dhx9 (dhx9)


Basic Information

Item Value
gene id dhx9
gene name dhx9
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 22914656 ~ 22934260 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589532.2
GCGTCCTAGCCACGCATGCGCCCAAAGTCCAGGCCTGACCGTCTCGTCCCCCAGTGCTATCATGTCTGCCGTCTGAATGGTTTGTATTTGCTAGCCGGCTCGTTTGAAAAAGTATCTGGTGGAGGTCGAGTGGAGAAATACAAATCCGCCATGGCGGACATCAAGAACTTCCTGTATGCTTGGTGTGGGAAGAAGAAACTAACACCCAGCTATGACATTCGAGCCGCTGGAAACAAAAACCGACAGAAGTTTCTGTGTGAGGTTCGTATTGACGGATTCAACTACACTGGAATGGGAAACTCCACCAATAAGAAGGATGCCCAGGCAAATGCTGCTAGAGACTTTGTCAATTATCTTGTCCGAGTTGGAGAAATGAATGCAGCAGAAGTCCCAGCCCTTGGGGCAAGTGGACCTGACTTCAGTGTACCTGACTGTGGAGGAGGGGGTGAAGGAGGGAATGTTGGCTTTGGAAGTCTTCCTCCAAGTGGACCTATCCCTCCTCACCTGGTTGTGAAAGCTGAGCAAGTGAATGCACCTTCTGCGCCAGTCCCAGGTGTCACTGGTTTGGGATATTCGGGCGGTAGCGGCAATTTTTCCGGAGGTGGCTCAAACAGCAATGCTCCGTGGGATCGTGGGGCCAATCTAAAGGACTACTACTCAAAGAGAGATGAGCAGGAGGCACAGGCGACTCTGGAGTCTGAGGAGGTAGATCTGAACGCAGGACTCCATGGCAACTGGACTTTAGAGAACGCCAAGGCCCGTCTGAACCAATTTTTCCAGAAGGAGAAGAATCAAACTGATTACAAATACAGCCAAGTTGGGCCTGACCACAACAGGAGCTTTATTGCTGAGATGCAGTTATTTGTAAGACAGCTTGGCAGAAAGATAATTGCCCGCGAGCATGGCTCTAACAAGAAGCTTGCAGCCCAGTCCTCTGCGCTGTCTATCGTCCGTCAACTTTACCATCTGGGTGTCATTGAGCCTTATTCTGGCGTCACTAAGAAGAAAGAGGGGGAAATTTTGGAAGCTTTTGAGGTGAATGTGGTGGATGAACTGCAACATCAGCTGCAGAGTATGGCCCAAGAACTGGGTGTTGCAATTCCACCTCCGCCACCTGATCCAAGTACTCCAGTGTCTTTGGTCCAAGGGAAGATGGCTGTGTTTGAGCCCTCCCAGAAACAGAGCATGGCCGGGGTGGTGCCGTGGTCCCCTCCGCAAGTCAACTGGAACCCCTGGACCAGCAGCAATATTGACGATGGACCACTAGCATTTTGCACCCCAGAGCAAATCAGCACTGACCTCCATCATGAGCTGACTTATCAATTGGAACAAGATCAAAGCCTACAGAAGGTCATTGGGGAGCGAGACGGGCTTCCAGTGAAGAAATTTGAGGAGGAGATAATGACTGCCGTTCAGGGCAGCTCAGTGGTGATCATTCGAGGGGCGACCGGCTGTGGCAAAACCACCCAGGTTCCTCAGTACATCCTGGATCAGTTCATCAAGAGTGGGAGGGCGTCCGAGTGTAACATTATTGTAACCCAGCCCCGGCGTATCAGTGCAGTGTCTGTGGCAGAGCGTGTTTCCtacgagagaggagaggatgtcgGTAAGAGCTGTGGGTACAGCGTCCGCTTTGAATCCATCCTCCCACGACCCCATGCCAGCATCATGTTCTGCACTGTTGGTGTGTTACTGCGGAAGCTGGAAGCAGGTATTCGCGGGATCAGCCATGTGATTGTGGATGAAATCCACGAGAGAGACATCAATACTGACTTCCTCATGGTGGTGCTGAGGGACGTGGTCCACACCTACCCAGAGGTCCGCATCATCCTCATGTCTGCCACCATCGACACCACCATGTTTAGAGAGTACTTCTTCAACTGCCCTGTCATCGAGGTGTTCGGCCGCACATTCCCAGTACAAGAGTACTTTTTGGAAGATTGTATTCAGATGACACATTTCATTCCACCTCCGAGTGATAGAAAGAGGAAGGACAAGGATGAGgaaggaggagatgaagagGCCAACTGTAATGTGATATGTGGGCCAGAGTACACCCCAGAGACTAAGCGCTCTATGGCCCAGATGAATGAGAAGGAGACTCCCTTTGAGCTGGTGGAGGCCCTGCTGAAGTACATCGAGACCCTCCAGGTGGCCGGGGCTGTGCTCGTCTTCCTGCCCGGCTGGAACCTCATCTACTCCATGCAGAAACACCTGGAGATGAACCCACACTTTGGGAGTCAACGGTACCTGATTCTGCCTCTCCACTCTCAGATCcccagagaggaacagaggagggtATTTGAGCCTGTGCCTGAAAACATCACCAAGGTGATCTTGTCAACAAACATTGCAGAGACCAGTATTACTATCAATGATGTAGTATATGTCATCGACTCTTGCAAGCAGAAAGTGAAACTGTTCACATCTCACAACAACATGACCAACTACGCCACAGTCTGGGGCTCCAAGACCAACCTGGAGCAGAGGAAGGGTCGTGCCGGCCGCGTCCGGGCTGGCTTCTGCTTTCATCTGTGTAGCAGAGCACGCTTCGACAAACTGGAGACCCATATGACCCCTGAGATATTCCGTACTCCTCTCCACGAGGTAGCCCTGAGCATCAAGCTGCTGAGACTAGGAGCCATTGGCCATTTCCTTTCCAAGGCCATCGAGCCCCCTCCCCTGGACGCGGTTATAGAGGCAGAACACACACTGAGAGAACTGGATGCTTTGGACACAAATGACGAGTTGACTCCGCTTGGTCGGATCCTTGCAAAGCTTCCAATCGAGCCGCGTCTGGGGAAGATGATGATTATGGGCTGCATATTCAaTGTTGGAGATGCGGTGTGCACGATCTCAGCAGCCTCCTGCTTCCCAGAGCCCTTCATCAATGATGGCAAGCGCTTGGGCTATGTGCACCGCAACTTTGCTGGCACCCGCTTCTCAGACCACGTGGCCCTCCTGTCAGTCTTCCAGGCTTGGGACGATGTGAGAATGGGAGGTGAGGATGCAGAGTCCAGATTCTGTGAACACAAGAGGCTCAACATGTCCACACTGAGGATGACCTGGGAGGCAAAAGTGCAGCTGAAGGAGATCCTCATCAACTCTGGCTTCCCTGAggAGTGCTTGATGACACAGATGTTCAATAACGTTGGACCCGACAACAACCTTGACGTGGTCGTCTCTCTCCTGACATACGGCTCCTATCCCAACGTGTGCTACCACAAGGAGAAGAGGAAGATTCTCACCACTGAGGGGCGCAATGCCCTCATCCACAAATGCTCCGTCAACTGCCCCTTCAGCAGCCAGGACATGACCTACCCATCACCGTTCTTCGTCTTTAGCGAAAAGATCCGGACTCGAGCCATCTCAGCCAAAGGAATGACACTAGTCAGCCCACTCCAGCTGATCTTGTTTGCCTCCAAGAAAATCACATCAAACGGGGAAATCATTGAACTGGATGATTGGATCAAACTGAAGATACCGCATAACGTGGCTGGCTGCATAGCTGCTTTGAGGGCTGGAATGGAGGCACTTGTTGTAGAAGTCACCAAAGACCCTGAGTACATCAAACAGCTGGATCCCACAAACGAGCGCATGCTCAACATCATCCGTCAAATCTCCAAGCCCTCCGCAGCTGGGCTTAACCTCATGGTCAACAATAAACGTTTTGGAGATGGTCCACGTCCTCCCAAGATGGGCAGGTTTGACGGAGGAGGCGGTGGAGGATACCAGGGAGGAGGCGGTGGAGGATACAGGGGAGGAGGTTACAGAGGCGGTGGAGGATACCAGGGCGGTGGAGGATACCAGGGCGGCGGCGGATACAGGGGCGGTGGTGGAGGTTACAGAGGCGGTGGTGGAGGTTACAGAGGCGGGGGTGGAGGTtacagaggtggtggtggttatggagGGGGGAACAGGGGTGGGGGGAACAGGGGTGGTTATGGAGGGGGGAACAGGGGTGGGGGTGGTTATGGAGGGGGCCAGGGATATTAGGGCATTTGAAGGTTAGCTTTTTAGATGTTGTTCATTACATGACGTTTGAGTGTTTTTGGCTGTAATGTTAGAAGTGGTTCTATGTAAGGATATTTTAGTTTAGCCTTttgtgacacccccccc
