mrps14 (mrps14)


Basic Information

Item Value
gene id mrps14
gene name mrps14
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 21873216 ~ 21876709 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589498.2
GCCAACTCCCGCCTTGTCGCAAGGTGGTAGTATTCTGCACATCAACATTTTGAGCATCACAGAAGAAGACGCAATTGTCAAGATGGCGGCGGCCTGTAGGACTGCACTTGCGGGGTTAAATGTTTTTCACTCCTCCTTTTGTACACCTAAACAGACTCTGAGAAGCTGCTGGAGTGTGGTGGAGCAAGTCAGAGGGTACTATGTTGACTGGAGAATGCTACGCGACGTGAAGAGAAGGCAGATGGCCTTTGACTATGCAGATGAAAGACTACGGATCAATGCACTAAGGAAGAACACTGTTCTCCCCAAGGAGCTTCAGGATGTTGCCGATAAAGAAATCGCCGCGCTACCACGTGACAGCTGTCCAGTACGAATCCGGAATAGATGTGTGATGACCTCACGGCCGCGGGGCGTCAAGCGCAGGTGGCGTCTCAGTCGCATAGTCTTCCGTCACCTGGCGGACCACAACCAGATGTCTGGAATACAGCGGGCCATGTGGTGATTTTATTTATCTcaatgatgtagtggtaaaaaataATGATAATAGGTGGTCATCGTTTGCAGTGAGTAAAGTAATGGTCCCTAAACCTGCAGAAGACGGGTAAACACTCGTGCAAAATATAAAAGCATTTACGTGCATTTATCCTCTACTACACTACTGGTGATTAGGGTTAGTCATTGTCGGGCGACCGGACCAACACAGTACACTATGCTGTGAACTCTGTTTTTCTTTTCCACACCACTTTGAATTATGTTAATTGAAGGTTGCAACTGACAGCTTAAAGGTGTCAACTGTATTAAAACAAATAAAAGGATGTATGTTTGAATC
>TU2421081
CAGAAGAAGACGCAATTGTCAAGATGGCGGCGGCCTGTAGGACTGCACTTGCGGGGTTAAATGTTTTTCACTCCTCCTTTTGTACACCTAAACAGACTCTGAGAAGCTGCTGGAGTGTGGTGGAGCAAGTCAGAGGGTACTATGTTGACTGGAGAATGCTACGCGACGTGAAGAGAAGGCAGATGGCCTTTGACTATGCAGATGAAAGACTACGGATCAATGCACTAAGGAAGAACACTGTTCTCCCCAAGGAGCTTCAGGATGTTGCCGATAAAGAAATCGCCGCGCTACCACGTGACAGCTGTCCAGTACGAATCCGGAATAGATGTGTGATGACCTCACGGCCGCGGGGCGTCAAGCGCAGGTGGCGTCTCAGTCGCATAGTCTTCCGTCACCTGGCGGACCACAACCAGATGTCTGGAATACAGCGGGCCATGTGGTGATTTTATTTATCTcaatgatgtagtggtaaaaaataATGATAATAGGTGGTCATCGTTTGCAGTGAGTAAAGTAATGGTCCCTAAACCTGCAGAAGACGGGTAAACACTCGTGCAAAATATAAAAGCATTTACGTGCATTTATCCTCTACTACACTACTGGTGATTAGGGTTAGTCATTGTCGGGCGACCGGACCAACACAGTACACTATGCTGTGAACTCTGTTTTTCTTTTCCACACCACTTTGAATTATGTTAATTGAAGGTTGCAACTGACAGCTTAAAGGTGTCAACTGTATTAAAACAAATAAAAGGATGTATGTTTGAATC

Function

symbol description
mrps14 Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Predicted to be part of mitochondrial small ribosomal subunit. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 38. Orthologous to human MRPS14 (mitochondrial ribosomal protein S14).

NR:

description
28S ribosomal protein S14, mitochondrial

GO:

id name namespace
GO:0006412 translation biological_process
GO:0005840 ribosome cellular_component
GO:0003735 structural constituent of ribosome molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589498.2 False 829 mRNA 0.46 3 21873216 21876709
TU2421081 True 770 TUCP 0.46 3 21873216 21876650

Neighbor

gene id symbol gene type direction distance location
LOC110508737 cacybp coding downstream 6181 21864614 ~ 21867035 (-)
plk3 LOC106599391 coding downstream 10785 21852912 ~ 21862431 (-)
eif2b3 ei2bg coding downstream 87313 21707382 ~ 21785903 (-)
LOC110508734 LOC106599390 coding downstream 172257 21665408 ~ 21700959 (-)
LOC110508732 NA coding downstream 325255 21545240 ~ 21547961 (-)
LOC110508740 kiaa0040 coding upstream 68100 21942981 ~ 21948557 (-)
tnr tnr coding upstream 89586 21966295 ~ 22125301 (-)
cop1 rfwd2 coding upstream 325739 22202448 ~ 22212426 (-)
astn1 astn1 coding upstream 409957 22286666 ~ 22527081 (-)
dars2 dars2 coding upstream 918930 22795639 ~ 22816743 (-)
G2117316 NA non-coding downstream 234 21872618 ~ 21872982 (-)
G2117314 NA non-coding downstream 1379 21871475 ~ 21871837 (-)
G2117311 NA non-coding downstream 3881 21868804 ~ 21869335 (-)
G2117017 NA non-coding downstream 78455 21794518 ~ 21794761 (-)
G2117015 NA non-coding downstream 79986 21792970 ~ 21793230 (-)
G2117349 NA non-coding upstream 41424 21918133 ~ 21922635 (-)
G2117357 NA non-coding upstream 50850 21927559 ~ 21929837 (-)
G2117359 NA non-coding upstream 57023 21933732 ~ 21933943 (-)
G2117364 NA non-coding upstream 60771 21937480 ~ 21937682 (-)
G2117406 NA non-coding upstream 148366 22025075 ~ 22025416 (-)
G2117313 NA other downstream 2163 21870685 ~ 21871053 (-)
G2115838 NA other downstream 1013686 20859140 ~ 20859530 (-)
LOC110508678 LOC105024244 other downstream 2751160 19116082 ~ 19185326 (-)
G2113520 LOC106599295 other downstream 2863551 19007232 ~ 19011635 (-)
LOC118944847 NA other downstream 2906737 18958044 ~ 18966479 (-)
G2118200 brinp2 other upstream 717824 22594533 ~ 22607806 (-)
LOC110508185 LOC106569033 other upstream 1448292 23317575 ~ 23353162 (-)
LOC110508783 LOC106599501 other upstream 2788165 24664869 ~ 24677152 (-)
G2120836 NA other upstream 2853965 24730674 ~ 24734987 (-)

Expression


Co-expression Network