LOC110508883 (LOC106599063)


Basic Information

Item Value
gene id LOC110508883
gene name LOC106599063
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 29300650 ~ 29315173 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589767.2
TAGAGGGAGCACGTTTATTTTAGGGTTGGTGGTTGTTTGTTGTAGACTGCATTCTGAACTCAGGAGGAAGGATTCTTCGTGTTTATTCAACAAAGTAACTGCCAGCTAGCGTGAACAACGACTGCCTAAATTCACATTTAGTCAAGATTGGAATGTAAATACATTTGGTAGGTTGCGCCCTTTCAAATTGGTAACATAATATCCGGGTACATAATAGTCTTCGTCTGGCTGAACCTTTGTGGAGCAAGGTGCTTCTAAATAGCTAGCTaatactagctaacgttaggttgCTACAGTAGCGAGTTAAAAGGATTCAAAATAACAACTGGTAGCCTGCCGGCTGGCCAGAAAGCCGGGGGAATCACCGCAGCACCGCGGGGAGCCGAGGCCCGAAAGGGAGCCTTCCAGGACCGCGGCTTGATGTACCCTGCCTGCCTCGCCCCAGCAGCCCACAATGGGGGAGACCAAAGTCATATATCACCTCGACGACCAGGAAACACCTTACCTGGTCAAATTGGCAGTGCCCGCGGACAGGGTCACACTTGCAGACTTCAAAAATGTTCTGAAGAAACCGAACTACAAGTTCTTCTTCAAATCTATGGATGACGATTTTGGGGTGGTGAAAGAAGAGATATCTGATGACAATGCCAAACTCCCTTGTTTTAATGGTCGTGTGGTATCTTGGCTGGTGTCAGGGGACGGTGCTCACTCAGACGGGGGCTCGGTGGTTGAGAGTTTGTTGGAGCTGCCGGCCCCCCccctggagaggacagggggCATCGGGGACTCCAGACCACCATCCTACcaTGGGAAGGCCACAGGTGGACGAGACTCGTTGGACAACGAGACTGAGACGGGCTCAATGGTGTCCCagaggagagagcgggagcgacCGCGCCGGAAACCCACTCACCAGCCTGGTGGGAGGAACGGTTACTCGCGAGTGGGCCGAGGGGCTGAGCTGAGCCAATATGACAGCTGCTCGTCCTTCATGAGCAGTGAGCTGGAGTCCACCAGCTGCTTCGACTCTGAGGATGACGACGCCACCAGCCGCTTCAGCAGTTCCACAGAGCAGAGCTCCTCTCGCCTGATGAGGCGACACCGCCGGCGCCGGCGGAAACCCAAAACGTCCAACATGGAAAGGTCTTCATCCTTCAGCAGCATCACAGACTCCACCATGTCTCTGAACATCATCACTGTCACACTGAACATGGAGAAGTATAACTTCCTGGGCATCAGCATAGTGGGGCAAAGCAATGAGAGGGGAGACGGAGGCATCTACATCGGCTCCATCATGAAAGGAGGGGCTGTGGCTGCAGACGGACGCATTGAGCCCGGAGACATGCTGCTGCAGGTGAACGACATCAACTTTGAGAATATGAACAACGACGATGCGGTTCGAGTGCTGAGGGACATCGTACACAAGCCAGGTCCCATCACTCTGACTGTGGCTAAGTGCTGGGACCCCAACCCCCGGAGCTGCTTTGCTCTGCCTAGAAGTGAGCCGATCCGGCCCATTGACCCTGCTGCGTGGGTGTCCCACACTGCAGCGATGACGGGGGTGTACCCTGCCTATGGTATGAGCCCCTCGATGACCACGGTCACCTCCACCAGCTCCTCCATCAGCAGCTCCATCCCTGAGACTGAGCGCTTCGACGATTTCCACTTGTCCATCCACAGCGACATGGCAACCGTTGCCAAAGCCATGGCTTCCCCGGAGTCGGGCCTGGAGGTGCGAGACAGGATGTGGCTAAAGATCACCATCGCCAATGCCTTCATTGGCTCAGATGTCGTGGACTGGCTCTTCCATCACGTGGAGGGCTTCTCGGACCGCAGGGAAGCCAGGAAGTACGCCAGTAACCTGCTCAAGGCCGGCTACATCCGCCACACCGTCAACAAGATCACCTTCTCCGAGCAGTGTTACTACATCTTCGGAGACCTTTGTGGCAaCATGGCCCACTTGTCTCTGCAAGACCATGACGGCTCCAGTGGAGGGGCGTCGGACCAGGACACCCTGCCCCCTCTGCCCCACCCTGGGGCGGCCCCCTGGCCCATGGCCCTGCCCTACCAGTTCCCCATCGCCCACCCCTACAACCCCCAGCCCCAACCCGACCTGCCCCAGGGCTTCCCGGGAGTAGGGGCGGGCAGCGCTGGCAGCCAGCACAGCGACGGCAGCAGCGGCTCCAACTGCAGTAAGACCGAGGGCAGAGGTGGCGCCGGGGGCTCCAACAAGTCGGGTGGTAGTGGCAGCGAGTCAGAGATCAGGAGCCATCGGGCCCCCAGTGAGCGCTCTGTGGCCCCTAGCGAGCGCAGCACCCGCAGTTCCTACAGCCATCGAAGCGCCCAATCACTGTCCTACGGCCCCGGCTTGGTCTATGCCCCCCCAGGCCTACCCCCTCAGCCCCTCCACCTGGCCACAGCTGCCCCTGGAGCACCCCCAGGCCGAGAGCTGGCCAACGCTACCCCAGAGCTCACCGGCTCCCGCCAGTCCCTGCGCATAGCCGTCGGCAACTCTGGCGAGTTCTTTGTTGATGTCATGTGACGCAGGTCATGTCATAGGCACACCACAAAATGGTGGATAGGAATTGTTTTGTTTAGTgctgagagggacagacagagggacagacaggaggaggaggtctcTAGGAAATCgttgttggggtcaattccatttcctTTTTGAATTGGCGGAATTAAAATgtaattgagcccaaccctgctGGAAATGTCCTCTTGCTCTTCTGCTCTACTTTCTTCAGTGAAGAAACCCCCCGTCAGTTTCCTCCCTGTGAGGCGAGTTGTGTTTGGGTCGTGACCGGGAGGGAGGCCGGGGAAACAGCTGAGGATGACTCGGCGCTTTTCTACATGGATGTTTTTAAtttgttgttttctgtctttccTCTCCTTATCTGCACGTCCTCTGTCCCCCCCCAACCCCAGTCCATCAGAGACAAAGGTTAAAAAAagcttcctccctccctacatacTTTCTTTCACCTAAAATGGTCCCTTAACAACCGATTTATGTTTGCAAAGTGAAAGAAATAGAAAATTAACACTAATCTTAAATTGACTTTTATTTGTATGACTTTGTTTGACTATGAAAATGTAGTGCAAGAGACTTGATGCCCTTTCTGTTCTCTTGTGTTTATCATAGCTGGTTGCAGATACATGTAGTTTCTTTTTCAACGCTTAACATGAGCTTCCAGTTTAGACTCATTGTTAAAGTACATTTCTGTTAACCAGAGGTATATTTGTGTCTCTGTCTTGCGATAATGTacagtggagagaaaaaaggTTTTCTTACCAACTCACTACTCTTTTATTgagaaatgtgtttttatttataaATATAGTTTTATGACTTtaa
>XM_036966977.1
gTAGAGGGAGCACGTTTATTTTAGGGTTGGTGGTTGTTTGTTGTAGACTGCATTCTGAACTCAGGAGGAAGGATTCTTCGTGTTTATTCAACAAAGTAACTGCCAGCTAGCGTGAACAACGACTGCCTAAATTCACATTTAGTCAAGATTGGAATGTAAATACATTTGGTAGGTTGCGCCCTTTCAAATTGGTAACATAATATCCGGGTACATAATAGTCTTCGTCTGGCTGAACCTTTGTGGAGCAAGGTGCTTCTAAATAGCTAGCTaatactagctaacgttaggttgCTACAGTAGCGAGTTAAAAGGATTCAAAATAACAACTGGTAGCCTGCCGGCTGGCCAGAAAGCCGGGGGAATCACCGCAGCACCGCGGGGAGCCGAGGCCCGAAAGGGAGCCTTCCAGGACCGCGGCTTGATGTACCCTGCCTGCCTCGCCCCAGCAGCCCACAATGGGGGAGACCAAAGTCATATATCACCTCGACGACCAGGAAACACCTTACCTGGTCAAATTGGCAGTGCCCGCGGACAGGGTCACACTTGCAGACTTCAAAAATGTTCTGAAGAAACCGAACTACAAGTTCTTCTTCAAATCTATGGATGACGATTTTGGGGTGGTGAAAGAAGAGATATCTGATGACAATGCCAAACTCCCTTGTTTTAATGGTCGTGTGGTATCTTGGCTGGTGTCAGGGGACGGTGCTCACTCAGACGGGGGCTCGGTGGTTGAGAGTTTGTTGGAGCTGCCGGCCCCCCccctggagaggacagggggCATCGGGGACTCCAGACCACCATCCTACcagttagttgtTGGGAAGGCCACAGGTGGACGAGACTCGTTGGACAACGAGACTGAGACGGGCTCAATGGTGTCCCagaggagagagcgggagcgacCGCGCCGGAAACCCACTCACCAGCCTGGTGGGAGGAACGGTTACTCGCGAGTGGGCCGAGGGGCTGAGCTGAGCCAATATGACAGCTGCTCGTCCTTCATGAGCAGTGAGCTGGAGTCCACCAGCTGCTTCGACTCTGAGGATGACGACGCCACCAGCCGCTTCAGCAGTTCCACAGAGCAGAGCTCCTCTCGCCTGATGAGGCGACACCGCCGGCGCCGGCGGAAACCCAAAACGTCCAACATGGAAAGGTCTTCATCCTTCAGCAGCATCACAGACTCCACCATGTCTCTGAACATCATCACTGTCACACTGAACATGGAGAAGTATAACTTCCTGGGCATCAGCATAGTGGGGCAAAGCAATGAGAGGGGAGACGGAGGCATCTACATCGGCTCCATCATGAAAGGAGGGGCTGTGGCTGCAGACGGACGCATTGAGCCCGGAGACATGCTGCTGCAGGTGAACGACATCAACTTTGAGAATATGAACAACGACGATGCGGTTCGAGTGCTGAGGGACATCGTACACAAGCCAGGTCCCATCACTCTGACTGTGGCTAAGTGCTGGGACCCCAACCCCCGGAGCTGCTTTGCTCTGCCTAGAAGTGAGCCGATCCGGCCCATTGACCCTGCTGCGTGGGTGTCCCACACTGCAGCGATGACGGGGGTGTACCCTGCCTATGGTATGAGCCCCTCGATGACCACGGTCACCTCCACCAGCTCCTCCATCAGCAGCTCCATCCCTGAGACTGAGCGCTTCGACGATTTCCACTTGTCCATCCACAGCGACATGGCAACCGTTGCCAAAGCCATGGCTTCCCCGGAGTCGGGCCTGGAGGTGCGAGACAGGATGTGGCTAAAGATCACCATCGCCAATGCCTTCATTGGCTCAGATGTCGTGGACTGGCTCTTCCATCACGTGGAGGGCTTCTCGGACCGCAGGGAAGCCAGGAAGTACGCCAGTAACCTGCTCAAGGCCGGCTACATCCGCCACACCGTCAACAAGATCACCTTCTCCGAGCAGTGTTACTACATCTTCGGAGACCTTTGTGGCAaCATGGCCCACTTGTCTCTGCAAGACCATGACGGCTCCAGTGGAGGGGCGTCGGACCAGGACACCCTGCCCCCTCTGCCCCACCCTGGGGCGGCCCCCTGGCCCATGGCCCTGCCCTACCAGTTCCCCATCGCCCACCCCTACAACCCCCAGCCCCAACCCGACCTGCCCCAGGGCTTCCCGGGAGTAGGGGCGGGCAGCGCTGGCAGCCAGCACAGCGACGGCAGCAGCGGCTCCAACTGCAGTAAGACCGAGGGCAGAGGTGGCGCCGGGGGCTCCAACAAGTCGGGTGGTAGTGGCAGCGAGTCAGAGATCAGGAGCCATCGGGCCCCCAGTGAGCGCTCTGTGGCCCCTAGCGAGCGCAGCACCCGCAGTTCCTACAGCCATCGAAGCGCCCAATCACTGTCCTACGGCCCCGGCTTGGTCTATGCCCCCCCAGGCCTACCCCCTCAGCCCCTCCACCTGGCCACAGCTGCCCCTGGAGCACCCCCAGGCCGAGAGCTGGCCAACGCTACCCCAGAGCTCACCGGCTCCCGCCAGTCCCTGCGCATAGCCGTCGGCAACTCTGGCGAGTTCTTTGTTGATGTCATGTGACGCAGGTCATGTCATAGGCACACCACAAAATGGTGGATAGGAATTGTTTTGTTTAGTgctgagagggacagacagagggacagacaggaggaggaggtctcTAGGAAATCgttgttggggtcaattccatttcctTTTTGAATTGGCGGAATTAAAATgtaattgagcccaaccctgctGGAAATGTCCTCTTGCTCTTCTGCTCTACTTTCTTCAGTGAAGAAACCCCCCGTCAGTTTCCTCCCTGTGAGGCGAGTTGTGTTTGGGTCGTGACCGGGAGGGAGGCCGGGGAAACAGCTGAGGATGACTCGGCGCTTTTCTACATGGATGTTTTTAAtttgttgttttctgtctttccTCTCCTTATCTGCACGTCCTCTGTCCCCCCCCAACCCCAGTCCATCAGAGACAAAGGTTAAAAAAagcttcctccctccctacatacTTTCTTTCACCTAAAATGGTCCCTTAACAACCGATTTATGTTTGCAAAGTGAAAGAAATAGAAAATTAACACTAATCTTAAATTGACTTTTATTTGTATGACTTTGTTTGACTATGAAAATGTAGTGCAAGAGACTTGATGCCCTTTCTGTTCTCTTGTGTTTATCATAGCTGGTTGCAGATACATGTAGTTTCTTTTTCAACGCTTAACATGAGCTTCCAGTTTAGACTCATTGTTAAAGTACATTTCTGTTAACCAGAGGTATATTTGTGTCTCTGTCTTGCGATAATGTacagtggagagaaaaaaggTTTTCTTACCAACTCACTACTCTTTTATTgagaaatgtgtttttatttataaATATAGTTTTATGACTTtaa

