dars2 (dars2)


Basic Information

Item Value
gene id dars2
gene name dars2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 22795639 ~ 22816743 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589527.2
AATCACTAATCTGTAAAAATAACGGATGGACACACTATAAACAACTAACTGTCGATAACAAGCACATCCATATTTATTCAGACTTGTGCTTTCTACTTCCGCCTGAACGTGGACGAGACAAGGAAGGAATTAGAGGACGCTTGTACCACAATCACATTGAAGGAACCAGGGAGATTTAGCTACCTAGCGCCGTTGTTTGGACAAAATTGACATGATGCAgctacattttttacatcaagtTTGCCAGTCGCTTTGATCGGGCGTAAATCGTATGAGTTTTatgtagctatctagctagcagtCATATGCAACAAGCAGCCAGTGTACAAGACATATCTTTACAATATTAGATAATAGCTGTTTAGTTAGCTACAGTACTGTTAGCTAGCAAGTTATCTGAAATGGCCAATAAAAGCAGAGCATTGGCGCAGAGGATGCTTCTCATCTGTAGACAGGAGACCAGGGCATATTCACTATGGCGAAGGACAACAATTCCGATTGCACATCTGATCAAACCCAGCATTATGCATTTGAAGTTTTCTCTCAATGTCAACAGACACTCAACGTGCACAACAGGTCCTAGCAGCTTGTCCTTTCGGAGTCACACTTGTGGGGAGCTACGGCCTGCTGATGTTGGAGAGGAAGTCACTCTGTGTGGCTGGGTTCAATACCTGAGACAGGATTTATTTGTTATCATGAGAGATTTCAGTGGCTTGGCACAAATTCTTATCCCTCAAGACGAGGACAAAATGAATCTGAAAACAGCCTTGTGTGACTTACCACCTGAATCAGTGATCAGGGTGAAAGGCACGGTCAGGCTTCGACCAGATGGACAAGAGAACAAGGAGATGCCCACCGGAGAGATCGAGGTTCTTGCAGAGAGTGTGGAGATTCTAAATGTCTGCCGTAAGCTTCCCTTTGAAATCAAAGATTTTGTGAAAAAATCTGAATCCCTTCGGATGCAGTATCGCTATCTGGACCTTCGTTCGTCACAAATGCAGTATAACCTGAGGCTGAGGTCCCAGCTAGTGATGAAGATGAGAGAGTACCTGTGCAATGTGCATGGGTTTGTGGATGTTGAAACTCCCACCTTATTTAAGAGGACTCCAGGGGGTGCAAAGGAGTTTGTGGTGCCCTCAAGAGAACCTGGTCGATTTTACTCCCTGCCTCAGAGTCCTCAGCAGTTTAAACAGCTTCTCATGGTGGCTGGCATTGACAGGTACTTTCAACTTGCCCGGTGCTACAGAGATGAGGGTTCCAAACCAGACAGACAACCAGAATTTACTCAGGTGGACATTGAGATGTCCTTTGTGGATCAAGCTGGAATCCGAGGTCTGATTGAGGGCTTGGTCCAGTACTCCTGGCCTGTGGAGAAAGATCCTGTCTCCACACCATTCCCCTGCATAACGTATGAAAAAGCAATGAAGGACTATGGAGTGGACAAGCCAGACACACGATTCGCCATGAAGCTCATGGACATCAGTGAAACATTCCACAACACAGAAATAGAGTTCCTTAAAGACGCCCTCAACCAACCAGGAGGATGTATCCAGGCAATCTGTATCCCAGATGGAGCAAAACATTTGAAGGGCAAAGATCACGAATCCCTGAAGCAAACTGCCAGGACCCAGTTCGGCCAGGAAGTGAGTGTAGTTTTGGTGAAGGCAGATGGTGCATTGAAGTCTCCCCTCAACAGACTCATGCCTGCCTCAGCTAAACAGCAGCTGCTCCAGATGGCCCAGGCCAGACCTGGGGACCTGCTGCTCATCTCTGCTGGGACGCAGGAATGTGTGCGCCCTTTGTTGGGCAAATTGAGGCTTCAATGTGCTGAACTCCTAGAGGACTCCGGTGTGGCTGTTCGAGACCCCTCAGCGTTTCACTTTCTGTGGGTGGTAGACTTCCCACTGTTCCTGCCAAAAGAAGAGGACCCTGATCAGCTTGAGTCAGCCCACCATCCTTTCACTGCACCTCTCCCTGAGGATGCTCATCTCCTGTATTCACTGCCTCACAAGGTACGTGGCCAGCATTACGACCTGGTCCTGAATGGGTGTGAGATTGGAGGAGGATCCATTCGTATTCACAAGGCCTCTGATCAACAGCATGTGCTGGAGACGATCCTCAAGGAGgatccatctctcctttctcacCTGTTAGAGGCACTGGACTCTGGGGCTCCCCCTCATGGTGGTATTGCATTGGGTTTGGACCGATTTCTGTCTATTATTGTCGGAGCCCCCAGCATCAGGGACGTGATTGCCTTCCCCAAATCATTCAGGGGCCATGACCTGATGAGTCATGCTCCAGACTTCGTCTCTGAAGACGAGCTTAAATCCTACCACATCGCTGTCAACTGGCCAGCAGGAGACGAAGGGAACCAGGAGAAATAGACATGGCTGCTGCTACACCTTTGTCCTGAAGCTGAGACTCTGACTCATATTACAGCTGGATTTACATTGGGGAGATGCAGGACAACTAAGTACCGTGACTTAAATGTGATTCTTCTAATGACATGCTGCCACTTTAGGTTTACTCTCACTGTTGATGACCATTAATTGCATTAGTATAAATTCTGTCGGCCGAGTGGGGAGTTTTTAAGTTGGGACTGTCGTTCCCGCATCTCTGCAACTTAAACCCAGTTTACACCTTTGTCCTGAAGGTCAAACTCTGACTCACATATTGATGTTTCCACTTAGCTTCGGTTGAAGACTTTTCCAGTTGCCTCCTTTTCTCAAGTTGCACTTTTTTGCCAGCTTGTAGTTTTCTTCACAGGCAGCTCCTCTGCTAGCCAAAATATGGTCAATATCGATGTGAGACTTTGTCTTTAAAGTGACATAATATATGTACAATGTAGACAGGAGACAATGTCACCAATAAATTGTCATGGTTTGACAAA
>XM_036967134.1
CAAAATCACTAATCTGTAAAAATAACGGATGGACACACTATAAACAACTAACTGTCGATAACAAGCACATCCATATTTATTCAGACTTGTGCTTTCTACTTCCGCCTGAACGTGGACGAGACAAGGAAGGAATTAGAGGACGCTTGTACCACAATCACATTGAAGGAACCAGGGAGATTTAGCTACCTAGCGCCGTTGTTTGGACAAAATTGACATGATGCAgctacattttttacatcaagtTTGCCAGTCGCTTTGATCGGGCGTAAATCGTATGAGTTTTatgtagctatctagctagcagtCATATGCAACAAGCAGCCAGTGTACAAGACATATCTTTACAATATTAGATAATAGCTGTTTAGTTAGCTACAGTACTGTTAGCTAGCAAGTTATCTGAAATGGCCAATAAAAGCAGAGCATTGGCGCAGAGGATGCTTCTCATCTGTAGACAGGAGACCAGGGCATATTCACTATGGCGAAGGACAACAATTCCGATTGCACATCTGATCAAACCCAGCATTATGCATTTGAAGTTTTCTCTCAATGTCAACAGACACTCAACGTGCACAACAGGTCCTAGCAGCTTGTCCTTTCGGAGTCACACTTGTGGGGAGCTACGGCCTGCTGATGTTGGAGAGGAAGTCACTCTGTGTGGCTGGGTTCAATACCTGAGACAGGATTTATTTGTTATCATGAGAGATTTCAGTGGCTTGGCACAAATTCTTATCCCTCAAGACGAGGACAAAATGAATCTGAAAACAGCCTTGTGTGACTTACCACCTGAATCAGTGATCAGGGTGAAAGGCACGGTCAGGCTTCGACCAGATGGACAAGAGAACAAGGAGATGCCCACCGGAGAGATCGAGGTTCTTGCAGAGAGTGTGGAGATTCTAAATGTCTGCCGTAAGCTTCCCTTTGAAATCAAAGATTTTGTGAAAAAATCTGAATCCCTTCGGATGCAGTATCGCTATCTGGACCTTCGTTCGTCACAAATGCAGTATAACCTGAGGCTGAGGTCCCAGCTAGTGATGAAGATGAGAGAGTACCTGTGCAATGTGCATGGGTTTGTGGATGTTGAAACTCCCACCTTATTTAAGAGGACTCCAGGGGGTGCAAAGGAGTTTGTGGTGCCCTCAAGAGAACCTGGTCGATTTTACTCCCTGCCTCAGAGTCCTCAGCAGTTTAAACAGCTTCTCATGGTGGCTGGCATTGACAGGTACTTTCAACTTGCCCGGTGCTACAGAGATGAGGGTTCCAAACCAGACAGACAACCAGAATTTACTCAGGTGGACATTGAGATGTCCTTTGTGGATCAAGCTGGAATCCGAGGTCTGATTGAGGGCTTGGTCCAGTACTCCTGGCCTGTGGAGAAAGATCCTGTCTCCACACCATTCCCCTGCATAACGTATGAAAAAGCAATGAAGGACTATGGAGTGGACAAGCCAGACACACGATTCGCCATGAAGCTCATGGACATCAGTGAAACATTCCACAACACAGAAATAGAGTTCCTTAAAGACGCCCTCAACCAACCAGGAGGATGTATCCAGGCAATCTGTATCCCAGATGGAGCAACATCTGTGTTCAATATTTCACTCCAGAAACATTTGAAGGGCAAAGATCACGAATCCCTGAAGCAAACTGCCAGGACCCAGTTCGGCCAGGAAGTGAGTGTAGTTTTGGTGAAGGCAGATGGTGCATTGAAGTCTCCCCTCAACAGACTCATGCCTGCCTCAGCTAAACAGCAGCTGCTCCAGATGGCCCAGGCCAGACCTGGGGACCTGCTGCTCATCTCTGCTGGGACGCAGGAATGTGTGCGCCCTTTGTTGGGCAAATTGAGGCTTCAATGTGCTGAACTCCTAGAGGACTCCGGTGTGGCTGTTCGAGACCCCTCAGCGTTTCACTTTCTGTGGGTGGTAGACTTCCCACTGTTCCTGCCAAAAGAAGAGGACCCTGATCAGCTTGAGTCAGCCCACCATCCTTTCACTGCACCTCTCCCTGAGGATGCTCATCTCCTGTATTCACTGCCTCACAAGGTACGTGGCCAGCATTACGACCTGGTCCTGAATGGGTGTGAGATTGGAGGAGGATCCATTCGTATTCACAAGGCCTCTGATCAACAGCATGTGCTGGAGACGATCCTCAAGGAGgatccatctctcctttctcacCTGTTAGAGGCACTGGACTCTGGGGCTCCCCCTCATGGTGGTATTGCATTGGGTTTGGACCGATTTCTGTCTATTATTGTCGGAGCCCCCAGCATCAGGGACGTGATTGCCTTCCCCAAATCATTCAGGGGCCATGACCTGATGAGTCATGCTCCAGACTTCGTCTCTGAAGACGAGCTTAAATCCTACCACATCGCTGTCAACTGGCCAGCAGGAGACGAAGGGAACCAGGAGAAATAGACATGGCTGCTGCTACACCTTTGTCCTGAAGCTGAGACTCTGACTCATATTACAGCTGGATTTACATTGGGGAGATGCAGGACAACTAAGTACCGTGACTTAAATGTGATTCTTCTAATGACATGCTGCCACTTTAGGTTTACTCTCACTGTTGATGACCATTAATTGCATTAGTATAAATTCTGTCGGCCGAGTGGGGAGTTTTTAAGTTGGGACTGTCGTTCCCGCATCTCTGCAACTTAAACCCAGTTTACACCTTTGTCCTGAAGGTCAAACTCTGACTCACATATTGATGTTTCCACTTAGCTTCGGTTGAAGACTTTTCCAGTTGCCTCCTTTTCTCAAGTTGCACTTTTTTGCCAGCTTGTAGTTTTCTTCACAGGCAGCTCCTCTGCTAGCCAAAATATGGTCAATATCGATGTGAGACTTTGTCTTTAAAGTGACATAATATATGTACAATGTAGACAGGAGACAATGTCACCAATAAATTGTCATGGTTTGACAAA

