pkia


Basic Information

Item Value
gene id pkia
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 19209199 ~ 19255933 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002471344.1
AGCAGAAAACCTGTCAATCAAGGAATGTAATGCAACGACTGGGGTTTTACATGTATAGTATTGATGCGCGTACAATAACCGTACATCGTATGTAAAGGCAATAGGCTATAAACCGATGTGAGTAGGCTATCTAAATCCAGATATTTACCTAGAGCGTAAATAATCCTGTGGGGTTTTGTAGTTGATCCGCGTCGCGTACGGTCAATTTGATTCCTTTGTAGGCCCACTAGACTAGATTCCCTTTGTCACTCGCTCAAAAATGTGGCACGGATTTTACAGTCGTAGGATGACAGATTACTCAAGTGTTGTGAATGACACTTGTTTCAGGAGTGGCTATGTGAACATGTGTCAGCGATGACCGAAGTTGAAGTGACGTATGCAGACTTCATAGCCTCCGGTAGAACTGGACGAAGGAATGCCCTGCATGATATCCTCCAAAGCCCCACTGACCCAAACGCCAGAGATCTCCCCCTGAGCCTATCTCAACTCAACATCAATCCAACCGGAGCTGACATGGAAGAAAGTCAGGAATCGTCCACAAACGCTCTGCCACAGTCAGGGCAGAAGAATCGGGGAAACTTTCAGGCCTAAACACTGAGTTGGGCCTGCACTCACCACCACAGTCTCCCAAAGTCACACAAACGATGTAgtttgttttgaaagaaaaactgTAGTCAACGGGAAATCATTAAACTATGTAGAATTCCACGCCCTTGGCTGGGTGAGACACCTGTTTTTAATATGGAGATTGGGCCAAACATCCCCGTATTTAACAATGGATTAGGGCTAAAGCCAGACTGAGGTTGGCAAATAGTGATTTAAGTAATATTTCAGGATCCATCTAACTTACTAGAGGATGCACGGAACTGCAAAGAGCATATAAAGATCGGTTATAATGGTGCTGGTTGACAGTGGGTTtccaggtagtagaaactacagGTGGACTACAGTTTGTGGTTGCTGTGGTGACTGAAAGGATTTGAGCATTTTGATCTCATACTTCCTTCAGAAACATCATCCAGACACCGccccattttttaaaattgtatatacagtatacgtCATTGATCACAGGTTTTTATTAAACAACACCACTACCTTGGA
>XR_002471343.1
GTTTATTGGTCAGAGCAGCAGAAAACCTGTCAATCAAGGAATGTAATGCAACGACTGGGGTTTTACATGTATAGTATTGATGCGCGTACAATAACCGTACATCGTATGTAAAGGCAATAGGCTATAAACCGATGTGAGTAGGCTATCTAAATCCAGATATTTACCTAGAGCGTAAATAATCCTGTGGGGTTTTGTAGTTGATCCGCGTCGCGTACGGTCAATTTGATTCCTTTGTAGGCCCACTAGACTAGATTCCCTTTGTCACTCGCTCAAAAATGTGGCACGGATTTTACAGTCGTAGGATGACAGATTACTCAAGGAGTGGCTATGTGAACATGTGTCAGCGATGACCGAAGTTGAAGTGACGTATGCAGACTTCATAGCCTCCGGTAGAACTGGACGAAGGAATGCCCTGCATGATATCCTCCAAAGCCCCACTGACCCAAACGCCAGAGATCTCCCCCTGAGCCTATCTCAACTCAACATCAATCCAACCGGAGCTGACATGGAAGAAAGTCAGGAATCGTCCACAAACGCTCTGCCACAGTCAGGGCAGAAGAATCGGGGAAACTTTCAGGCCTAAACACTGAGTTGGGCCTGCACTCACCACCACAGTCTCCCAAAGTCACACAAACGATGTAgtttgttttgaaagaaaaactgTAGTCAACGGGAAATCATTAAACTATGTAGAATTCCACGCCCTTGGCTGGGTGAGACACCTGTTTTTAATATGGAGATTGGGCCAAACATCCCCGTATTTAACAATGGATTAGGGCTAAAGCCAGACTGAGGTTGGCAAATAGTGATTTAAGTAATATTTCAGGATCCATCTAACTTACTAGAGGATGCACGGAACTGCAAAGAGCATATAAAGATCGGTTATAATGGTGCTGGTTGACAGTGGGTTtccaggtagtagaaactacagGTGGACTACAGTTTGTGGTTGCTGTGGTGACTGAAAGGATTTGAGCATTTTGATCTCATACTTCCTTCAGAAACATCATCCAGACACCGccccattttttaaaattgtatatacagtatacgtCATTGATCACAGGTTTTTATTAAACAACACCACTACCTTGGA
>XM_036965998.1
TCGACCACAAATGGGAGAAAACAAACATTCTTTCCCATATTGATCCCAAATGGAACgtcttcatatatatttttttaatcatacAGAAATAACTAAACATGTCgaaaagctgctgtgttgttcaatgtacatgtaGCCAGATCAGAAATCCGTCCTACGGTTCTCAAACCTCCCACGGGCCTGGGAGAaaagccctgtggcttcaggctattcggTGTGGGAAATGTGGGGATGCAgtgtccaagtaggctacacGTAGCTACGTGTGTGGGAAACATGTCATCACAGGAGTGGCTATGTGAACATGTGTCAGCGATGACCGAAGTTGAAGTGACGTATGCAGACTTCATAGCCTCCGGTAGAACTGGACGAAGGAATGCCCTGCATGATATCCTCCAAAGCCCCACTGACCCAAACGCCAGAGATCTCCCCCTGAGCCTATCTCAACTCAACATCAATCCAACCGGAGCTGACATGGAAGAAAGTCAGGAATCGTCCACAAACGCTCTGCCACAGTCAGGGCAGAAGAATCGGGGAAACTTTCAGGCCTAAACACTGAGTTGGGCCTGCACTCACCACCACAGTCTCCCAAAGTCACACAAACGATGTAgtttgttttgaaagaaaaactgTAGTCAACGGGAAATCATTAAACTATGTAGAATTCCACGCCCTTGGCTGGGTGAGACACCTGTTTTTAATATGGAGATTGGGCCAAACATCCCCGTATTTAACAATGGATTAGGGCTAAAGCCAGACTGAGGTTGGCAAATAGTGATTTAAGTAATATTTCAGGATCCATCTAACTTACTAGAGGATGCACGGAACTGCAAAGAGCATATAAAGATCGGTTATAATGGTGCTGGTTGACAGTGGGTTtccaggtagtagaaactacagGTGGACTACAGTTTGTGGTTGCTGTGGTGACTGAAAGGATTTGAGCATTTTGATCTCATACTTCCTTCAGAAACATCATCCAGACACCGccccattttttaaaattgtatatacagtatacgtCATTGATCACAGGTTTTTATTAAACAACACCACTACCTTGGA

