LOC110508863 (LOC106599199)


Basic Information

Item Value
gene id LOC110508863
gene name LOC106599199
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 28860725 ~ 28862370 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589731.2
ATTATGTCAAGCCCAGATGAAGATGAGGTGCCAGCAATCCAAACAGGCCCCAAGGGTGTGATCAATGACTGGAAGAAGTTCAAGTGTGAGGACCAGGACACCCCTCCCAGCAAGAAGGAGCTCCTCAGACAGATGTCCAACCCCCAGAGCGATGACATCCCAGACAGACTCAACCGCAAGATGAGTATCCAGGAGTTTGAAATGATTGCAGAGGAGGATGAGAAGTGCATGCACTGCTGTCGATTCTTGCGCAGGAAGGAGATGCACAAGCGTCTCAGCTTTGGCCCTAAGTTTGACAGTGTGGTGGAGTTGGACAGCGCCGAGGCCTTCCTGGAGGTCATTGAGAAGGCGCACCGGCTCACCCTGGTGATCGTACTAATCTACGAGGACGGGGTCAAAGGTTGCGAGGCACTCAACTCCTGCCTGGACTGCCTGGCCACAGAGTACACCAGCAGCAAGTTCTGCCACATCCAGGCGACCGCAACAGGTGCCGGCGAGCGCTTCTCAGACAACGTGCTGCCCACCATTCTGGTGTACAAGGCAGGCAAGCTGCTAGGCAACTTCCTGTCCATGACACAGCACCTCAGTGAGGAGTTCTTCGCTACCGATATCGAGGCGTCCCTCAGCGAGTATGGCCTGCTGCCCAAGAAGGAGTTTGCGACCTGTCCTGATGAGGAGGATGCAGGTGTGGAGGTGGAATAAGGGTCTTAATAGGGTGTCAATGACAGTCAGAGCACATTTCTGAATCTATTAGCCTTCTAGGCTGCTGTAAATGCAATATTTTTAGTTAACAGTATCCACTATCCAGTCAAGGCCGTTTAAGTTTATCACAGGCAGCGTACATTCACATCAGCAAAGCTACAGATTTCAGACATCAGCtcaatactgtatgtgtgtatcacTATGAAatgcttttattctctatgtgtGTGAGATTGATAAGTGGATAATATTGCAATCTTTGTTAAAGGTTGTATTGGCGACACAGTATAGGATCCTGCGGTTGGAGTAATGAACCCCCTTTTGGGGGCTTGGGCTTGTTTATCACTATTGACTCAACGTCATTGCATTCTGTGCTATATTTTCATGTTTGAATTCAATAGGTTTAATGTGTTCACCCCCAATCAGTCATTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589731.2 True 1136 mRNA 0.49 3 28860725 28862370

Neighbor

gene id symbol gene type direction distance location
LOC110508860 LOC106599100 coding downstream 20000 28817604 ~ 28840725 (-)
dusp12 dusp12 coding downstream 100545 28757578 ~ 28760180 (-)
LOC110508857 LOC106599111 coding downstream 107042 28706088 ~ 28753683 (-)
LOC110508854 LOC106599121 coding downstream 220801 28632715 ~ 28639924 (-)
plppr5a LOC106599133 coding downstream 353786 28463481 ~ 28506939 (-)
LOC110508862 LOC106599098 coding upstream 31445 28893815 ~ 28901239 (-)
LOC110508212 LOC106599092 coding upstream 120729 28983099 ~ 29003237 (-)
LOC110508867 LOC106599198 coding upstream 163638 29026008 ~ 29028895 (-)
LOC110508868 LOC106599087 coding upstream 183196 29045566 ~ 29073745 (-)
LOC118944842 NA coding upstream 258014 29118684 ~ 29123806 (-)
G2125699 NA non-coding downstream 9375 28851147 ~ 28851350 (-)
G2125698 NA non-coding downstream 9696 28850786 ~ 28851029 (-)
G2125696 NA non-coding downstream 15847 28844639 ~ 28844878 (-)
G2125685 NA non-coding downstream 49452 28810997 ~ 28811273 (-)
G2125684 NA non-coding downstream 50645 28809859 ~ 28810080 (-)
G2125708 NA non-coding upstream 2797 28865167 ~ 28865549 (-)
G2125725 NA non-coding upstream 24967 28887337 ~ 28888071 (-)
G2125667 NA non-coding upstream 39048 28901418 ~ 28902037 (-)
G2125728 NA non-coding upstream 41831 28904201 ~ 28904458 (-)
G2125745 NA non-coding upstream 70289 28932659 ~ 28991064 (-)
G2125290 NA other downstream 168255 28692139 ~ 28692470 (-)
G2125253 NA other downstream 174990 28627055 ~ 28685735 (-)
G2125270 agla other downstream 197299 28662708 ~ 28663426 (-)
G2125203 LOC106599130 other downstream 309211 28544941 ~ 28551514 (-)
G2122515 NA other downstream 2910272 25946733 ~ 25950453 (-)
G2125723 NA other upstream 23098 28885468 ~ 28885854 (-)
G2125813 NA other upstream 215669 29078039 ~ 29078744 (-)
LOC110508917 LOC106598978 other upstream 1538843 30399711 ~ 30401807 (-)
G2127177 NA other upstream 1572065 30434435 ~ 30434854 (-)

Expression


Co-expression Network