>XM_036966221.1
CATGCGCCCAAAGTCCAGGCCTGACCGTCTCGTCCCCCAGTGCTATCATGTCTGCCGTCTGAATGAGAAATACAAATCCGCCATGGCGGACATCAAGAACTTCCTGTATGCTTGGTGTGGGAAGAAGAAACTAACACCCAGCTATGACATTCGAGCCGCTGGAAACAAAAACCGACAGAAGTTTCTGTGTGAGGTTCGTATTGACGGATTCAACTACACTGGAATGGGAAACTCCACCAATAAGAAGGATGCCCAGGCAAATGCTGCTAGAGACTTTGTCAATTATCTTGTCCGAGTTGGAGAAATGAATGCAGCAGAAGTCCCAGCCCTTGGGGCAAGTGGACCTGACTTCAGTGTACCTGACTGTGGAGGAGGGGGTGAAGGAGGGAATGTTGGCTTTGGAAGTCTTCCTCCAAGTGGACCTATCCCTCCTCACCTGGTTGTGAAAGCTGAGCAAGTGAATGCACCTTCTGCGCCAGTCCCAGGTGTCACTGGTTTGGGATATTCGGGCGGTAGCGGCAATTTTTCCGGAGGTGGCTCAAACAGCAATGCTCCGTGGGATCGTGGGGCCAATCTAAAGGACTACTACTCAAAGAGAGATGAGCAGGAGGCACAGGCGACTCTGGAGTCTGAGGAGGTAGATCTGAACGCAGGACTCCATGGCAACTGGACTTTAGAGAACGCCAAGGCCCGTCTGAACCAATTTTTCCAGAAGGAGAAGAATCAAACTGATTACAAATACAGCCAAGTTGGGCCTGACCACAACAGGAGCTTTATTGCTGAGATGCAGTTATTTGTAAGACAGCTTGGCAGAAAGATAATTGCCCGCGAGCATGGCTCTAACAAGAAGCTTGCAGCCCAGTCCTCTGCGCTGTCTATCGTCCGTCAACTTTACCATCTGGGTGTCATTGAGCCTTATTCTGGCGTCACTAAGAAGAAAGAGGGGGAAATTTTGGAAGCTTTTGAGGTGAATGTGGTGGATGAACTGCAACATCAGCTGCAGAGTATGGCCCAAGAACTGGGTGTTGCAATTCCACCTCCGCCACCTGATCCAAGTACTCCAGTGTCTTTGGTCCAAGGGAAGATGGCTGTGTTTGAGCCCTCCCAGAAACAGAGCATGGCCGGGGTGGTGCCGTGGTCCCCTCCGCAAGTCAACTGGAACCCCTGGACCAGCAGCAATATTGACGATGGACCACTAGCATTTTGCACCCCAGAGCAAATCAGCACTGACCTCCATCATGAGCTGACTTATCAATTGGAACAAGATCAAAGCCTACAGAAGGTCATTGGGGAGCGAGACGGGCTTCCAGTGAAGAAATTTGAGGAGGAGATAATGACTGCCGTTCAGGGCAGCTCAGTGGTGATCATTCGAGGGGCGACCGGCTGTGGCAAAACCACCCAGGTTCCTCAGTACATCCTGGATCAGTTCATCAAGAGTGGGAGGGCGTCCGAGTGTAACATTATTGTAACCCAGCCCCGGCGTATCAGTGCAGTGTCTGTGGCAGAGCGTGTTTCCtacgagagaggagaggatgtcgGTAAGAGCTGTGGGTACAGCGTCCGCTTTGAATCCATCCTCCCACGACCCCATGCCAGCATCATGTTCTGCACTGTTGGTGTGTTACTGCGGAAGCTGGAAGCAGGTATTCGCGGGATCAGCCATGTGATTGTGGATGAAATCCACGAGAGAGACATCAATACTGACTTCCTCATGGTGGTGCTGAGGGACGTGGTCCACACCTACCCAGAGGTCCGCATCATCCTCATGTCTGCCACCATCGACACCACCATGTTTAGAGAGTACTTCTTCAACTGCCCTGTCATCGAGGTGTTCGGCCGCACATTCCCAGTACAAGAGTACTTTTTGGAAGATTGTATTCAGATGACACATTTCATTCCACCTCCGAGTGATAGAAAGAGGAAGGACAAGGATGAGgaaggaggagatgaagagGCCAACTGTAATGTGATATGTGGGCCAGAGTACACCCCAGAGACTAAGCGCTCTATGGCCCAGATGAATGAGAAGGAGACTCCCTTTGAGCTGGTGGAGGCCCTGCTGAAGTACATCGAGACCCTCCAGGTGGCCGGGGCTGTGCTCGTCTTCCTGCCCGGCTGGAACCTCATCTACTCCATGCAGAAACACCTGGAGATGAACCCACACTTTGGGAGTCAACGGTACCTGATTCTGCCTCTCCACTCTCAGATCcccagagaggaacagaggagggtATTTGAGCCTGTGCCTGAAAACATCACCAAGGTGATCTTGTCAACAAACATTGCAGAGACCAGTATTACTATCAATGATGTAGTATATGTCATCGACTCTTGCAAGCAGAAAGTGAAACTGTTCACATCTCACAACAACATGACCAACTACGCCACAGTCTGGGGCTCCAAGACCAACCTGGAGCAGAGGAAGGGTCGTGCCGGCCGCGTCCGGGCTGGCTTCTGCTTTCATCTGTGTAGCAGAGCACGCTTCGACAAACTGGAGACCCATATGACCCCTGAGATATTCCGTACTCCTCTCCACGAGGTAGCCCTGAGCATCAAGCTGCTGAGACTAGGAGCCATTGGCCATTTCCTTTCCAAGGCCATCGAGCCCCCTCCCCTGGACGCGGTTATAGAGGCAGAACACACACTGAGAGAACTGGATGCTTTGGACACAAATGACGAGTTGACTCCGCTTGGTCGGATCCTTGCAAAGCTTCCAATCGAGCCGCGTCTGGGGAAGATGATGATTATGGGCTGCATATTCAaTGTTGGAGATGCGGTGTGCACGATCTCAGCAGCCTCCTGCTTCCCAGAGCCCTTCATCAATGATGGCAAGCGCTTGGGCTATGTGCACCGCAACTTTGCTGGCACCCGCTTCTCAGACCACGTGGCCCTCCTGTCAGTCTTCCAGGCTTGGGACGATGTGAGAATGGGAGGTGAGGATGCAGAGTCCAGATTCTGTGAACACAAGAGGCTCAACATGTCCACACTGAGGATGACCTGGGAGGCAAAAGTGCAGCTGAAGGAGATCCTCATCAACTCTGGCTTCCCTGAggAGTGCTTGATGACACAGATGTTCAATAACGTTGGACCCGACAACAACCTTGACGTGGTCGTCTCTCTCCTGACATACGGCTCCTATCCCAACGTGTGCTACCACAAGGAGAAGAGGAAGATTCTCACCACTGAGGGGCGCAATGCCCTCATCCACAAATGCTCCGTCAACTGCCCCTTCAGCAGCCAGGACATGACCTACCCATCACCGTTCTTCGTCTTTAGCGAAAAGATCCGGACTCGAGCCATCTCAGCCAAAGGAATGACACTAGTCAGCCCACTCCAGCTGATCTTGTTTGCCTCCAAGAAAATCACATCAAACGGGGAAATCATTGAACTGGATGATTGGATCAAACTGAAGATACCGCATAACGTGGCTGGCTGCATAGCTGCTTTGAGGGCTGGAATGGAGGCACTTGTTGTAGAAGTCACCAAAGACCCTGAGTACATCAAACAGCTGGATCCCACAAACGAGCGCATGCTCAACATCATCCGTCAAATCTCCAAGCCCTCCGCAGCTGGGCTTAACCTCATGGTCAACAATAAACGTTTTGGAGATGGTCCACGTCCTCCCAAGATGGGCAGGTTTGACGGAGGAGGCGGTGGAGGATACCAGGGAGGAGGCGGTGGAGGATACAGGGGAGGAGGTTACAGAGGCGGTGGAGGATACCAGGGCGGTGGAGGATACCAGGGCGGCGGCGGATACAGGGGCGGTGGTGGAGGTTACAGAGGCGGTGGTGGAGGTTACAGAGGCGGGGGTGGAGGTtacagaggtggtggtggttatggagGGGGGAACAGGGGTGGGGGGAACAGGGGTGGTTATGGAGGGGGGAACAGGGGTGGGGGTGGTTATGGAGGGGGCCAGGGATATTAGGGCATTTGAAGGTTAGCTTTTTAGATGTTGTTCATTACATGACGTTTGAGTGTTTTTGGCTGTAATGTTAGAAGTGGTTCTATGTAAGGATATTTTAGTTTAGCCTTttgtgacacccccccc

