ppp1r7 (ppp1r7)


Basic Information

Item Value
gene id ppp1r7
gene name ppp1r7
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 27051258 ~ 27055816 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589644.2
TTATGACCAGTGGCGCACCCCTTTAGAAGGCAGCCTCCTGATTGACTGAGGAGATTACCAATAAAAAGGGAGGGTTATCAGGAAACAAACATGGCTACTCTGTTTGTTGGAGAGCCGCAAGAGATGGAAGGACTGCCTGATTGACCCTGGCTGTGCCTCCCCATCTGTCCTCTATGTGCAGTGGACCGGAAGGGCGAGTCAGAGGAGTCTGGAGATGATGAGACCAGGAGGAAGAGCATCAATGGGGAGGTTGATGTCAATCAGCCCCATACCACAGTTAAAGAGGAGTCTCCTGTTGAAATGGATACCATAATTCTGGACCCAGAGGAagagGATGTTGATCTTGTCCACTGTCGTATTGGGAAGATTGAGGGACTGGGGGTGTTGAGGAAGGCGAAGACGCTCTCTCTAAGGCAGAACCTGATCAAGATGATTGAAAACCTGGAGACGTTAGTGATGCTGAAGGAACTTGATCTCTACGACAACCAGATCCGCAAACTTGAGAACCTGCAGACCCTCAAAGAGCTGGACCAGCTGGACGTGTCCTTCAATCTACTGAGGAAGGTGGAGGGTCTGGAGAGTCTGACGGGGCTAAAGAAGCTCTTTCTGCTGCACAACAAGATCAGCCACATCGCCAACCTGGACCACCTCACCGGCCTGGAGATGTTGGAGCTGGGCTCCAACCGCATCCGGCTAATAGAGAACTTGGATGGGCTGTCCTCGTTGACGAGTTTGTTTCTGGGCACCAATAAGATCACTCAGCTGCAGCATCTGGAAGGCCTTCACAACCTGACAGTCCTCAGCATCCAGAGTAACCGCATCACCAAGATGGAGGGTCTGCAGGGTCTGGTCAACCTGAAGGAACTCTACCTGAGTCACAACGGCATCGAGGTCATTGAGGGCCTGGAGAACAATAAAAAGCTCACAACTCTCGACATCGCAGCCAACCGGGTAAAGAAAATTGAAAACATCAGCCATCTAACAGACCTACAGGAATTCTGGATGAATGATAATCAGCTAGAGAACTGGTCAGATCTAGATGAGCTGAAGAGTTCCAAGGCCCTGGAGACGGTGTACCTGGAGAGGAACCCCTTGCAGAAGGACCCCCAATATCGCAGGAAGATTATGCTGGCTCTGCCCACCGTACGCCAGATCGACGCCGCCTTCATCCGCTTTTGACCGGGCCACACCTCACACCCCTACCTTGGTGTCCCTCCACTCACCGTTCTTCCCCTGCAACTGCAAAATGGACCTCAGCTTACTGCACACAGACTCATTCACCACAGGCACACATCTACAGATACAGATGAGTGTCCTTGTATACCACACActtcagcacacacacattccGACCATCACGTTTCACTTGCCTTACCGTCTCATGTAAAACACGCATGTACACATTTACACTCACCATCTGATCTATGCTATTGTGTTAATGCATAGTAATTTATTGTCAGAATTGGACTGGATAGGGGCTGGGAGGAGTGGGAGCTGCAgggatgtccccccccccccccccccctattttaTTCCCTTTGGATGTGGAGTAGGGAATAATTGCTCTGCCTGCTTGTCCTTTTGTCTGGAGGGATTTAAAAGGAGAAGGCAGTCAGTCTTTCTCCTTTTGTTATTGAAATTGCACTGTACCTGGCAAGAAGGTGGGCTGGCTGTATTGCTGATGGTCTATTTAAGTGTTCATCACATTTCCTTCAGGAAGTTCTAAACCCACCAGACAGTTTTATTTTaaagaataaaatatatatatatattaaatgtgACAATGGTAGCTGCTGCCTTTCGTGGTGCTAATACAGGGTGTATTGGTGTGTATGATACTTGGTGTGGTTGCCATGGGGATATTTAGCTCACCATAACACTAAGTTTCCCTCAAATTGTAGCTACGTTAAACAGAcgctgtatcaaatcaaatcaaattttatttgtcacatacacatggttagcagatgttaatgcgagtgtagcgaaatgcttgtgcttctagttccgacaatgcag
