LOC100136150 (LOC105009935)


Basic Information

Item Value
gene id LOC100136150
gene name LOC105009935
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 18406183 ~ 18420007 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589358.2
ACACAATAACATTCCTGGCCCCTGAGATGCATATCCATATTTGGCAGAAAGGCTTCATTTATAAAGAGGACACATGGTCTGGACCACAATAGGCCACCATACTACTGCAAGGACCATTACCTCCATCAGTCATCATAAAGGGGTTGGTGTGaCACAGTAAATCATGGGAGACGCTCATATGGCAGAGTTCGGGCCCGCAGCCCCTTACTTGAGGAAGTCAGACAGGGAGCGTCTGGAGGCCCAGACCCGTCCCTTCGACATGAAGAAGGAATGCTTTGTGCCTGACACCGAAGTGGAATTTGTGAAGGCTTCCATCACCAGCAGAGATGGTGACAAAGTCACCGCTGACACTGCGAATGGGAAGACTGTGACCGTGAAGGACTGTGATGTCCACCCTCAGAACCCGCCAAAGTTTGATAAAATTGAAGACATGGCGATGTTTACCTTCCTTCATGAGCCAGCTGTGCTGTTCAACCTCAAAGAGCGTTATGCAGCATGGATGATCTACACCTACTCCGGGCTGTTCTGTGTCACTGTCAACCCCTACAAGTGGCTGCCAGTATATAACCAGGAGGTGGTCTCAGCCTACAGAGGCAAGAAGAGGAGTGAAGCTCCTCCTCACATCTTTTCTATCTCCGATAACGCCTATCAGTACATGCTGACAGACAGGGAGAACCAATCCATTCTTATCACCGGAGAATCTGGTGCTGGGAAGACTGTCAACACCAAGAGAGTCATTCAATACTACGCCAGTATTGCAGCTGTAGGAGGAAAGAAGGACACAGCCTCTGAGAAAAAGGGGACTTTGGAGGATCAAATCATCCAGGCTAACCCAGCTCTGGAGGCATTTGGTAACGCCAAGACCATTAGAAATGACAACTCTTCAAGATTCGGCAAATTCATCCGAATTCATTTTGCTGCTAGTGGAAAGCTAGCCTCCGCAGACATTGAGACCTATCTGTTAGAGAAGTCCCGTGTGACTTTCCAGCTCAAGGCTGAGAGAGACTATCACATTTTCTACCAGATTCTGTCCCAAAGGAAACCAGAGTTGCTCGAGATGATGCTCATCACCAACAACCCCTATGACTACCAATTCATCTCCCAAGGAGAGACAACTGTAGCCTCCATCGACGATGGTGATGAGTTGTGTGCCACTGATGAAGCTTTTGATGTCCTGGGCTTCACTCAGGAGGAGAAGAATGGCATATACAAGCTGACTGGTGCTATCATGCACTATGGCAACATGAAGTTCAAGCTGAAACAGCGCGAGGAGCAGGCAGAGGCTGATGGCACTGAGGATGCTGACAAAGTGTCATATCTGATGGGCCTGAACTCTGCTGACCTCATCAAGGGTCTCTGTCACCCAAGGGTCAAAGTAGGGAACGAGTGGGTCACCAAGGGGCAAACTGTCCAACAGGTGAACTATTCCATTGGTGCACTGTCAAAGTCAGTGTATGAAAAGATGTTCCTCTGGATGGTGGTGAGAATCAACCAATCCTTGGACACCAAGCAGCCTCGCCAGTACTTCATTGGTGTATTGGACATCGCTGGGTTTGAGATCTTTGATTACAACACCTTCGAGCAGCTCTGCATCAACTTCACCAATGAAAAGCTGCAACAgtttttcaaccaccacatgtttgTGCTGGAGCAAGAGGAGTACAAGAAAGAGGGAATTGAGTGGGAGTTCATTGACTTTGGCATGGACTTGCAGGCTTGCATTGACCTTATTGAAAAGCCAATGGGTATCATGTCCATCCTTGAAGAGGAGTGCATGTTCCCCAAGGCCAGCGATGCTACCTTTAAATCCAAGCTTTACGACAACCATCTTGGAAAATCCAACAACTTCCAGAAGCCCAGGCTTATGAAAGGGAAACCAGAGGCTCATTTCTCCCTGATTCACTATGCTGGTACTGTGGACTACAATATTTTCAACTGGCTGGTAAAGAACAAGGATCCACTGAATGAGACTGTGGTCGGACTGTTCCAGAAGTCTAACCTCAAATTGTTGACCGTGCTCTTCCAGAATTATGCTGGAACAGATGCTGCTGATGATAGCAAGGCAAGTGGAAAGAAGAAGAAGGGATCATCCTTTCAGACTGTGTCTGCCTTGCACAGGGAAAACCTGAACAAGCTGATGACCAACTTGAGGTCCACTCACCCTCACTTTGTGCGCTGCATCATCCCCAATGAGACCAAGACTCCTGGGGCCATGGAGAATCCTCTGGTCATGCACCAGCTGCGCTGTAACGGTGTGCTGGAAGGCatcaggatctgcagaaaagGCTTCCCCAATAGGGTCCTGTATGGAGACTTCAAGCAGAGATACCGTATCCTGAATCCTGCTGCCATCCCCGAAGGACAGTTCATTGACAGCAAGAAAGGAGCTGAGAAATTACTTGGGTCTTTGGATATTGATCACACTCAATACAGATTTGGACACACTAAGGTGTTCTTCAAGGCTGGTCTACTTGGTCagctggaggagatgagagatgacCGTTTGTCCCTCATTATCACTGGAATCCAGTCCAGAGCACGCGGTCTGCTGGCTAGAGCTGAATTCCAGAAGATTGTTGAACGAAGAGATGCATTACTTGTGATCCAATGGAATGTACGTGCCTTCATGGGGGTCAAGAATTGGCCCTGGATGAAGCTATTCTTTAAGATCAAGCCTCTGCTGAAATCTGCTGAGTCTGAGAAGGAGATGGCCAACATGAAGGAAGAGTTCTTGAAGCTGAAAGAGGCTTATGCTAAGTCTGAGGCTCGCAGGAAGGAACTAGAGGAGAAAATGGTCTCTCTTCTCCAAGAGAAAAATGACTTACAGCTTTCAGTTCAGGCGGAGCAAGATAATCTTTGCGATGCTGAGGAAAGATGTGAACAACTGATCAAACACAAGATTCAGTTGGAAGCTAAATCCAAAGAGCTGACTGAGAGactggaggatgaagaggagatgaATGCAGAACTGACCGCCAAGAAGAGGAAACTGGAGGACGAGTGCTCTGAGATAAAGAAGGACATTGATGACCTGGAGCTCACTCTGGCTAAAGTGGAGAAGGAGAAGCACGCCACAGAGAACAAGGTGAAGAACCTGACTGAGGAAATGGCAGCTCTGGATGAAATCATTGCCAAGCTGACCAAGGAGAAGAAAGCTCTCCAGGAGGCTCATCAGCAAACACTGGACGACCTGCAGAGTGAGGAAGACAAAGTCAACACTCTAACAAAGGCAAAGGCTAAGCTGGAGCAACAAGTTGATGACCTTGAGGGTTCTCTGGAGCAAGAGAAGAAGGTCCGTATGGATCTTGAAAGAGCCAAGAGGAAGCTCGAGGGAGACTTGAAGTTGACCCAGGAAAGTCTAATGGACCTGGAGAATGATAAACAGCAACTAGAGGAACGTCTTAAGaaGAAAGACTTTGAGGTCAGCCAGCTGAACAGTAAAATAGAAGATGAGCAAGCAGCTAACATTCAGCTGCAGAAGAAACTAAAGGAGCTTCAGGCTCGTATTGAGGAGCTGGAGGAAGAGCTCGAGGCAGAAAGAGCTGCCCGAGCCAAGGTGGAGAAGCAAAGAGCAGACTTGGCCAGAGAGCTGGAGGACATCAGTGAGAGGCTGGAGGAGGCTGGTGGAGCCACATCTGTCCAGATTGAGATGAACAAGAAGAGGGAGAATGAGTTCCTGAAGCTCCGCAGAGACCTTGAAGAGGCCACTCTGCAGCACGAGGCTACAGCTGCCACACTCAGGAAAAAACAAGCTGACAGTGTCGCTGACCTTGGGGAACAAATAGACAACTTGCAGAGAGTGAAGCAGAaactggagaaggagaagagcgaGCTCAGGCTTGAACTTGATGATGTTGTCTCCAACATGGAACATATTGTGAAGTCCAAGACCAATTTAGAGAAGGCATGCAGGACCTTGGAAGATCAGATGAGTGAATATCGGGCAAAGTATGAGGAGGGCATGCGCAGTATCAATGACTTCAGCATGTGTAAAGCTAGGCTGCAGACAGAGAATGGGGAGCTTTCCAGGCAGCTTGAGGAGAAGGACTCCCTTGTATCTCAGCTAAGTAGAGGGAAGCTGTCCTACACTCAGCAGATTGAGGACCTCAAACGACAACTGGAGGAGGAAACAAAGGCAAAGAATGCACTAGCCCATGCAGTGCAATCTGCTCGACATGATGGTGACCTGCTCCGAGAGCAGtatgaggaggagcaggaggccaAGGCTGAGCTGCAGCGTGGCATGTCCAAGGCTAACTCTGAGGTGGCTCAGTGGAGAACAAAGTACGAGACCGATGCCATTCAGAGGACTGAGGAGCTGGAGGAAGCCAAGAAGAAACTGGCTCAGCGTCTGCAGGATGCTGAAGAAGCTGTGGAGGCAGTGAACGCCAAGTGTTCCTCCCTGGAGAAGACCAAACACAGACTGCAGAATGAGATTGAAGATCTCATGGTGGATGTGGAACGGtctaatgctgctgctgctgctctggaCAAGAAACAAAGAAACTTTGACAAAGTTCTGTCTGAGTGGAAGCAGAAGTATGAGGAGTCTCAGTGTGAGCTAGAGAGCTCACAGAAAGAGGCTAGGTCTCTGAGCACTGAACTCTTCAAGCTGAAGAACTCCTATGAGGAAACTTTGGATCAGCTCGAGACAATGAAGAGGGAGAACAAGAACCTCCAAGAGGAGATTTCCGACCTTACTGAGCAACTTGGTGAAGGAGGAAAGAGCATCCACGAGCTGGAGAAAATAAGGAAACAGCTGGAACAGGAGAAAAGTGAGATCCAATCTGCTCTGGAGGAAGCTGAGGCTTCTCTGGAACATGAGGAGGGTAAGATTCTGAGAGCCCAGCTAGAGTTTAATCAGGTAAAGGCTGATATTGAGCGCAAGCTGACTGAGAAGGACGAGGAGATGGAGCAGTCCAAGAGGAATCTGCAGAGGGCCATTGATACCCTGCAGAGCTCTCTTGAGGCAGAGTGCCGGAGCAGGACTGAGGCCCTCAGACTGAAAAAGAAAATGGAGGGAGACCTCAATGAGATGGAAATCCAGCTCAGCCAATCCAACAGGCAGGCATCAGAGGCCCAGAAACAGCTAAAGAGTGTTCATGCTCATCTGAAGGATGCCCAACTCCAGTTAGATGACTCTCTTCGTTCCAATGATGATCTGAAGGAAAACATTGCCATTGTAGAGAGACGCAACAATCTGATGCAGGCAGAGCTGGAGGAGCTAAGAAGCTGTCTTGAACAGACTGAGAGAGGCCGCAAGCTAGCTGAGCAAGAGCTGCTGGACATCAGTGAGAGGGTGCAGTTGCTGCACTCACAGAACACCAGCCTGCTGAACCAAAAGAAGAAGCTGGAGAGCGACACAAACCAGCTTCAGACTGAGGTGGAGGAGGCAGTCCAGGAGTGCAGAAATGCTGAAGAAAAGGCCAAGAAGGCCATTACTGATGCTGCCATGATGGCAGAGGAGTTGAAGAAGGAGCAGGACACCAGTTCTCACCTGGAGCGAATGAAGAAGAACATGGAGCAGACCATCAAGGACCTGCAGCACCGCCTGGATGAGGCTGAACAAATCGCCATGAAGGGGGGCAAGAAGCAGGTTCAGAAGCTGGAGAACAGGGTGAGGGAGCTGGAGAATGAGGTCGAGGGTGAGCAGAAGAAGGGTGCTGATGCAATCAAAGGAATTCGGAAATATGAGAGGCGTATCAAGGAACTCACCTACCAGACTGATGAGGACCGCAAGAATATGACCCGCCTCCAAGACCTTGTGGATAAGCTGCAACTGAAAGTGAAAGCCTACAAGAGATCTGCCGAGGAAGCTGAGGAGCAAGCCAACAACCATCTGGGCAAGTTCCGCAAAATACAACATGAGCTGGACGAGGCTGAGGAAAGGGCCGACATCGCTGAGTCTCAGGTCAACAAGCTGCGTGCCAAGAGCCGTGATGTTGGTTCCAAGAAAGGGCACGATGAAGAGTGAAGCTCTCATATGGACCTCTGAAACCTTCTGCTGTGGTGAAGTCTATCCAAAGCCCTAAGTAACTCTGTAGAATAAAGTCAAATCGCaatcaga

