LOC110508693 (dnjb6)


Basic Information

Item Value
gene id LOC110508693
gene name dnjb6
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 19541912 ~ 19558555 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589413.2
CACAAAACACCAAAGAAGAAGAGCAGTCGTTAACCGGATGTTACGTCAAATCCACAAACAACCCAAGGCTGCTGAAATTTCTCTGGAGCAAAGCAGCATTTTCTGGAATAACCCTAAGTGGAAAACGATTATAAATCAGCACTGGGAATTTATCCGTCTATAAAAGAAAACTGGGACGCTGAAGAGCAAGGTTGCAAAAAGTTCTACAAAACCATGGTGGAATATTATCACATTTTAGGTGTCCAAAGAAATGCATCTCAGGAAGACATTAAAAAAGCGTACAGAAAATTGGCACTAAAATGGCATCCAGATAAAAACCCAGAAAATAAGGAAGAGGCAGAGAAAAAGTTCAAGGAACTTTCTGAGGCCTATGAAGTTCTATCAGATGCCAACAAGAGGAACATGTATGATCGCTATGGTAAAGAAGGTCTAACAACAAACAACGGCGGAGGTGGTGGACATTACCACAATGGTGATCACTTCAACGAAGGGTTCACGTTCCGCAATCCAGAAGACGTCTTCAGGGAGTTCTTTGGGGGTCGAGATCCTTTTGCTGATTTCTTTGGAGGGGATCCGTTTGGGGATGAGTTTTTTGGTGGAGGGCGGAGGCACCACAGGGGGGTGAGCAGGAGTCGGACAGGGGGTCCCTTCTTCGGGGGATTCGGAGGCTTCCCACCCTTTGGTGCAGGTTTTACAGCATTTGAACCAGGCTTTACCTCTTTTGGACACATGGGTCAGATGGGTCACATGGGTCAGATGGGTCACATGGGTCAGATGGGCCACATGGGCCACATGGGTCATCTGGGAGGAGGCGGCGGCCACGGCGGCTTCACTGCCTTCTCCACCTCCTTTGGCggtgggggtggaggtgggggtggaggtggtGGGATGGGCAACTTCCGCTCTGTGTCAACCTCCACCAAATTCATCAACGGCAGGAAAATCACAACAAAAAGAATTGTGGAGAATGGACAGGAACGAGTAGAGGTGGAAGAAGACGGACAGTTAAGATCACTAACCATCAATGGGACAAAGCCTAATGCCGCAGTCCAACAGGAGGAGTGCAGACAAACTGTTACTGCACACTCCTCTAGTGCACACGCCTCCCGGTCCCCTGTTTCCCGTCCTCCTCATCATGTAAAGACTTCCTCCCACAGTCCCAatccagacagagaggagggaaggagcccTGCTTCAGGACACAGTGAAAACAAGAGGAAGAAACCCATGCCCGAGCCCACAGAGGATGCCAAAAAGAGAAAAACATAATGGATTCAGTATACACATCAGATCCTTGTCCTTCTAGTCAGCTACGTAAACAACATGTCATTAATACACCCTTAACAAGTAATATTGTTGAAAGGACACTTAAATATGGGGTGCTAAAAGCTCTTTATCAAGCATGTACACATACTATAAATGTATAATCCTGACTACTTTTCTAGTATATATCCTATCTTATGACCATTCGAAAATACCAAGAGCAAACATCCCCATGTGGTTATATTTGACCAAATGATTCAGAAAACCATGCAAATTACAATTGAAATTATTTTAAATCGTGACACTTGTGTTTCCTTACATACTGTAATGTGCATTAGTAAAGGAACACTATGTCAATTAGTTTAACTGCAATATTGGATGGGTGATGTGCAGGGGTGAAAATATGATAAGTTTTAAGGGTGGTGGtagttgcggggggggggggtggttatgTGTATTAATAATAGTCCAAATCAAGGAGGATGCACCAAGTCTTCTTTTGTTAACAATGGTGATACCATACCCCGACATTCCTTCTTAATCCAACCCATGTTTTTGTGTACAGTGCATTTAGTAGGAAACAGCCCATGATAATATATGTTGCTGTTACTTCCTGGCTGCCAGTGCCCTCAGCAGAGGGTTCCATTTGCTCTGACAGGGGAGGGGCTTGTCCCTGTAGCCCTGGAACAGCTGAGGACCGTCGTGCTCTTCTGCCTCTGAACTGATCTCCATCTTCTGAACGATCAGCTTCAGAAGGTTGTGCTGCTTCTCAATAATATTAGACATTTCCTTTAACCTGGAGAATGAATAGATGATCTATTTGAATAGTCTCAAAAGGAGTGTAGAATGGAAGCACTTAATAAGACATTTGCAGAATGCACTAAATACTCATACATCTTTTAATACTGATAAACTAAATGCAGATAAACATTTGAATGTTAATACTTGTAGTGTATTGCTCTGCTGTTGTATTTAAATAAGGTCAAACAAACAACTGGTGTGAACTAAGTA
>XM_021589414.2
CAAAACACCAAAGAAGAAGAGCAGTCGTTAACCGGATGTTACGTCAAATCCACAAACAACCCAAGGCTGCTGAAATTTCTCTGGAGCAAAGCAGCATTTTCTGGAATAACCCTAAGTGGAAAACGATTATAAATCAGCACTGGGAATTTATCCGTCTATAAAAGAAAACTGGGACGCTGAAGAGCAAGGTTGCAAAAAGTTCTACAAAACCATGGTGGAATATTATCACATTTTAGGTGTCCAAAGAAATGCATCTCAGGAAGACATTAAAAAAGCGTACAGAAAATTGGCACTAAAATGGCATCCAGATAAAAACCCAGAAAATAAGGAAGAGGCAGAGAAAAAGTTCAAGGAACTTTCTGAGGCCTATGAAGTTCTATCAGATGCCAACAAGAGGAACATGTATGATCGCTATGGTAAAGAAGGTCTAACAACAAACAACGGCGGAGGTGGTGGACATTACCACAATGGTGATCACTTCAACGAAGGGTTCACGTTCCGCAATCCAGAAGACGTCTTCAGGGAGTTCTTTGGGGGTCGAGATCCTTTTGCTGATTTCTTTGGAGGGGATCCGTTTGGGGATGAGTTTTTTGGTGGAGGGCGGAGGCACCACAGGGGGGTGAGCAGGAGTCGGACAGGGGGTCCCTTCTTCGGGGGATTCGGAGGCTTCCCACCCTTTGGTGCAGGTTTTACAGCATTTGAACCAGGCTTTACCTCTTTTGGACACATGGGTCAGATGGGTCACATGGGTCAGATGGGTCACATGGGTCAGATGGGCCACATGGGCCACATGGGTCATCTGGGAGGAGGCGGCGGCCACGGCGGCTTCACTGCCTTCTCCACCTCCTTTGGCggtgggggtggaggtgggggtggaggtggtGGGATGGGCAACTTCCGCTCTGTGTCAACCTCCACCAAATTCATCAACGGCAGGAAAATCACAACAAAAAGAATTGTGGAGAATGGACAGGAACGAGTAGAGGTGGAAGAAGACGGACAGTTAAGATCACTAACCATCAATGGTAAGGAACAACTACTGCGACTGGATAACAAGTAATCTCCTGGAACATTACCAGCACAAACTTGAGCTTAAAAAAACAATGTTATACCATTGTTTGGATGTATGTACTTTTGGTTTTTCCCTTGTTAGCATTTGTAGGTCAAGGTGTCCATTAGGAAAATAAAATGTTCTATGCATTTTGTTAATGTATTTATGAATTGGAGCTGTCAACAATTTGGCTTAGGATGGTGTGTTTTTACTTGCGTTTGGGTAAGTTAGGACCAGACAACTTTTGTTTGTACTGTCTTTCTGTATGCACTTCGCTCTATTGCAGTCTCCATGGGCTTATTGCCTTTGATAGTGTTTTGGACAAGGAACGCATTGTGCATTTAGATAAAGCATGACTTGGCTTTTTCGTCTGGACATTAATATGAGTGTTGAACTGGAAAACTTAACCCTTGCTTTAAAACCCTGTTTACGACCTAATTGCTTGTCTAACCTTTGTTagtaaaaccttttttgtaaaaTGCGTGTAGAAAGTGTTAATATGCTATTTTATTTGTTCTAATACGagtgtattttgtgtttttttttgttcatttCAGCATGTATGCCAATAAATGTTCCTCAATCTTAATGTTATTATTGCATAACCATGCACAAATTAATGATtcattatataaattatatatgAATATACAACAAATTTTGTGTACTTTGTAAAACAATTTAAAATCAATAAATATGAATTTCATCCTTTTTGGGGATGGGACGAACAGTCTTG

