCGATAAGTATGGGCAGCCATTGCCAGGTTTCgacgggaaggagagaggagaagctcAGTGCTACAACTCAGAGAGCCAATAAGACAAGAGCAGCgagaaagagccagagagagagagagaaatacacagaGAAACTGAGGATATCGGGATTCCAAAATTATTCCAAAATGGCTGGGCCTGGACATGTGTTGGCTGGCATTGATGACTCTTTGGCACATGGGACCTTATGGAGGGCAGAGCATGGGGAGTGGCTTGAGAAGAAGACATCCAATCACACTCCTTGCTTCCTCCTATGCTATGTGCTGCTCCTATGTACTGTAAACAGGGTGTGGGTGGATTCTCCATAGACTGAAAGGGCAGACCAGACTTGGTATATGTAACTCTAAGGACACATGAGACGTAATCATTCATTCCATAGCACAGGGCTAGCTTTGATGATTACCGACTTGACGACAGAGGATCATATACAATACTTGTCTCGACCCTCAATGAGAGGCGTACACCAACGCACAGCTAGGTGGCACTATAcccatgtgtgtgcgtgtttgtatgGCTGCATGATATGAttatatttgtatgtgtgtgtggttctgtatgtttgatatgttactgtatgtatttgtttaaatgtgtgtgtttgcgtgtgtctgtgtgtacaatACAAGAGTGTCTCTTTGTCTATCCGTGTAACTGTATGCTGTGGGGTGCTGGTGTGCGACCACCCTGTGGCACAGTACAATGTCATAAAATGCTTTCCCACTTTGTGCCGGAGGGTACATAACTCAGATTTTAGTCCATTCGGTATCTCTCTGTAGGATCATTGTCCTCTCCTCAGGACCTTTTAAGGGAGTTGACTATAAAGCTTGGATGTTGTTCTCACCTATCCTTTGCAACTCATATACACTGTGTACCAaactttaggaacacctgctcgttCCATGAtgtggactgaccaggtgaatccaggtgaaagctacgagccattattgatgtcacttgataaatccacttccatcagtgtagatgatgggggggagga
>TU2413153
ACACGGGGAGATGTGGCTCCGGAATGACATGCCAGCACCAACCCGGCGAGACGAAACCTCTCCAAGCTCTGCTGGAAGGACGAGGGCAGTGTGCAAACGCGACCATTAAAAGACCTGTTGCCACTTTAATCAATGAGAGACAAGAGAATGATGGTGGTATTCAGGAGGAGGAGCGAAACACCACCGCCCCAGTGCTCCAAGCCTCCTTCAGCACCAGCAGACCTCCTGTAGGCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589287.2 False 1912 mRNA 0.50 4 15908442 15920850
TU2413153 True 234 lncRNA 0.56 2 15918854 15920542

Neighbor

gene id symbol gene type direction distance location
LOC110508627 LOC106599725 coding downstream 114897 15703333 ~ 15793545 (-)
LOC110508626 LOC106599727 coding downstream 207986 15621664 ~ 15700456 (-)
LOC110508170 LOC106599728 coding downstream 352948 15551688 ~ 15555494 (-)
irf-10 LOC106569155 coding downstream 405483 15486073 ~ 15502959 (-)
LOC110508624 LOC106599739 coding downstream 566643 15339285 ~ 15341799 (-)
LOC110508633 LOC106599720 coding upstream 13335 15934185 ~ 16017950 (-)
LOC110508634 LOC106569165 coding upstream 108268 16029118 ~ 16054346 (-)
LOC110508637 LOC106599711 coding upstream 222313 16143163 ~ 16151757 (-)
LOC110508642 NA coding upstream 898436 16819286 ~ 16828277 (-)
LOC110508644 LOC106599691 coding upstream 968682 16889532 ~ 16901564 (-)
G2110030 NA non-coding downstream 2319 15904958 ~ 15906123 (-)
G2109929 adcy1 non-coding downstream 15710 15891991 ~ 15892732 (-)
G2109810 NA non-coding downstream 107029 15800908 ~ 15801413 (-)
G2109711 NA non-coding downstream 299857 15608291 ~ 15608585 (-)
G2109709 NA non-coding downstream 301227 15606917 ~ 15607215 (-)
G2110052 NA non-coding upstream 26985 15947835 ~ 15948246 (-)
G2110058 NA non-coding upstream 38087 15958937 ~ 15959190 (-)
G2110061 NA non-coding upstream 39806 15960656 ~ 15960863 (-)
G2110066 NA non-coding upstream 83477 16004327 ~ 16059828 (-)
G2110091 NA non-coding upstream 145558 16066408 ~ 16066626 (-)
G2109705 NA other downstream 303979 15603685 ~ 15604463 (-)
G2109663 LOC106599735 other downstream 353545 15539768 ~ 15554897 (-)
G2105419 LOC104953893 other downstream 4408370 11499126 ~ 11500072 (-)
LOC110508522 NA other downstream 5014362 10886198 ~ 10894141 (-)
G2110939 NA other upstream 878540 16799390 ~ 16799869 (-)
LOC110508646 LOC106599672 other upstream 1335358 17254319 ~ 17260420 (-)
G2112905 NA other upstream 2540324 18461174 ~ 18461538 (-)
G2112922 NA other upstream 2578691 18499541 ~ 18499966 (-)
G2113211 NA other upstream 2736703 18657553 ~ 18659728 (-)

Expression


Co-expression Network