nmnat2 (nmnat2)


Basic Information

Item Value
gene id nmnat2
gene name nmnat2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 23042538 ~ 23055346 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589537.2
CTCTGTATCCTGCGAGGAGACTTGGACACTGCCGCATCCAAATTAACCTCGCCTCTCTGCGGTCGCTAACAGCAAAACAAAGAAGAACAAATCGGTAGTTGCAGAAAAAGAGACTCATATCCAATCATATCATGACGGACAACACTAAAACGCACGTTATTTTGCTGTCATGTGGAAGTTTTAACCCCATCACTAAAGGACACATTCATATGTTTGAAAAAGCCAGAGAATACCTGCACAAAACAGGGAAGTTCATTGTGATTGGGGGTATCATTTCACCTGTACATGACTCCTATGGCAAACCGGGCCTCGTCCCCAGCAGACATCGTCTCACCATGTGTCAACTGGCAGTCCAGTCATCCGACTGGATCAGAGTGGATCCCTGGGAGTGCTACCAGGACACATGGCAGACTACATGCAGCGTGCTGGAGCATCATCGTGACCTCATGAAGAGAGTCACAGGGTGCATTCTGTCCAATGTGAACACACCGTCTACAACTCCAGTGATCGGCCAACCACAGAATGAGACTCAGACTGCCATCTatcagaaccacaacacaatgaaCAACAAGCCCACTGCCATTAAGCTTTGGGGGAAGATGAGTGAGAGCTTGGGCAAAATTTGCTGTGTTCGCCCCCACATTGATCGTTTTACCTTTGTGGATGAAAATGCCAACCTTGGCCCTGCAATGCGATATGAGGAAATTGAGTTGCGCATCTTGCTTCTGTGTGGCAGTGATCTCCTGGAGTCATTCTGCATCCCTGGCTTATGGAAAGACAGTGATATGGAGGTGATTGTGGGAGACTTTGGGATTGTTGTTGTGCCTCGGGATGGAGTTGATACAGAGAGGATAATGAACCATTCCTCTGTGCTGCGCAAGAACAAGGATAACATCACAGTAGTAAAAGATGATGCCAACCACCCTATGTCCATTGTCAGCTCAACCAAGAGCAGACTGGCCCTGCAGCACGGGGACGGTCATGTGGTGGACTACCTGAACCAGACAGTCATCGACTACATCCTGCAGAGTCAGCTCTACATCAATGCCTCTGGATAGAAACTACTGCTCCGGCCTACTGTCAaattgtccctgtctgtctctcatgtAAAATGTATACTCCTCTTGAGCTACTGCTTTTCCATTCGAAGGAGCATTAGATATGCATTTCCCTTCTTACTGTATCATAATGACTCATCGGACCTGTGGATGTACTGTACAGCGAGGTGCTTAAGAGCTGTGTGTACAGTGGACCACCTTCACAACTGACTTTGTGTAGGCTGCATGGGATAGTGTTtctgtctgtcccaaatggcaccctaatccctatatagtgcactacttttaaccagggcctatagggctctggtaaaaaataGTGCACTTTTTATtcaatatggtgccatttgggatgcaaccttgGTGTCATGAAGAGAGGGTGCAGAGATTGTTACCTGATGAATGTTGACCTTTGCTGCTTGATTTAAATCTGTCGATTCTTAGACTGCATGCTTAGaacgttttttttgttttggcATGAGTACTTATTCACTTCGTAGATATATGTTGTGAAAGTGTTTGCAAAAAGACAAACATAGTGGGTACCCACCTCTCACTTCATTTTCTATTCACTATAATTCTACTGTATGTACAGaagtatctgtattgatgtatCTGTGATTGCATATCAATGCCTAAATGTTTTGTCTTCAGTGGGCATTCGTGCAAAATGTAGATTTGTTTGCACATAAGACAATGATTTGTGCATTGATTTATTTTTGTGTGCAAAGGATTTTGCACATTTCTCCTGCTTGTCACTAAGCAAATTACCGCGACTCCCAAAGCAAATGCAATGAACCTCTTTCTTACTATGTGCTATGTAGCTAGTTACTTGAGATTCTTACAAAAATGTGTATAGTGGAAAAAACAACAGCACAAACTACAGAAGTGCATTCCATGTGCCTGGGGATGAATTCACAGATATAAGTCTCCCGCTCCCTTGCACTCAACACTGTCATAATATTATCAACCTGATATAAAATGAGCTCTAATGTTGTTCTGCAAAGGAAGTGGGGACATAGCCTTTGATCAATAGTTTCTTAAGGAAGCTTCTCATGCTCAGTGCCAGGACTCTTTAGACAGTTCAGTTTAATGGGCATTGAGTATAACCATTAATTTGTGCAGTAATGATTTCACAGGGTAAtagggtgtatacagtattggtGTATACAGGACATTGGTTGCACCTTAGTTGGAGAGTACGGGCtcttggtaatggctggagcggaataagtggaatggtattaaatacatcaaacacatggtttccatgccaTTCCTTTCGCTCCGTTCCTGCAATTATGAGCTGtcgtcccctcagcagcctcctgtggtgcaCATTGTGCCCAATTGGTCAATGCAAAATAATGACGATTATTTGGTTTAATTAGTGTCTAAATGTTACCAAAGCAACTTGCATTCATATATAGCTTTACAAGTGTCAATTTGGCTAAGAATATTAGGTTATTCAATCTTAATATCAGATGAAGCTAAATACATTCCACTGCTTCCTGCAATCTCACAGTTCATCATTTATAAGAAATGGACACACAAGTGCTACTAGTTGTCAATATTGTAGCGTTGTATAAGCCTGGCAAGACTATCAATAGTACACTGTGTGTAAGATGTTCTAGACAAACAATATTGCTTCTTTATGTGTCATCCGAGTGTAATGAACAAACTGTACTGGGTCCAATATCCCTTCAAGCAGATGGTCTTTATACATGCATCCCTAGAGTCTTTCTATCAAATACACGACATCAGTTATTTGGTATTCTTTAAAGACTGGTTTAGATAAACAAGATGTGGAAAATCTGATAAAATAAGCATCGTCGTGGTCCTAGTAATAGGGCAATGTTTAGTATAATAGTCTCAGCCCACTGGGCAAAGATATTTCAACATCTAGTTTGGATTtaaatttggttgagttgtcaactaacgtgaattcaacacgaaatgtaaaaaaaatctaaatctccATGTCATTAAATTTAGGtgaaaagttgggtgaaaaaaatactaaattccAATACGTTGATGACTTTCTGCAAATCCAATAttttttccacgttgattcaacgtcatcacattgattttgtgttgttgaactgatgtggaAACAACCTTGATTAAACCAGTGTTTGCCCAGTGGGAGAGAAGGTCTCATAGAACCTGAGGAGATTGTATGAGTAGATGATTTATAGATATAATATGAAGAGATGTTTGATTTATATTTGATTCTGTTCATTGAATTATTTGGTAAGGAGTCctgaaaacatacattttttggaATCCTATGTAAAATGAGCTACAATTCCACTTTCAGATCTGGGTTGGAAATGATTTGTATTTTGGCATCTTAGACTgtggactgactggctgacacAATATAACATCCTCAGTCTCTCAATACCTCCATAATAAACCAAGTGTGTAACAATA