Function

NR:

description
PREDICTED: cAMP-dependent protein kinase inhibitor alpha

GO: NA

KEGG:

id description
K15985 PKIA; cAMP-dependent protein kinase inhibitor alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002471344.1 False 1104 mRNA 0.44 3 19209199 19211641
XR_002471343.1 False 1096 mRNA 0.44 3 19209199 19211657
XM_036965998.1 True 1065 mRNA 0.44 3 19209199 19255933

Neighbor

gene id symbol gene type direction distance location
sc61g NA coding downstream 12155 19193808 ~ 19197058 (-)
LOC110508678 LOC105024244 coding downstream 23873 19116082 ~ 19185326 (-)
LOC110508677 LOC106599302 coding downstream 114134 19081538 ~ 19095065 (-)
LOC110508178 LOC106569286 coding downstream 138321 19069035 ~ 19070878 (-)
LOC110508177 LOC106599299 coding downstream 141585 19029299 ~ 19067614 (-)
LOC110508682 LOC106599592 coding upstream 77134 19333067 ~ 19341851 (-)
LOC110508683 LOC106599309 coding upstream 91373 19347306 ~ 19359854 (-)
atpsckmt LOC106599314 coding upstream 103584 19359517 ~ 19361133 (-)
LOC110508684 LOC106599312 coding upstream 105127 19361060 ~ 19367850 (-)
socs6 socs6 coding upstream 135431 19391364 ~ 19394722 (-)
G2113873 NA non-coding downstream 3799 19205189 ~ 19205400 (-)
G2113872 NA non-coding downstream 4091 19204844 ~ 19205108 (-)
G2113871 NA non-coding downstream 4943 19204057 ~ 19204256 (-)
G2113823 NA non-coding downstream 103589 19105287 ~ 19105610 (-)
G2113953 LOC106599307 non-coding upstream 65708 19321641 ~ 19324735 (-)
G2113954 NA non-coding upstream 70139 19326072 ~ 19326720 (-)
G2113978 NA non-coding upstream 140780 19396713 ~ 19397180 (-)
G2113982 NA non-coding upstream 147515 19403448 ~ 19403721 (-)
G2113988 NA non-coding upstream 151188 19407121 ~ 19407379 (-)
G2113520 LOC106599295 other downstream 199534 19007232 ~ 19011635 (-)
LOC118944847 NA other downstream 242720 18958044 ~ 18966479 (-)
G2113320 LOC100194703 other downstream 423877 18784897 ~ 18785322 (-)
G2113287 NA other downstream 466915 18741918 ~ 18742284 (-)
G2115838 NA other upstream 1603207 20859140 ~ 20859530 (-)
G2117313 NA other upstream 2614752 21870685 ~ 21871053 (-)
mrps14 mrps14 other upstream 2617283 21873216 ~ 21876709 (-)
LOC110508740 kiaa0040 other upstream 2687048 21942981 ~ 21948557 (-)
G2118200 brinp2 other upstream 3338600 22594533 ~ 22607806 (-)

Expression


Co-expression Network