Function

NR:

description
segment polarity protein dishevelled homolog DVL-3-like

GO: NA

KEGG:

id description
K02353 DVL; segment polarity protein dishevelled

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589767.2 False 3370 mRNA 0.54 15 29300650 29315172
XM_036966977.1 True 3380 mRNA 0.54 15 29300650 29315173

Neighbor

gene id symbol gene type direction distance location
LOC110508881 ap2m1 coding downstream 7225 29283916 ~ 29293425 (-)
LOC110508879 LOC106599070 coding downstream 31127 29264829 ~ 29269523 (-)
LOC110508877 NA coding downstream 61450 29228842 ~ 29239200 (-)
LOC110508874 LOC106599072 coding downstream 80140 29203564 ~ 29220510 (-)
LOC110508876 NA coding downstream 97612 29200588 ~ 29203038 (-)
LOC110508885 LOC106599059 coding upstream 5564 29320737 ~ 29330605 (-)
copb2 LOC106599054 coding upstream 15928 29331101 ~ 29346369 (-)
LOC110508887 LOC106599048 coding upstream 40478 29355651 ~ 29360875 (-)
LOC118944841 LOC106568934 coding upstream 56643 29370881 ~ 29378439 (-)
nmnat3 nmnat3 coding upstream 69699 29384872 ~ 29393924 (-)
G2125887 NA non-coding downstream 1474 29298519 ~ 29299176 (-)
G2125888 NA non-coding downstream 2372 29297806 ~ 29298278 (-)
G2125875 NA non-coding downstream 26170 29176653 ~ 29274480 (-)
G2125903 NA non-coding downstream 88212 29211946 ~ 29212438 (-)
G2125860 NA non-coding downstream 141637 29155229 ~ 29159013 (-)
G2125937 NA non-coding upstream 981 29316154 ~ 29316379 (-)
G2125943 NA non-coding upstream 34848 29350021 ~ 29350402 (-)
G2125945 LOC106568934 non-coding upstream 40891 29356064 ~ 29378426 (-)
LOC118944842 NA other downstream 176908 29118684 ~ 29123806 (-)
G2125813 NA other downstream 221906 29078039 ~ 29078744 (-)
G2125723 NA other downstream 414796 28885468 ~ 28885854 (-)
G2125290 NA other downstream 608180 28692139 ~ 28692470 (-)
G2125270 agla other downstream 637224 28662708 ~ 28663426 (-)
LOC110508917 LOC106598978 other upstream 1086040 30399711 ~ 30401807 (-)
G2127177 NA other upstream 1119262 30434435 ~ 30434854 (-)
G2127455 NA other upstream 1238416 30553589 ~ 30555187 (-)
LOC110508928 mrpl34 other upstream 1389912 30705085 ~ 30706591 (-)
G2128216 NA other upstream 1928918 31244091 ~ 31244692 (-)

Expression


Co-expression Network