Function

NR:

description
dnaJ homolog subfamily B member 6-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589413.2 False 2274 mRNA 0.44 10 19541912 19558555
XM_021589414.2 True 1787 mRNA 0.42 8 19544833 19558553

Neighbor

gene id symbol gene type direction distance location
LOC110508692 LOC106599326 coding downstream 24622 19490721 ~ 19517290 (-)
LOC110508691 LOC106599325 coding downstream 53364 19484950 ~ 19488548 (-)
tmem70 LOC106599322 coding downstream 69495 19469835 ~ 19472417 (-)
crispld1b LOC106599318 coding downstream 115569 19415704 ~ 19426343 (-)
socs6 socs6 coding downstream 147190 19391364 ~ 19394722 (-)
LOC110508694 LOC106599332 coding upstream 84418 19642973 ~ 19648077 (-)
LOC110508698 LOC106599334 coding upstream 113776 19672331 ~ 19724429 (-)
LOC118944854 NA coding upstream 197610 19756165 ~ 19787841 (-)
LOC110508281 LOC106599594 coding upstream 229891 19788446 ~ 19789753 (-)
LOC110508699 LOC106599337 coding upstream 243434 19801989 ~ 19919902 (-)
G2114788 NA non-coding downstream 1331 19539751 ~ 19540581 (-)
G2114796 NA non-coding downstream 4276 19536964 ~ 19537636 (-)
G2114795 NA non-coding downstream 4991 19536460 ~ 19536921 (-)
G2114741 NA non-coding downstream 51470 19489813 ~ 19490442 (-)
G2114757 NA non-coding downstream 65881 19475831 ~ 19476031 (-)
G2114785 LOC106599333 non-coding upstream 71550 19630105 ~ 19637488 (-)
G2114789 NA non-coding upstream 82936 19641491 ~ 19641944 (-)
G2114851 LOC106569237 non-coding upstream 98546 19657101 ~ 19658710 (-)
G2114910 NA non-coding upstream 186876 19745431 ~ 19745687 (-)
G2114918 NA non-coding upstream 199236 19757791 ~ 19758133 (-)
LOC110508678 LOC105024244 other downstream 419856 19116082 ~ 19185326 (-)
G2113520 LOC106599295 other downstream 532247 19007232 ~ 19011635 (-)
LOC118944847 NA other downstream 575433 18958044 ~ 18966479 (-)
G2113320 LOC100194703 other downstream 756590 18784897 ~ 18785322 (-)
G2113287 NA other downstream 799628 18741918 ~ 18742284 (-)
G2115838 NA other upstream 1300585 20859140 ~ 20859530 (-)
G2117313 NA other upstream 2312130 21870685 ~ 21871053 (-)
mrps14 mrps14 other upstream 2314661 21873216 ~ 21876709 (-)
LOC110508740 kiaa0040 other upstream 2384426 21942981 ~ 21948557 (-)
G2118200 brinp2 other upstream 3035978 22594533 ~ 22607806 (-)

Expression


Co-expression Network