Function

symbol description
nmnat2 Predicted to enable nicotinamide-nucleotide adenylyltransferase activity and nicotinate-nucleotide adenylyltransferase activity. Predicted to be involved in NAD biosynthetic process. Predicted to act upstream of or within pyridine nucleotide biosynthetic process. Predicted to be located in Golgi membrane; axon; and cytoplasmic vesicle membrane. Predicted to be active in Golgi apparatus. Is expressed in cranial ganglion; neurons; retina; retinal ganglion cell layer; and trigeminal placode. Orthologous to human NMNAT2 (nicotinamide nucleotide adenylyltransferase 2).

NR:

description
nicotinamide/nicotinic acid mononucleotide adenylyltransferase 2-like

GO:

id name namespace
GO:0009435 NAD biosynthetic process biological_process
GO:0005794 Golgi apparatus cellular_component
GO:0004515 nicotinate-nucleotide adenylyltransferase activity molecular_function
GO:0005524 ATP binding molecular_function

KEGG:

id description
K06210 NMNAT; nicotinamide mononucleotide adenylyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589537.2 True 3500 mRNA 0.41 11 23042538 23055346

Neighbor

gene id symbol gene type direction distance location
LOC110508754 shcbp1l coding downstream 102973 22934260 ~ 22939565 (-)
LOC110508750 LOC106569069 coding downstream 213897 22822072 ~ 22828641 (-)
dars2 dars2 coding downstream 225795 22795639 ~ 22816743 (-)
astn1 astn1 coding downstream 515457 22286666 ~ 22527081 (-)
cop1 rfwd2 coding downstream 830112 22202448 ~ 22212426 (-)
LOC110508760 LOC106599438 coding upstream 48725 23104071 ~ 23118323 (-)
LOC110508762 LOC106599443 coding upstream 88873 23144219 ~ 23154829 (-)
LOC110508763 LOC106599445 coding upstream 104810 23160156 ~ 23190193 (-)
LOC110508765 crf1 coding upstream 155492 23210838 ~ 23212507 (-)
LOC110508766 LOC106599449 coding upstream 191321 23246667 ~ 23253906 (-)
G2119398 lamc2 non-coding downstream 1211 23036810 ~ 23041327 (-)
G2119395 NA non-coding downstream 3444 23033771 ~ 23039094 (-)
G2119394 NA non-coding downstream 4127 23033230 ~ 23038411 (-)
G2119393 NA non-coding downstream 4289 23033053 ~ 23038249 (-)
G2119237 NA non-coding downstream 134903 22905184 ~ 22907635 (-)
G2119432 NA non-coding upstream 36977 23092323 ~ 23174530 (-)
LOC110508185 LOC106569033 non-coding upstream 262232 23317575 ~ 23353162 (-)
G2119699 NA non-coding upstream 556676 23612022 ~ 23613195 (-)
G2119766 NA non-coding upstream 672767 23728113 ~ 23732967 (-)
G2119795 NA non-coding upstream 725607 23780953 ~ 23781185 (-)
G2118200 brinp2 other downstream 434732 22594533 ~ 22607806 (-)
LOC110508740 kiaa0040 other downstream 1094280 21942981 ~ 21948557 (-)
mrps14 mrps14 other downstream 1165888 21873216 ~ 21876709 (-)
G2117313 NA other downstream 1171485 21870685 ~ 21871053 (-)
G2115838 NA other downstream 2183008 20859140 ~ 20859530 (-)
LOC110508783 LOC106599501 other upstream 1609528 24664869 ~ 24677152 (-)
G2120836 NA other upstream 1675328 24730674 ~ 24734987 (-)
G2121444 LOC106599515 other upstream 2088716 25144062 ~ 25148520 (-)
G2121457 NA other upstream 2142902 25198248 ~ 25274626 (-)

Expression


Co-expression Network