Function

NR:

description
myosin-6

GO: NA

KEGG:

id description
K17751 MYH6_7; myosin heavy chain 6/7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589358.2 True 6067 mRNA 0.49 39 18406183 18420007

Neighbor

gene id symbol gene type direction distance location
LOC110508663 LOC106599269 coding upstream 35299 18366089 ~ 18370884 (+)
LOC110508661 LOC106599266 coding upstream 51440 18316616 ~ 18354743 (+)
gs04 gs04 coding upstream 177793 18225312 ~ 18228390 (+)
LOC110508657 LOC106599258 coding upstream 419316 17867728 ~ 17986867 (+)
LOC118944855 NA coding upstream 581461 17813849 ~ 17824722 (+)
LOC110508667 LOC106599281 coding downstream 159456 18579463 ~ 18658560 (+)
LOC110508668 LOC106599284 coding downstream 253295 18673302 ~ 18724171 (+)
LOC110508669 LOC106599285 coding downstream 306247 18726254 ~ 18816586 (+)
LOC110508672 NA coding downstream 429179 18849186 ~ 18865414 (+)
LOC110508675 LOC106599295 coding downstream 566690 18986697 ~ 19011641 (+)
G2112763 NA non-coding upstream 9628 18396138 ~ 18396555 (+)
G2112519 NA non-coding upstream 171777 18233827 ~ 18234406 (+)
G2112517 NA non-coding upstream 176101 18229850 ~ 18230082 (+)
G2112426 LOC106599262 non-coding upstream 296459 18108263 ~ 18109724 (+)
G2112396 NA non-coding upstream 323403 18080807 ~ 18082780 (+)
G2112765 NA non-coding downstream 8823 18428830 ~ 18435079 (+)
G2112958 NA non-coding downstream 125563 18545570 ~ 18545816 (+)
G2112960 NA non-coding downstream 126515 18546522 ~ 18546751 (+)
G2112964 NA non-coding downstream 131934 18551941 ~ 18552239 (+)
G2112974 NA non-coding downstream 137591 18557598 ~ 18557809 (+)
G2112127 NA other upstream 502259 17903198 ~ 17903924 (+)
G2111491 NA other upstream 650602 17754937 ~ 17755581 (+)
G2111457 NA other upstream 697554 17708256 ~ 17708629 (+)
G2111300 NA other upstream 989951 17411144 ~ 17416232 (+)
G2111044 NA other upstream 1447331 16953784 ~ 16958852 (+)
G2113059 NA other downstream 247108 18667115 ~ 18668496 (+)
G2113578 NA other downstream 656070 19076077 ~ 19076418 (+)
LOC110508695 LOC106599333 other downstream 1203461 19623468 ~ 19636825 (+)
G2115369 NA other downstream 2021726 20441733 ~ 20442169 (+)
LOC110508722 LOC106569260 other downstream 2420563 20840508 ~ 20842019 (+)

Expression


Co-expression Network