fitm1l (LOC106599271)


Basic Information

Item Value
gene id fitm1l
gene name LOC106599271
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 18372653 ~ 18375659 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589357.2
AACTGGGAGAGTATTTGGGAGCTCTAGCGCTTACTATAATCAAATATCGTTGCACAACTTCACACTGCTTATAATGAGTTGAAAGATATTATAAACAAAGTGCGTACTCAGCATTAATGTAGTTTTTTTTTGGAATGCACACAAATACCACAATAATCACATTAACACAGTAACAGACGAATCACATTAACAGTGGGGTACTTGCTGATTCACTCAATACATTCTGTAACCCCTTAAAACGTTGTAAAAGTAATGTGACACCTGCAACGGAGGGATTTTCCAAAGGCGAGAACATATGTCCCACACTGTCGGTGTGGATGAAAGGGTGAATGGGTGGAGTGAGACGGGAGCTGAGGGGATGTGGGACAGAGGAATCTCTAACTTCAGCTCTAACAGTTGGACTTTACGGTTTACTGTTTGAGCACAAGGACAACGAACACGCCATTGTGGATTAGCATATTTTTTAATGCTGCATGAGCAAGAGGTGGGCCGTTACCTCAGCAATAACAGGAAGAACAGTGGCAACACGTGGAAGTAAATCCAAAGTGGAAACCTAGTCAAGGTCAGACAAGGCAGGATTAAAATATTCTTCAACTGTGGAAAACTGCAAGATATTGAATAACAAATTAAGTGCAACATTTGTAGAAATGGGATGTACCAACTGTGTTGGATACAGGAGATGAACAACTGGATTTGTGCACATTCAAATAAGTGAGCTTCTGAAAGTCAGAACACCTGCCACTTTAAGACATCTACACATGAAGAGTTGAATGTCAAAAACTTGCAGAAGATTGCATCTCGATTGAATTACCAAACCTTTGGATTGATTCAATGAAAAGTGATTTACACCAACTGAAGGTATTGCTTTTAGATTATAACATGCAGGATTGGTCAGTCACACGGGCATAGTAAGCAATACAGAAACAACAACCTACAGGATCATTGGATACACACATGAACTATAGGGTATAGTTTTAAAGCCAGAGGAAGAGATAAAAGCTTCATTATTGTTTCGGTTGAGGCTAGATTTAGTCAGTTGAGATGTTTCTCAATACCCTTCTGGTGGTCTTGACTGACCTGGCAGCCGGACTCATGGGAAGTGCCAATTTCCGCCGCCATTTTCACCTGTTCTTGTCAGGCCTGATTATGTTTGGACCTGCCCTGAGCATGTGGGTCTCCCAACACAGCATCTTTGCCAAAAGGACAAATTTTCTTTACAGAGCATTCCTGCGCTCAGGCTGGGGATGGACCTGCATCTTCGTCGGCTCCTTTGTCTTCCTCCTTTCCTTCTCAGTGCGCAGATCCCTCGTTCTCTCACTGCGACACCTGTCCAGGCTGGTGGTGGCAGGCGTGCTGTGGGTGGGGTTCCGAAAGCTTCTGGATGTCCTTGAGAACGCCACAGGGAGCTGCTACGAGCCCCTCAGCGCGGTAGATGGCCAGCCCACGGTGGACGGCCAGCCCTTCCTACTACTTCGGGAGGGGGCGAGCAAACAGTTGTGTGTGGGAAACGGCATGCTGTGGCGTGGCTATGAGGTCTCTGAGGACATCTTCTTGCTGTGTCTGTGCTGCCTGCTGGTGGCAGAGGAGACGGCCGTGTTCGGGCCCTACCTGACTCTGGGTGGGCCCTCGGGGGCCCCGCTGCGCCTGCTCTTCCTGTTCTGTGTCACTCTGCTAGGCCTCTGGATGTTCTTGCTTCTCTGCCTGCTGGCTTACTTCCCCGCATTCCCCACACAGATCTTAGGAGGGGCTCTGGGGTGTCTTAGTTGGAGGGGCCTGTATCAGGGCTGGTACCGCCTGGGCCCCAGCTGGTACTGTCCTGGACGACCAGGGGTGGGACTCTTCACCACGAAGGAAGGGGGGAAGCCTGAGTGAAAGAACGAGAGGAATGGTTATAGGCATAAACACACCTCATTAAACTTAGACACGAAGCTAATGAATGTGATGTCCTTTTCAGGAACGAATTAGGGGCTAATTAAACCCTGTACAGAATTTTAAGTCATTTTAACTGATGTCACCTATCATAAAGTTATTGTACTtgataaaaaatatttgtttgtgaACTTGTCTACAAGCAGTTTTATGATAAATAAAATTCTTCATACAATTCGA

Function

NR:

description
fat storage-inducing transmembrane protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589357.2 True 2109 mRNA 0.46 2 18372653 18375659

Neighbor

gene id symbol gene type direction distance location
cdc20 cdc20 coding downstream 6658 18361064 ~ 18365995 (-)
LOC110508660 LOC105019197 coding downstream 71669 18295288 ~ 18300984 (-)
LOC118944819 LOC106599263 coding downstream 149808 18215198 ~ 18222845 (-)
LOC110508659 LOC106599263 coding downstream 157582 18190804 ~ 18215071 (-)
LOC110508658 LOC106599262 coding downstream 197081 18102546 ~ 18175572 (-)
LOC110508665 LOC106599272 coding upstream 53165 18428824 ~ 18481333 (-)
LOC110508666 LOC106599276 coding upstream 108686 18484345 ~ 18517197 (-)
LOC110508670 LOC106599287 coding upstream 462654 18838313 ~ 18849139 (-)
LOC110508671 LOC106599289 coding upstream 489180 18864839 ~ 18879323 (-)
LOC110508176 LOC106599291 coding upstream 505031 18880690 ~ 18927013 (-)
G2112605 NA non-coding downstream 140660 18231609 ~ 18231993 (-)
G2112604 gs04 non-coding downstream 144002 18167839 ~ 18228651 (-)
G2112324 NA non-coding downstream 419584 17949564 ~ 17953069 (-)
G2112879 NA non-coding upstream 6574 18382233 ~ 18382467 (-)
G2112880 NA non-coding upstream 6953 18382612 ~ 18382899 (-)
G2112888 NA non-coding upstream 15604 18391263 ~ 18391594 (-)
G2112892 NA non-coding upstream 20633 18396292 ~ 18396515 (-)
G2112867 LOC105009935 non-coding upstream 37903 18413562 ~ 18420017 (-)
LOC110508646 LOC106599672 other downstream 1115258 17254319 ~ 17260420 (-)
G2110939 NA other downstream 1572784 16799390 ~ 16799869 (-)
LOC110508627 LOC106599725 other downstream 2661724 15703333 ~ 15793545 (-)
G2109705 NA other downstream 2768190 15603685 ~ 15604463 (-)
G2109663 LOC106599735 other downstream 2817756 15539768 ~ 15554897 (-)
G2112905 NA other upstream 85515 18461174 ~ 18461538 (-)
G2112922 NA other upstream 123882 18499541 ~ 18499966 (-)
G2113211 NA other upstream 281894 18657553 ~ 18659728 (-)
G2113287 NA other upstream 366259 18741918 ~ 18742284 (-)
G2113320 LOC100194703 other upstream 409238 18784897 ~ 18785322 (-)

Expression


Co-expression Network