Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110508718 |
| gene name | LOC106599369 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 20808650 ~ 20813055 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| target of EGR1 protein 1-like |
| id | name | namespace |
|---|---|---|
| GO:0005634 | nucleus | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0003676 | nucleic acid binding | molecular_function |
| id | description |
|---|---|
| K13202 | TOE1; target of EGR1 protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021589463.2 | True | 2071 | mRNA | 0.47 | 7 | 20808650 | 20813055 |
20,804,000
20,805,000
20,806,000
20,807,000
20,808,000
20,809,000
20,810,000
20,811,000
20,812,000
20,813,000
20,814,000
20,815,000
20,816,000
20,817,000
NC_048592.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508716 | dcup | coding | upstream | 126765 | 20674599 ~ 20681885 (+) |
| LOC110508715 | lyn | coding | upstream | 139677 | 20654663 ~ 20668973 (+) |
| tgs1 | tgs1 | coding | upstream | 156916 | 20637091 ~ 20651734 (+) |
| LOC110508711 | NA | coding | upstream | 182774 | 20621175 ~ 20625876 (+) |
| LOC110508710 | xkr4 | coding | upstream | 187553 | 20533785 ~ 20621097 (+) |
| LOC110508722 | LOC106569260 | coding | downstream | 27453 | 20840508 ~ 20842019 (+) |
| LOC110508723 | LOC106599374 | coding | downstream | 148109 | 20961164 ~ 21152939 (+) |
| LOC110508725 | klf4 | coding | downstream | 424109 | 21204573 ~ 21239672 (+) |
| LOC110508726 | LOC106599379 | coding | downstream | 448068 | 21261123 ~ 21348624 (+) |
| LOC110508728 | LOC106599384 | coding | downstream | 555073 | 21368128 ~ 21373297 (+) |
| G2115703 | NA | non-coding | upstream | 12994 | 20749113 ~ 20795656 (+) |
| G2115730 | NA | non-coding | upstream | 15303 | 20786638 ~ 20793347 (+) |
| G2115529 | NA | non-coding | upstream | 109275 | 20697183 ~ 20699375 (+) |
| G2115513 | NA | non-coding | upstream | 143636 | 20664232 ~ 20665014 (+) |
| G2115748 | NA | non-coding | downstream | 8522 | 20821577 ~ 20822238 (+) |
| G2115857 | NA | non-coding | downstream | 65300 | 20878355 ~ 20878591 (+) |
| G2115875 | NA | non-coding | downstream | 86562 | 20899617 ~ 20899817 (+) |
| G2115881 | NA | non-coding | downstream | 92891 | 20905946 ~ 20906145 (+) |
| G2115993 | NA | non-coding | downstream | 258207 | 21071262 ~ 21071924 (+) |
| G2115369 | NA | other | upstream | 366481 | 20441733 ~ 20442169 (+) |
| LOC110508695 | LOC106599333 | other | upstream | 1171897 | 19623468 ~ 19636825 (+) |
| G2113578 | NA | other | upstream | 1732232 | 19076077 ~ 19076418 (+) |
| G2113059 | NA | other | upstream | 2140154 | 18667115 ~ 18668496 (+) |
| G2112127 | NA | other | upstream | 2904726 | 17903198 ~ 17903924 (+) |
| G2116347 | NA | other | downstream | 561440 | 21374495 ~ 21375078 (+) |
| smg7 | smg7 | other | downstream | 2267361 | 23056778 ~ 23087821 (+) |
| LOC110508761 | LOC106599440 | other | downstream | 2289354 | 23102409 ~ 23103987 (+) |
| G2118574 | NA | other | downstream | 2350811 | 23163866 ~ 23164323 (+) |
