Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110508728 |
| gene name | LOC106599384 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 21368128 ~ 21373297 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| von Willebrand factor C domain-containing protein 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021589481.2 | True | 2545 | mRNA | 0.43 | 3 | 21368128 | 21373297 |
21,364,000
21,365,000
21,366,000
21,367,000
21,368,000
21,369,000
21,370,000
21,371,000
21,372,000
21,373,000
21,374,000
21,375,000
21,376,000
21,377,000
21,378,000
NC_048592.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508726 | LOC106599379 | coding | upstream | 19504 | 21261123 ~ 21348624 (+) |
| LOC110508725 | klf4 | coding | upstream | 128456 | 21204573 ~ 21239672 (+) |
| LOC110508723 | LOC106599374 | coding | upstream | 215189 | 20961164 ~ 21152939 (+) |
| LOC110508722 | LOC106569260 | coding | upstream | 526109 | 20840508 ~ 20842019 (+) |
| LOC110508718 | LOC106599369 | coding | upstream | 555073 | 20808650 ~ 20813055 (+) |
| LOC110508183 | LOC106599611 | coding | downstream | 198613 | 21571910 ~ 21579065 (+) |
| LOC110508733 | NA | coding | downstream | 257323 | 21630620 ~ 21648803 (+) |
| tnn | tnn | coding | downstream | 518178 | 21891475 ~ 21930071 (+) |
| pappa2 | pappa2 | coding | downstream | 848097 | 22221394 ~ 22280894 (+) |
| LOC118944814 | NA | coding | downstream | 1004812 | 22378109 ~ 22383367 (+) |
| G2116335 | NA | non-coding | upstream | 6734 | 21361154 ~ 21361394 (+) |
| G2116331 | NA | non-coding | upstream | 11125 | 21356677 ~ 21357003 (+) |
| G2116314 | NA | non-coding | upstream | 45154 | 21322621 ~ 21322974 (+) |
| G2116214 | NA | non-coding | upstream | 188514 | 21179383 ~ 21179614 (+) |
| G2116348 | NA | non-coding | downstream | 2783 | 21376080 ~ 21376359 (+) |
| G2116452 | vato | non-coding | downstream | 149574 | 21522871 ~ 21525723 (+) |
| G2116503 | NA | non-coding | downstream | 230619 | 21603916 ~ 21604363 (+) |
| G2116532 | NA | non-coding | downstream | 296526 | 21669823 ~ 21670154 (+) |
| G2116534 | NA | non-coding | downstream | 298651 | 21671948 ~ 21672675 (+) |
| G2115369 | NA | other | upstream | 925959 | 20441733 ~ 20442169 (+) |
| LOC110508695 | LOC106599333 | other | upstream | 1731375 | 19623468 ~ 19636825 (+) |
| G2113578 | NA | other | upstream | 2291710 | 19076077 ~ 19076418 (+) |
| G2113059 | NA | other | upstream | 2699632 | 18667115 ~ 18668496 (+) |
| G2116347 | NA | other | downstream | 1198 | 21374495 ~ 21375078 (+) |
| smg7 | smg7 | other | downstream | 1707119 | 23056778 ~ 23087821 (+) |
| LOC110508761 | LOC106599440 | other | downstream | 1729112 | 23102409 ~ 23103987 (+) |
| G2118574 | NA | other | downstream | 1790569 | 23163866 ~ 23164323 (+) |
| LOC110508774 | LOC106599485 | other | downstream | 2727860 | 24101070 ~ 24137027 (+) |
