Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110508795 |
| gene name | LOC106599535 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 26628352 ~ 26656110 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: PERQ amino acid-rich with GYF domain-containing protein 2-like isoform X1 |
| id | description |
|---|---|
| K18730 | GIGYF; PERQ amino acid-rich with GYF domain-containing protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021589621.2 | False | 5030 | mRNA | 0.57 | 28 | 26628352 | 26656110 |
| XM_021589622.2 | False | 5015 | mRNA | 0.57 | 28 | 26628352 | 26656110 |
| XM_021589623.2 | False | 5009 | mRNA | 0.57 | 28 | 26628352 | 26656110 |
| XM_036966043.1 | False | 5162 | mRNA | 0.57 | 28 | 26628352 | 26656110 |
| XM_036966044.1 | False | 5156 | mRNA | 0.57 | 28 | 26628352 | 26656110 |
| XM_036966045.1 | False | 5147 | mRNA | 0.57 | 28 | 26628352 | 26656110 |
| XM_036966046.1 | False | 5132 | mRNA | 0.57 | 28 | 26628352 | 26656110 |
| XM_036966047.1 | False | 5120 | mRNA | 0.57 | 28 | 26628352 | 26656110 |
| XM_036966048.1 | False | 5069 | mRNA | 0.57 | 28 | 26628352 | 26656110 |
| XM_036966050.1 | False | 5060 | mRNA | 0.57 | 28 | 26628352 | 26656110 |
| XM_036966052.1 | False | 5018 | mRNA | 0.57 | 28 | 26628352 | 26656110 |
| XM_036966051.1 | True | 6556 | mRNA | 0.53 | 28 | 26628532 | 26656110 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnaw-cca-61 | NA | coding | upstream | 3039 | 26625242 ~ 26625313 (+) |
| LOC110508792 | fam227a | coding | upstream | 511253 | 26099457 ~ 26117099 (+) |
| LOC110508192 | LOC106599523 | coding | upstream | 1297127 | 25283026 ~ 25331225 (+) |
| LOC118944876 | NA | coding | upstream | 1362442 | 25264448 ~ 25265910 (+) |
| LOC110508787 | LOC106599517 | coding | upstream | 1425032 | 25160851 ~ 25203320 (+) |
| LOC110508796 | LOC106599541 | coding | downstream | 505 | 26656615 ~ 26675681 (+) |
| LOC110508797 | LOC106599544 | coding | downstream | 23681 | 26679791 ~ 26688506 (+) |
| LOC110508800 | LOC106599548 | coding | downstream | 51267 | 26707377 ~ 26709568 (+) |
| LOC110508195 | LOC106599554 | coding | downstream | 126815 | 26782925 ~ 26909897 (+) |
| LOC110508806 | LOC106570393 | coding | downstream | 188924 | 26845034 ~ 26845490 (+) |
| G2122853 | NA | non-coding | upstream | 8463 | 26619666 ~ 26619889 (+) |
| G2122851 | NA | non-coding | upstream | 9395 | 26618587 ~ 26618957 (+) |
| G2122290 | NA | non-coding | upstream | 69930 | 26557905 ~ 26558422 (+) |
| G2122277 | NA | non-coding | upstream | 91757 | 26536207 ~ 26536595 (+) |
| G2122262 | NA | non-coding | upstream | 133340 | 26494812 ~ 26495012 (+) |
| G2122897 | NA | non-coding | downstream | 48178 | 26704288 ~ 26704700 (+) |
| G2122898 | NA | non-coding | downstream | 48660 | 26704770 ~ 26704988 (+) |
| G2122902 | NA | non-coding | downstream | 56323 | 26712433 ~ 26712709 (+) |
| G2122903 | NA | non-coding | downstream | 56715 | 26712825 ~ 26713391 (+) |
| G2122910 | NA | non-coding | downstream | 65095 | 26721205 ~ 26749161 (+) |
| G2122177 | NA | other | upstream | 253792 | 26357538 ~ 26374560 (+) |
| G2121837 | NA | other | upstream | 906678 | 25720440 ~ 25721674 (+) |
| LOC110508774 | LOC106599485 | other | upstream | 2517642 | 24101070 ~ 24137027 (+) |
| G2118574 | NA | other | upstream | 3464029 | 23163866 ~ 23164323 (+) |
| LOC110508761 | LOC106599440 | other | upstream | 3525019 | 23102409 ~ 23103987 (+) |
| G2123101 | NA | other | downstream | 286090 | 26942200 ~ 26945187 (+) |
| G2123174 | NA | other | downstream | 445202 | 27101312 ~ 27104270 (+) |
| G2123170 | NA | other | downstream | 449924 | 27106034 ~ 27109282 (+) |
| LOC110508827 | LOC106599210 | other | downstream | 1064490 | 27720549 ~ 27725061 (+) |
