LOC110508876


Basic Information

Item Value
gene id LOC110508876
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 29200588 ~ 29203038 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589748.2
ATAGTGGCCACAAACAAAACATCTAATACAATCAACTCAACTGCAGTTAATGTTAATTCCAGTTCCACTCTGGGAAAACGTTTCATTATAATGATATCACTGGCATCTAGGAAAATGACACACTGTGACATTGTTACCTGATTTACTTTCAATTTATATTTTCAAACATTGTTATTGTGGTAGGGAATTCCCTGCTCAGGAAAGTATAAAAACACTGAGAGATGAAGCAAGACACACAAAAGAATTAGGATAAACCAAGGATATACATTGTTACTACCATGATGCCAAACGCCAAGCTTTATTTTGCCACTTGGCTGCTCTTGGTCGCGCTCACTTGTTCTCTCTGGCACGTGAACATGTCCAGCCCAGTGGTGTCGCGCAACCGCCCGATAACTGACAACTGTCTTACTACTGCGCAAACACTACTTTGGAACATCACGGACGCACTTGCACAGGAACACCTGTTCAAAGGAATAAACTGCACGGACCAGGGTATGGAGTTGAACACGAGAACACAGACGGTGCAAGTGTGTGCGCCAAAGACCAAAAGCACTCAACAGCACTCAACATGTTCCAGAGTGACAAATGTAAAGTTTGATCAGGACAAGTGTCTGAGGAACATTGAGGAGGATCTGCGTTGTTATAGTGACATGCTACAAGCTATTGACCCTAAACTGCTTGGACCCAATGTGCTGCAGAGCCTCGGAGAGATTAAGGAGACGTGCTTCCCCTTGTCTTTGTTGGGAGTCTGGTCCTCTCAGCAGGATACACAAGGTTGTAGGCCTACTCAAGGTACTGCTAACCAAAATTCCTTTGATGAAAGGGTACATTTGTGTAAAGTGTTGAAGGGGCTCCAGGTTCGCACCGTAACCATCAACAGAATCATTGGATATATTCATGCTGGAGAACACAATATGTAAGTTGGCATGTCATCATGGACCTGGCAAGCGCCTATGCTGTTGGAGACTATTCCTCATCGCCATCATCGTCGTCATCACCATTCTCCCAAGGGAAAAATAATCAATTCCATGACCATAACAAAGTTGCCTTGTCCTGTGGACAAGTGTTCTTTAATATTATCATCAAATAACAGTCTGATTAAGCTATTGAGGATTTAGAATTTACAGGAGTCAAATATTTATGACTTAATATATaagtatttatttgtttatttttttttacttgaaaaGCTAAATAAtattaaatgtgatatttattaTCAACCTAATGGGTTGTATTATTTATTTGCCTAATTTATgatttaaaaatatttattttatacatatcAATATAACTTATTTCAATGTTTACACAGTTTTTGTTTGAACATctccaaaataaaatgcatttaaGCAATGAATTAAAATAGCCTAATGCCAGctattttatttctctctttgtttTCATGGTATTt

Function

NR:

description
interleukin-12 subunit alpha-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589748.2 True 1414 mRNA 0.38 7 29200588 29203038

Neighbor

gene id symbol gene type direction distance location
LOC110508873 LOC106599192 coding downstream 1407 29194598 ~ 29199181 (-)
LOC110508284 LOC106598767 coding downstream 59575 29138152 ~ 29141013 (-)
LOC118944842 NA coding downstream 76782 29118684 ~ 29123806 (-)
LOC110508868 LOC106599087 coding downstream 126843 29045566 ~ 29073745 (-)
LOC110508867 LOC106599198 coding downstream 171693 29026008 ~ 29028895 (-)
LOC110508874 LOC106599072 coding upstream 526 29203564 ~ 29220510 (-)
LOC110508877 NA coding upstream 25804 29228842 ~ 29239200 (-)
LOC110508879 LOC106599070 coding upstream 61791 29264829 ~ 29269523 (-)
LOC110508881 ap2m1 coding upstream 80878 29283916 ~ 29293425 (-)
LOC110508883 LOC106599063 coding upstream 97612 29300650 ~ 29315173 (-)
G2125860 NA non-coding downstream 41575 29155229 ~ 29159013 (-)
G2125817 NA non-coding downstream 119042 29080571 ~ 29081546 (-)
G2125815 NA non-coding downstream 120330 29079529 ~ 29080258 (-)
G2125814 NA non-coding downstream 121562 29078750 ~ 29079026 (-)
G2125812 NA non-coding downstream 123076 29077146 ~ 29077512 (-)
G2125903 NA non-coding upstream 8908 29211946 ~ 29212438 (-)
G2125888 NA non-coding upstream 94768 29297806 ~ 29298278 (-)
G2125887 NA non-coding upstream 95481 29298519 ~ 29299176 (-)
G2125937 NA non-coding upstream 113116 29316154 ~ 29316379 (-)
LOC110508885 LOC106599059 non-coding upstream 126503 29320737 ~ 29330605 (-)
G2125813 NA other downstream 121844 29078039 ~ 29078744 (-)
G2125723 NA other downstream 314734 28885468 ~ 28885854 (-)
G2125290 NA other downstream 508118 28692139 ~ 28692470 (-)
G2125270 agla other downstream 537162 28662708 ~ 28663426 (-)
LOC110508917 LOC106598978 other upstream 1198175 30399711 ~ 30401807 (-)
G2127177 NA other upstream 1231397 30434435 ~ 30434854 (-)
G2127455 NA other upstream 1350551 30553589 ~ 30555187 (-)
LOC110508928 mrpl34 other upstream 1502047 30705085 ~ 30706591 (-)
G2128216 NA other upstream 2041053 31244091 ~ 31244692 (-)

Expression


Co-expression Network