>XM_021589643.2
GTACATTATGACCAGTGGCGCACCCCTTTAGAAGGCAGCCTCCTGATTGACTGAGGAGATTACCAATAAAAAGGGAGGGTTATCAGGAAACAAACATGGCTACTCTGTTTGTTGGAGAGCCGCAAGAGATGGAAGTGGACCGGAAGGGCGAGTCAGAGGAGTCTGGAGATGATGAGACCAGGAGGAAGAGCATCAATGGGGAGGTTGATGTCAATCAGCCCCATACCACAGTTAAAGAGGAGTCTCCTGTTGAAATGGATACCATAATTCTGGACCCAGAGGAagagGATGTTGATCTTGTCCACTGTCGTATTGGGAAGATTGAGGGACTGGGGGTGTTGAGGAAGGCGAAGACGCTCTCTCTAAGGCAGAACCTGATCAAGATGATTGAAAACCTGGAGACGTTAGTGATGCTGAAGGAACTTGATCTCTACGACAACCAGATCCGCAAACTTGAGAACCTGCAGACCCTCAAAGAGCTGGACCAGCTGGACGTGTCCTTCAATCTACTGAGGAAGGTGGAGGGTCTGGAGAGTCTGACGGGGCTAAAGAAGCTCTTTCTGCTGCACAACAAGATCAGCCACATCGCCAACCTGGACCACCTCACCGGCCTGGAGATGTTGGAGCTGGGCTCCAACCGCATCCGGCTAATAGAGAACTTGGATGGGCTGTCCTCGTTGACGAGTTTGTTTCTGGGCACCAATAAGATCACTCAGCTGCAGCATCTGGAAGGCCTTCACAACCTGACAGTCCTCAGCATCCAGAGTAACCGCATCACCAAGATGGAGGGTCTGCAGGGTCTGGTCAACCTGAAGGAACTCTACCTGAGTCACAACGGCATCGAGGTCATTGAGGGCCTGGAGAACAATAAAAAGCTCACAACTCTCGACATCGCAGCCAACCGGGTAAAGAAAATTGAAAACATCAGCCATCTAACAGACCTACAGGAATTCTGGATGAATGATAATCAGCTAGAGAACTGGTCAGATCTAGATGAGCTGAAGAGTTCCAAGGCCCTGGAGACGGTGTACCTGGAGAGGAACCCCTTGCAGAAGGACCCCCAATATCGCAGGAAGATTATGCTGGCTCTGCCCACCGTACGCCAGATCGACGCCGCCTTCATCCGCTTTTGACCGGGCCACACCTCACACCCCTACCTTGGTGTCCCTCCACTCACCGTTCTTCCCCTGCAACTGCAAAATGGACCTCAGCTTACTGCACACAGACTCATTCACCACAGGCACACATCTACAGATACAGATGAGTGTCCTTGTATACCACACActtcagcacacacacattccGACCATCACGTTTCACTTGCCTTACCGTCTCATGTAAAACACGCATGTACACATTTACACTCACCATCTGATCTATGCTATTGTGTTAATGCATAGTAATTTATTGTCAGAATTGGACTGGATAGGGGCTGGGAGGAGTGGGAGCTGCAgggatgtccccccccccccccccccctattttaTTCCCTTTGGATGTGGAGTAGGGAATAATTGCTCTGCCTGCTTGTCCTTTTGTCTGGAGGGATTTAAAAGGAGAAGGCAGTCAGTCTTTCTCCTTTTGTTATTGAAATTGCACTGTACCTGGCAAGAAGGTGGGCTGGCTGTATTGCTGATGGTCTATTTAAGTGTTCATCACATTTCCTTCAGGAAGTTCTAAACCCACCAGACAGTTTTATTTTaaagaataaaatatatatatatattaaatgtgACAATGGTAGCTGCTGCCTTTCGTGGTGCTAATACAGGGTGTATTGGTGTGTATGATACTTGGTGTGGTTGCCATGGGGATATTTAGCTCACCATAACACTAAGTTTCCCTCAAATTGTAGCTACGTTAAACAGAcgctgtatcaaatcaaatcaaattttatttgtcacatacacatggttagcagatgttaatgcgagtgtagcgaaatgcttgtgcttctagttccgacaatgcag

