Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110508689 |
| gene name | LOC106599321 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 19439625 ~ 19458620 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021589407.2 | False | 3296 | mRNA | 0.49 | 6 | 19439625 | 19454667 |
| XR_005040225.1 | False | 3392 | mRNA | 0.49 | 6 | 19439625 | 19454669 |
| XM_021589408.2 | True | 3376 | mRNA | 0.47 | 6 | 19439625 | 19458620 |
19,428,000
19,432,000
19,436,000
19,440,000
19,444,000
19,448,000
19,452,000
19,456,000
19,460,000
19,464,000
NC_048592.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508686 | LOC106599593 | coding | upstream | 65057 | 19372009 ~ 19374568 (+) |
| LOC110508681 | LOC106599307 | coding | upstream | 117523 | 19217481 ~ 19322102 (+) |
| LOC110508679 | LOC106599305 | coding | upstream | 230555 | 19205372 ~ 19209070 (+) |
| LOC110508675 | LOC106599295 | coding | upstream | 427984 | 18986697 ~ 19011641 (+) |
| LOC110508672 | NA | coding | upstream | 574211 | 18849186 ~ 18865414 (+) |
| LOC110508179 | LOC106599327 | coding | downstream | 72423 | 19531043 ~ 19542347 (+) |
| LOC110508279 | LOC106599328 | coding | downstream | 127473 | 19586093 ~ 19589514 (+) |
| LOC110508695 | LOC106599333 | coding | downstream | 165212 | 19623468 ~ 19636825 (+) |
| LOC110508697 | LOC106599330 | coding | downstream | 198405 | 19657025 ~ 19667196 (+) |
| LOC110508700 | LOC106599341 | coding | downstream | 466261 | 19924881 ~ 19933094 (+) |
| G2113990 | NA | non-coding | upstream | 30820 | 19408527 ~ 19408805 (+) |
| G2113979 | NA | non-coding | upstream | 39383 | 19400026 ~ 19400242 (+) |
| G2113766 | socs6 | non-coding | upstream | 45102 | 19391382 ~ 19394523 (+) |
| G2113762 | NA | non-coding | upstream | 55317 | 19384066 ~ 19384308 (+) |
| G2113761 | NA | non-coding | upstream | 55893 | 19383500 ~ 19383732 (+) |
| G2114016 | NA | non-coding | downstream | 9957 | 19468577 ~ 19468844 (+) |
| G2114039 | NA | non-coding | downstream | 13950 | 19472570 ~ 19473353 (+) |
| G2114074 | NA | non-coding | downstream | 72173 | 19530793 ~ 19531013 (+) |
| G2114079 | NA | non-coding | downstream | 79266 | 19537886 ~ 19538323 (+) |
| G2114076 | NA | non-coding | downstream | 85311 | 19543931 ~ 19546126 (+) |
| G2113578 | NA | other | upstream | 363207 | 19076077 ~ 19076418 (+) |
| G2113059 | NA | other | upstream | 771129 | 18667115 ~ 18668496 (+) |
| G2112127 | NA | other | upstream | 1535701 | 17903198 ~ 17903924 (+) |
| G2111491 | NA | other | upstream | 1684044 | 17754937 ~ 17755581 (+) |
| G2111457 | NA | other | upstream | 1730996 | 17708256 ~ 17708629 (+) |
| G2115369 | NA | other | downstream | 983113 | 20441733 ~ 20442169 (+) |
| LOC110508722 | LOC106569260 | other | downstream | 1381950 | 20840508 ~ 20842019 (+) |
| G2116347 | NA | other | downstream | 1915875 | 21374495 ~ 21375078 (+) |
| smg7 | smg7 | other | downstream | 3621796 | 23056778 ~ 23087821 (+) |
