LOC110508178 (LOC106569286)


Basic Information

Item Value
gene id LOC110508178
gene name LOC106569286
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 19069035 ~ 19070878 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110508178
ATGGCAGCTGCCAACCCCATCGATGGGAGATACAACCACTTTAAGTCTCTGAAACAGAACGTCAACATGTCAGAACACATCATTTTCAGATTTGACCTCTTCGTCAATTTGATTGATGAGTGCAATGAGGTCAAGGAGTTGACGCACAAGCATCTGTGTCAGAGTGACAGCACCAAGCCAGCCTGGTGTATCATTGTCAGGCAGCTAGATAGCATGCTCCGACTGTCTGAGGGCATGGCCAGGCTCTACCGCTCAGATAATGACTTGATAGATGAGGCTGTGAAGGGGAGAAACGGCACTAATGGCCATCATGCAGAGGAGGCTATGGACATAGACCATGGGGCAGGCAGACCTGAGAAAAACAGCACTGCCAAGCCTGCTCTCAAAATGACCTTCGCTGAGTATTGGAGTGTCTCCAACCTCATCATTCTGCACATGCACAAGATGGATGATATTGACGAAGAGTCCTCACTGAAGAAGAGAAAGCTGATTTAACTGGTACCTGAAAGAGATGAAGAGTGAGATCGAGTCAGAAGCTGAGATGGTTGCCAAGAAGTATCTGATTGAGAAAGTGCTTCAGAGACGAATCCATTATGACCACATCATCATAGAGTTAACGAAGACTGGGCTGAAGAAAGTTGGTGTTGAGGGAGAGGACCCCTTCTTAGTGGTCAATGGCAATTACATCCTGGAAAACTAG

Function

NR:

description
PREDICTED: maternal DNA replication licensing factor mcm6-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110508178 True 700 mRNA 0.47 5 19069035 19070878

Neighbor

gene id symbol gene type direction distance location
LOC110508177 LOC106599299 coding downstream 1421 19029299 ~ 19067614 (-)
LOC118944890 LOC106599299 coding downstream 40179 19027368 ~ 19028856 (-)
LOC110508676 LOC106599297 coding downstream 43053 19015141 ~ 19025982 (-)
LOC118944847 NA coding downstream 103308 18958044 ~ 18966479 (-)
LOC110508673 LOC106599588 coding downstream 121847 18945248 ~ 18947188 (-)
LOC110508677 LOC106599302 coding upstream 10660 19081538 ~ 19095065 (-)
LOC110508678 LOC105024244 coding upstream 45204 19116082 ~ 19185326 (-)
sc61g NA coding upstream 122930 19193808 ~ 19197058 (-)
pkia NA coding upstream 138321 19209199 ~ 19255933 (-)
LOC110508682 LOC106599592 coding upstream 262189 19333067 ~ 19341851 (-)
G2113802 NA non-coding downstream 4747 19063997 ~ 19064288 (-)
G2113793 NA non-coding downstream 11938 19056632 ~ 19057097 (-)
G2113769 NA non-coding downstream 17987 19050472 ~ 19051048 (-)
G2113787 NA non-coding downstream 23883 19044454 ~ 19045152 (-)
G2113782 NA non-coding downstream 30765 19038035 ~ 19038270 (-)
G2113823 NA non-coding upstream 34409 19105287 ~ 19105610 (-)
G2113871 NA non-coding upstream 133179 19204057 ~ 19204256 (-)
G2113872 NA non-coding upstream 133966 19204844 ~ 19205108 (-)
G2113873 NA non-coding upstream 134311 19205189 ~ 19205400 (-)
G2113520 LOC106599295 other downstream 59370 19007232 ~ 19011635 (-)
G2113320 LOC100194703 other downstream 283713 18784897 ~ 18785322 (-)
G2113287 NA other downstream 326751 18741918 ~ 18742284 (-)
G2113211 NA other downstream 409307 18657553 ~ 18659728 (-)
G2115838 NA other upstream 1788262 20859140 ~ 20859530 (-)
G2117313 NA other upstream 2799807 21870685 ~ 21871053 (-)
mrps14 mrps14 other upstream 2802338 21873216 ~ 21876709 (-)
LOC110508740 kiaa0040 other upstream 2872103 21942981 ~ 21948557 (-)

Expression


Co-expression Network