Function

symbol description
ppp1r7 Predicted to be located in nucleus. Predicted to be active in cytoplasm. Is expressed in several structures, including gut; heart; nervous system; otic vesicle; and pectoral fin. Orthologous to human PPP1R7 (protein phosphatase 1 regulatory subunit 7).

NR:

description
protein phosphatase 1 regulatory subunit 7 isoform X1

GO:

id name namespace
GO:0005634 nucleus cellular_component

KEGG:

id description
K17550 PPP1R7, SDS22; protein phosphatase 1 regulatory subunit 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589644.2 False 2019 mRNA 0.48 10 27051258 27055811
XM_021589643.2 True 1973 mRNA 0.48 10 27051258 27055816

Neighbor

gene id symbol gene type direction distance location
LOC110508807 LOC106599567 coding downstream 4777 27033696 ~ 27046481 (-)
tfa LOC100136298 coding downstream 52865 26974438 ~ 26998393 (-)
LOC110508196 LOC100380746 coding downstream 77947 26925269 ~ 26973311 (-)
LOC118944898 NA coding downstream 122851 26928284 ~ 26928407 (-)
LOC118944904 NA coding downstream 123474 26927654 ~ 26927784 (-)
tox LOC106599578 coding upstream 85728 27141544 ~ 27243306 (-)
LOC110508819 LOC106599582 coding upstream 247929 27303745 ~ 27316749 (-)
LOC110508822 LOC106599166 coding upstream 421207 27477023 ~ 27501636 (-)
LOC110508824 LOC106599165 coding upstream 456385 27512201 ~ 27517367 (-)
LOC110508198 LOC106599164 coding upstream 462559 27518375 ~ 27561560 (-)
G2123290 NA non-coding downstream 113789 26936445 ~ 26937469 (-)
G2123281 NA non-coding downstream 129563 26921406 ~ 26921695 (-)
LOC118944878 NA non-coding downstream 134044 26912928 ~ 26920425 (-)
G2123275 NA non-coding downstream 139195 26911759 ~ 26912063 (-)
G2123273 LOC106599558 non-coding downstream 140192 26907953 ~ 26911066 (-)
G2123334 LOC106599575 non-coding upstream 37037 27092853 ~ 27093157 (-)
G2123349 NA non-coding upstream 84126 27139942 ~ 27140186 (-)
G2123449 NA non-coding upstream 159962 27215778 ~ 27216140 (-)
G2123495 NA non-coding upstream 209679 27265495 ~ 27265695 (-)
LOC110508791 LOC106568850 other downstream 982049 25677135 ~ 26069268 (-)
G2122515 NA other downstream 1100805 25946733 ~ 25950453 (-)
G2121457 NA other downstream 1776632 25198248 ~ 25274626 (-)
G2121444 LOC106599515 other downstream 1902738 25144062 ~ 25148520 (-)
G2120836 NA other downstream 2316271 24730674 ~ 24734987 (-)
G2125203 LOC106599130 other upstream 1489125 28544941 ~ 28551514 (-)
G2125253 NA other upstream 1571239 28627055 ~ 28685735 (-)
G2125270 agla other upstream 1606892 28662708 ~ 28663426 (-)
G2125290 NA other upstream 1636323 28692139 ~ 28692470 (-)
G2125723 NA other upstream 1829652 28885468 ~ 28885854 (-)

Expression


Co-expression Network