Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110508636 |
| gene name | tbb2a |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 16133508 ~ 16139752 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tubulin beta-2A chain |
| id | name | namespace |
|---|---|---|
| GO:0007017 | microtubule-based process | biological_process |
| GO:0051258 | protein polymerization | biological_process |
| GO:0006184 | obsolete GTP catabolic process | biological_process |
| GO:0005874 | microtubule | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0003924 | GTPase activity | molecular_function |
| GO:0005525 | GTP binding | molecular_function |
| GO:0005200 | structural constituent of cytoskeleton | molecular_function |
| id | description |
|---|---|
| K07375 | TUBB; tubulin beta |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021589297.2 | True | 1867 | mRNA | 0.53 | 4 | 16133508 | 16139752 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508635 | LOC106599714 | coding | upstream | 945 | 16073550 ~ 16132563 (+) |
| LOC110508631 | igfbp-1b2 | coding | upstream | 229847 | 15900655 ~ 15903661 (+) |
| LOC110508629 | LOC106599721 | coding | upstream | 237340 | 15831164 ~ 15896168 (+) |
| LOC110508628 | LOC106599723 | coding | upstream | 332152 | 15793809 ~ 15801356 (+) |
| LOC110508625 | LOC106599735 | coding | upstream | 592843 | 15519330 ~ 15540665 (+) |
| LOC110508638 | LOC106599708 | coding | downstream | 30274 | 16170026 ~ 16193127 (+) |
| LOC110508172 | NA | coding | downstream | 155592 | 16295344 ~ 16296279 (+) |
| LOC110508639 | LOC106599706 | coding | downstream | 318460 | 16458212 ~ 16541579 (+) |
| LOC110508278 | LOC106599701 | coding | downstream | 669719 | 16809471 ~ 16813125 (+) |
| LOC110508640 | LOC106599692 | coding | downstream | 684507 | 16824259 ~ 16839283 (+) |
| G2110098 | NA | non-coding | upstream | 63118 | 16070185 ~ 16070390 (+) |
| G2110097 | NA | non-coding | upstream | 63993 | 16069256 ~ 16069515 (+) |
| G2109984 | NA | non-coding | upstream | 146750 | 15986333 ~ 15986758 (+) |
| G2109983 | NA | non-coding | upstream | 147470 | 15985791 ~ 15986038 (+) |
| G2109979 | LOC106599720 | non-coding | upstream | 156560 | 15975390 ~ 15976948 (+) |
| G2110101 | LOC106599711 | non-coding | downstream | 3416 | 16143168 ~ 16145209 (+) |
| G2110278 | NA | non-coding | downstream | 130647 | 16270399 ~ 16270613 (+) |
| G2110432 | NA | non-coding | downstream | 262731 | 16402483 ~ 16402721 (+) |
| G2110495 | NA | non-coding | downstream | 301388 | 16441140 ~ 16441357 (+) |
| G2110502 | NA | non-coding | downstream | 305512 | 16445264 ~ 16445623 (+) |
| G2109955 | LOC106599720 | other | upstream | 184647 | 15948308 ~ 15948861 (+) |
| G2109948 | NA | other | upstream | 194651 | 15938511 ~ 15938857 (+) |
| G2107033 | NA | other | upstream | 2220281 | 13911427 ~ 13913227 (+) |
| G2106557 | NA | other | upstream | 2989913 | 13143313 ~ 13143595 (+) |
| G2106549 | NA | other | upstream | 2999023 | 13133894 ~ 13134485 (+) |
| G2110507 | LOC107717027 | other | downstream | 308360 | 16448112 ~ 16448502 (+) |
| G2111044 | NA | other | downstream | 814032 | 16953784 ~ 16958852 (+) |
| G2111300 | NA | other | downstream | 1271392 | 17411144 ~ 17416232 (+) |
| G2111457 | NA | other | downstream | 1568504 | 17708256 ~ 17708629 (+) |