Function

symbol description
dhx9 Predicted to enable 3'-5' DNA helicase activity and RNA binding activity. Acts upstream of or within response to virus. Predicted to be part of ribonucleoprotein complex. Predicted to be active in cytoplasm and nucleolus. Orthologous to human DHX9 (DExH-box helicase 9).

NR:

description
ATP-dependent RNA helicase A isoform X1

GO:

id name namespace
GO:0006200 obsolete ATP catabolic process biological_process
GO:0005524 ATP binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K13184 DHX9; ATP-dependent RNA helicase A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589532.2 False 4119 mRNA 0.52 28 22914656 22934260
XM_036966221.1 True 4051 mRNA 0.52 28 22914670 22934260

Neighbor

gene id symbol gene type direction distance location
rasal2 NA coding upstream 698 22831090 ~ 22913958 (+)
ankrd45 ankrd45 coding upstream 84205 22828736 ~ 22830451 (+)
cenpl cenpl coding upstream 94531 22816873 ~ 22820125 (+)
LOC110508746 brinp2 coding upstream 250673 22547186 ~ 22663983 (+)
LOC118944815 NA coding upstream 525152 22385440 ~ 22389504 (+)
lamc1 LOC106599430 coding downstream 7472 22941732 ~ 23022726 (+)
lamc2 lamc2 coding downstream 90513 23024773 ~ 23042412 (+)
smg7 smg7 coding downstream 122518 23056778 ~ 23087821 (+)
LOC110508761 LOC106599440 coding downstream 168234 23102409 ~ 23103987 (+)
LOC110508282 LOC106599615 coding downstream 262755 23197015 ~ 23204478 (+)
G2118342 NA non-coding upstream 122841 22791307 ~ 22791815 (+)
G2118333 NA non-coding upstream 130762 22783689 ~ 22783894 (+)
G2118330 NA non-coding upstream 132805 22781554 ~ 22781851 (+)
G2118128 NA non-coding upstream 244710 22669621 ~ 22669946 (+)
G2118024 NA non-coding upstream 374730 22539655 ~ 22539926 (+)
G2118532 NA non-coding downstream 143419 23077679 ~ 23201786 (+)
G2118550 NA non-coding downstream 180450 23114710 ~ 23117051 (+)
G2118530 NA non-coding downstream 194385 23128645 ~ 23159265 (+)
G2118573 NA non-coding downstream 225742 23160002 ~ 23162200 (+)
G2118577 NA non-coding downstream 234192 23168452 ~ 23169935 (+)
G2116347 NA other upstream 1539578 21374495 ~ 21375078 (+)
LOC110508722 LOC106569260 other upstream 2072653 20840508 ~ 20842019 (+)
G2115369 NA other upstream 2472487 20441733 ~ 20442169 (+)
LOC110508695 LOC106599333 other upstream 3277903 19623468 ~ 19636825 (+)
G2113578 NA other upstream 3838238 19076077 ~ 19076418 (+)
G2118574 NA other downstream 229606 23163866 ~ 23164323 (+)
LOC110508774 LOC106599485 other downstream 1166897 24101070 ~ 24137027 (+)
G2121837 NA other downstream 2786180 25720440 ~ 25721674 (+)

Expression


Co-expression Network