Function

symbol description
dars2 Predicted to enable ATP binding activity; aminoacyl-tRNA ligase activity; and nucleic acid binding activity. Predicted to act upstream of or within tRNA aminoacylation for protein translation. Predicted to be located in cytoplasm. Orthologous to human DARS2 (aspartyl-tRNA synthetase 2, mitochondrial).

NR:

description
aspartate--tRNA ligase, mitochondrial

GO: NA

KEGG:

id description
K01876 DARS2, aspS; aspartyl-tRNA synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589527.2 False 2893 mRNA 0.47 17 22795639 22816740
XM_036967134.1 True 2923 mRNA 0.47 17 22795639 22816743

Neighbor

gene id symbol gene type direction distance location
astn1 astn1 coding downstream 268558 22286666 ~ 22527081 (-)
cop1 rfwd2 coding downstream 583213 22202448 ~ 22212426 (-)
tnr tnr coding downstream 670338 21966295 ~ 22125301 (-)
LOC110508740 kiaa0040 coding downstream 847082 21942981 ~ 21948557 (-)
mrps14 mrps14 coding downstream 918930 21873216 ~ 21876709 (-)
LOC110508750 LOC106569069 coding upstream 5329 22822072 ~ 22828641 (-)
LOC110508754 shcbp1l coding upstream 117517 22934260 ~ 22939565 (-)
nmnat2 nmnat2 coding upstream 225795 23042538 ~ 23055346 (-)
LOC110508760 LOC106599438 coding upstream 287328 23104071 ~ 23118323 (-)
LOC110508762 LOC106599443 coding upstream 327476 23144219 ~ 23154829 (-)
G2118394 NA non-coding downstream 1320 22794091 ~ 22794319 (-)
G2118359 NA non-coding downstream 2883 22792419 ~ 22792756 (-)
G2118251 NA non-coding downstream 118224 22677197 ~ 22677415 (-)
G2118250 NA non-coding downstream 120710 22674664 ~ 22674929 (-)
G2118194 NA non-coding downstream 193987 22585748 ~ 22601652 (-)
G2119237 NA non-coding upstream 88441 22905184 ~ 22907635 (-)
G2119393 NA non-coding upstream 216310 23033053 ~ 23038249 (-)
G2119394 NA non-coding upstream 216487 23033230 ~ 23038411 (-)
G2119395 NA non-coding upstream 217028 23033771 ~ 23039094 (-)
G2119398 lamc2 non-coding upstream 220067 23036810 ~ 23041327 (-)
G2118200 brinp2 other downstream 187833 22594533 ~ 22607806 (-)
G2117313 NA other downstream 924586 21870685 ~ 21871053 (-)
G2115838 NA other downstream 1936109 20859140 ~ 20859530 (-)
LOC110508185 LOC106569033 other upstream 508258 23317575 ~ 23353162 (-)
LOC110508783 LOC106599501 other upstream 1848131 24664869 ~ 24677152 (-)
G2120836 NA other upstream 1913931 24730674 ~ 24734987 (-)
G2121444 LOC106599515 other upstream 2327319 25144062 ~ 25148520 (-)
G2121457 NA other upstream 2381505 25198248 ~ 25274626 (-)

Expression


Co-expression Network