slc25a36a (LOC106568938)


Basic Information

Item Value
gene id slc25a36a
gene name LOC106568938
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 29821881 ~ 29872184 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589785.2
gtacatactgtgaCCTATCCTCCCTCATTGCAGCGATGAACCGATAAGAGATGCGAGCGAGGGTGACTGTAGCAAATACCGATGGATAGAACTGAGAATACACAGAACATGTTAATTTAGAATTCCTCATGTTTTGTAGTTTAACGTACATAGGAATTAAAATAAAACCTGTCCGTTCAAAGAGGGGATTGTACGAAACAGAAGGGTTTGTGTGACGTTAGATGACTAGCTAACGTTGGGCAACTGCAATCAAATCAGTTTTACTGATTTTATAACCGACGTCGCCGATATTACGAAGTGCGCGTATCGTCATCCAACCCGGTCTTCCTCATTGACGCAGTCCGAAGAGTGTACTGGTTCGGAGAATGCTAAAGAATGAGTCAAAGGGATACCCTGGTTCATTTGTTTGCCGGAGGGTGTGGGGGAACAGTGGGTGCTATTCTGACTTGTCCACTGGAAGTGGTAAAGACCAGACTACAGTCCTCTCATGTCACCTTCTACATCTCTGAGGTGCAGCTCAGCACCGTCAACGGGGCCAGTGTGGCCCGCATGGCCCCCCCGGGACCCCTCCACTGCCTCAAGTTGATACTGGAGAAGGAGGGACCGCGCTCGCTGTTCAGAGGCCTTGGGCCCAACCTGGTGGGTGTGGCTCCTTCCAGAGCCATCTACTTTGCATCCTACTCCACTGCCAAAGAGAAGCTGAACGGCGTGTTTGAGCCCGACTCTACGCAGGTCCATATGGTGTCTGCAGGCCTAGCAGGGTTCACTGCTATCACGGCGACCAATCCCATCTGGTTGATCAAGACCCGGTTGCAGCTGGATGCCAGGAACCGTGGCGAGAGGCGCATGAATGCGTTTGAGTGTGTGCGGCGGGTCTACCAGGCGGAGGGCTGGCGGGGCTTCTATCGGGGCATGTCTGCCTCGTATGCCGGCATCTCCGAGACGGTCATCCATTTTGTCATCTATGAGAGCATCAAGCGCAAGCTGATGGAGTCCAGGGCCCAGGCCAGCATGGATCAGGACGAGGACGAGTCGGTGAGGGATGCCTCAGACTTTGTGGGCATGATGCTGGCCGCCGCCACCTCCAAGACCTGTGCCACCTCTCTCGCCTACCCCCACGAGGTGATCCGCACCCGGCTACGAGAGGAGGGCAGCAAGTACCGCTCCTTCTTCCAGACATTACTGACAGTACCTAAGGAGGAGGGCTACCGCGCCCTGTACCGTGGTCTCACCACCCATCTGGTCCGCCAGATCCCCAACACCGCCATCATGATGTCCACCTACGAGATGGTGGTCTACATGCTACAACGCTAGCCCCTCCCCTTCCTGTCTGGAGAGAAAGTAGGAAGTGACTGACTTGGTTGGGCATATCTAAGATGGAGACCAAAGGAAAACTGA
>XM_021589786.2
CCTGAACCGGATTTCTTTATCCAGTACTCTTCAGGAGAACGACAGAGTGCTGGACATGGACAAGGTGAATTGTCGCTCcctgtttttacatttttattttatttaactcggcaagtcagttaaaaacaaattattatttacaatgacggcctacactggccaaaccctaacgacgctgggccaattgtgcaccgccctaatGTCGAGAACAGTTCACCTTGAAACCAGACCAATTCCCGAGAGGAATGGAAGCGCAAAGACGTATTGCAGAAGTGTACGGTCGCCAATCAAGATTAGAAAGAAAGTCAACAAAGGGGATATCGCTCCCGTTGAGACCACCAAGGATCCTGCTGATGTTGACTATAATAGTGTGGGGGAACAGTGGGTGCTATTCTGACTTGTCCACTGGAAGTGGTAAAGACCAGACTACAGTCCTCTCATGTCACCTTCTACATCTCTGAGGTGCAGCTCAGCACCGTCAACGGGGCCAGTGTGGCCCGCATGGCCCCCCCGGGACCCCTCCACTGCCTCAAGTTGATACTGGAGAAGGAGGGACCGCGCTCGCTGTTCAGAGGCCTTGGGCCCAACCTGGTGGGTGTGGCTCCTTCCAGAGCCATCTACTTTGCATCCTACTCCACTGCCAAAGAGAAGCTGAACGGCGTGTTTGAGCCCGACTCTACGCAGGTCCATATGGTGTCTGCAGGCCTAGCAGGGTTCACTGCTATCACGGCGACCAATCCCATCTGGTTGATCAAGACCCGGTTGCAGCTGGATGCCAGGAACCGTGGCGAGAGGCGCATGAATGCGTTTGAGTGTGTGCGGCGGGTCTACCAGGCGGAGGGCTGGCGGGGCTTCTATCGGGGCATGTCTGCCTCGTATGCCGGCATCTCCGAGACGGTCATCCATTTTGTCATCTATGAGAGCATCAAGCGCAAGCTGATGGAGTCCAGGGCCCAGGCCAGCATGGATCAGGACGAGGACGAGTCGGTGAGGGATGCCTCAGACTTTGTGGGCATGATGCTGGCCGCCGCCACCTCCAAGACCTGTGCCACCTCTCTCGCCTACCCCCACGAGGTGATCCGCACCCGGCTACGAGAGGAGGGCAGCAAGTACCGCTCCTTCTTCCAGACATTACTGACAGTACCTAAGGAGGAGGGCTACCGCGCCCTGTACCGTGGTCTCACCACCCATCTGGTCCGCCAGATCCCCAACACCGCCATCATGATGTCCACCTACGAGATGGTGGTCTACATGCTACAACGCTAGCCCCTCCCCTTCCTGTCTGGAGAGAAAGTAGGAAGTGACTGACTTGGTTGGGCATATCTAAGATGGAGACCAAAGGAAAACTGA
>XM_036966820.1
GCTTCATTCACCCTGAACCGGATTTCTTTATCCAGTACTCTTCAGGAGAACGACAGAGTGCTGGACATGGACAAGGTGAATTGTCGCTCcctgtttttacatttttattttatttaactcggcaagtcagttaaaaacaaattattatttacaatgacggcctacactggccaaaccctaacgacgctgggccaattgtgcaccgccctaatGTCGAGAACAGTTCACCTTGAAACCAGACCAATTCCCGAGAGGAATGGAAGCGCAAAGACGTATTGCAGAAGTGTACGGTCGCCAATCAAGATTGTGTGGGGGAACAGTGGGTGCTATTCTGACTTGTCCACTGGAAGTGGTAAAGACCAGACTACAGTCCTCTCATGTCACCTTCTACATCTCTGAGGTGCAGCTCAGCACCGTCAACGGGGCCAGTGTGGCCCGCATGGCCCCCCCGGGACCCCTCCACTGCCTCAAGTTGATACTGGAGAAGGAGGGACCGCGCTCGCTGTTCAGAGGCCTTGGGCCCAACCTGGTGGGTGTGGCTCCTTCCAGAGCCATCTACTTTGCATCCTACTCCACTGCCAAAGAGAAGCTGAACGGCGTGTTTGAGCCCGACTCTACGCAGGTCCATATGGTGTCTGCAGGCCTAGCAGGGTTCACTGCTATCACGGCGACCAATCCCATCTGGTTGATCAAGACCCGGTTGCAGCTGGATGCCAGGAACCGTGGCGAGAGGCGCATGAATGCGTTTGAGTGTGTGCGGCGGGTCTACCAGGCGGAGGGCTGGCGGGGCTTCTATCGGGGCATGTCTGCCTCGTATGCCGGCATCTCCGAGACGGTCATCCATTTTGTCATCTATGAGAGCATCAAGCGCAAGCTGATGGAGTCCAGGGCCCAGGCCAGCATGGATCAGGACGAGGACGAGTCGGTGAGGGATGCCTCAGACTTTGTGGGCATGATGCTGGCCGCCGCCACCTCCAAGACCTGTGCCACCTCTCTCGCCTACCCCCACGAGGTGATCCGCACCCGGCTACGAGAGGAGGGCAGCAAGTACCGCTCCTTCTTCCAGACATTACTGACAGTACCTAAGGAGGAGGGCTACCGCGCCCTGTACCGTGGTCTCACCACCCATCTGGTCCGCCAGATCCCCAACACCGCCATCATGATGTCCACCTACGAGATGGTGGTCTACATGCTACAACGCTAGCCCCTCCCCTTCCTGTCTGGAGAGAAAGTAGGAAGTGACTGACTTGGTTGGGCATATCTAAGATGGAGACCAAAGGAAAACTGA

Function

NR:

description
solute carrier family 25 member 36-A

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15116 SLC25A33_36, RIM2; solute carrier family 25, member 33/36

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589785.2 False 1398 mRNA 0.54 7 29821881 29854838
XM_021589786.2 False 1350 mRNA 0.55 8 29821881 29872173
XM_036966820.1 True 1288 mRNA 0.55 7 29821881 29872184

Neighbor

gene id symbol gene type direction distance location
LOC110508890 LOC105021148 coding downstream 15147 29682605 ~ 29806734 (-)
nmnat3 nmnat3 coding downstream 427957 29384872 ~ 29393924 (-)
LOC118944841 LOC106568934 coding downstream 443442 29370881 ~ 29378439 (-)
LOC110508887 LOC106599048 coding downstream 461006 29355651 ~ 29360875 (-)
copb2 LOC106599054 coding downstream 475512 29331101 ~ 29346369 (-)
LOC110508894 LOC106599038 coding upstream 4565 29876749 ~ 29883535 (-)
LOC110508897 LOC106599029 coding upstream 56818 29929002 ~ 29960541 (-)
LOC110508900 LOC106599024 coding upstream 95381 29967565 ~ 29977338 (-)
LOC110508901 LOC106599023 coding upstream 108919 29981103 ~ 29984528 (-)
LOC110508903 LOC106599022 coding upstream 119409 29991593 ~ 29998944 (-)
G2126846 NA non-coding downstream 121011 29700531 ~ 29700870 (-)
G2126817 NA non-coding downstream 160155 29658952 ~ 29661726 (-)
G2126784 NA non-coding downstream 194177 29624558 ~ 29627704 (-)
G2126781 NA non-coding downstream 208796 29612441 ~ 29613085 (-)
G2126935 NA non-coding upstream 27944 29900128 ~ 29900394 (-)
G2126937 NA non-coding upstream 31337 29903521 ~ 29903841 (-)
G2126894 NA non-coding upstream 105605 29977789 ~ 29979415 (-)
G2126961 NA non-coding upstream 113709 29985893 ~ 29986103 (-)
G2126963 LOC106572245 non-coding upstream 115152 29987336 ~ 29987603 (-)
LOC118944842 NA other downstream 698139 29118684 ~ 29123806 (-)
G2125813 NA other downstream 743137 29078039 ~ 29078744 (-)
G2125723 NA other downstream 936027 28885468 ~ 28885854 (-)
G2125290 NA other downstream 1129411 28692139 ~ 28692470 (-)
G2125270 agla other downstream 1158455 28662708 ~ 28663426 (-)
LOC110508917 LOC106598978 other upstream 529029 30399711 ~ 30401807 (-)
G2127177 NA other upstream 562251 30434435 ~ 30434854 (-)
G2127455 NA other upstream 681405 30553589 ~ 30555187 (-)
LOC110508928 mrpl34 other upstream 832901 30705085 ~ 30706591 (-)
G2128216 NA other upstream 1371907 31244091 ~ 31244692 (-)

Expression


Co-expression Network