LOC110508895 (LOC106599036)


Basic Information

Item Value
gene id LOC110508895
gene name LOC106599036
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 29888003 ~ 29893380 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966869.1
gaatgggaGTCAATTGGGCGCTAACTCAAAAACCCAACATTAGCATAAATTTCGTCAACAAGAAGtacaacattacaaatattttcCGTGATGTGATATGATTAACTTGCTATCTGTAATATTGTACAGCTTTTGAATCGTGACATTACGTACTTTCGAGGAAAACAGGCACGTTTCCTGATTCATACCCTGACTTTAAAAAGGGATTGCGTGACGATTAGTTTTAGCAACCGCGTGACGCAGCATAACAACCTGAGCGCGATTGGTCGACAGTCTGCGGGGTGGGGCGTTAGACGTTCCTCCATTCATTGCCCCATGCATTCAAGATCAAGATGGCAGCCTCCGTGTGTCGGTGCTATGAGCTGGTCGGAAGACGTCTTCTACTCCTGCCATCCCGTGCTGTCGTCTCCTCATTCAGTAGAGGAGATGCTTACAGGATATGTTGGTCTCCGGCTGTCCCTGTGCAGGTGCGGTATGCGTCAGAACGACCTAGTCGTAAAGGCTTCTTTGGGGAGTTTGTGGAGAACCTGAGGCAGGAGTTTGGGAAGGACAAGGAGATGAAGGAGAATATCAAGAAGTTTAGAGAGGAGGCCAAGAGGCTGGAGGAGTCGGATGCCCTGCAACAGGCTCGGAGGAAATTTaaaacaattgaatcagAGACGGTAAAGACCTCTGAGGTGTTCAAGAAGACCCTGGGGACTCTGTCTGAGACTGTGAAGGAGggCTTTGAGGAAGTGACCCGTACAGACCTGGGGAAGAAGAtcaaggagggggtggaggaggcaGCCAAGACGGCCAGGCACTCTGCTGAGTCTGTGTCCAAGGGAGGAGAGAAGCTGGGAGCGACCAGCGCCTTCAGGGCCATCTCACAGGGGATGGAGTCAGTGAAGAGAGAGATTGATGTGGTAGACGATGGTACCTATAGGGCTCCTTCTCAACTCAGGAAAAGAAGTGAATTCTCCTTCAagggaggggagagtgagaaCCGTGTCTTTGAGGCCAATGAAGAGGACATGGGTGTTGTTCTGCACAAGGATTCTAAGTGGTACGCACAGTGGAAGGACTTCAAGGACAACAATATGGTTTTCAACAGGTTCtttgaaatgaaaatgaaatatgATGAGAGTGACAACGCCCTTGTCAGAGCATCTCGAGCCGTGACCGACAGAGTCACTGATCTACTAGGTGGTCTCTTCTCGAAGACTGAGATGTCTCAGGTGCTGACCGAGATCTTAAAGGCAGACCCCAGCTTTGACAAGGACTCCTTTCTCAAACAGTGTGAGAAGGACATCATCCCCAACATCCTAGAGGCTATGATCCGTGGAGAGCTGGAGGTCCTGAAGGACTGGTGTTATGAAGCTacaTACAGCCAGCTGGCCCACCCTATCCAACAGGCCAGGGCCCTGGGTCTAATGTTCCAGTCCAAGGTCCTAGATATAGACAACATAGATttGGCGATGGGGAAGCTCATGGATCAAGGCCCTGTGCTGATCATCACGTTCCAGGCCCAGGTGGTCATGGTGATTCGTAGTCCCAAGGGAGACCTGGTGGAAGGGGATCCAGAGAAGGTGTTGAGGATGATGTACGTGTGGGCTCTGTGTCGGGACCAGGAAGAGCTCAACCCCAACGCAGCCTGGAGACTACTGGACATCTCTGCCTCCAGCACTGAGCAGGCTCTCTGAGAGAccagggaaggagaagagacagagggacactcttaggacaca

Function

NR:

description
mitochondrial import inner membrane translocase subunit TIM44-like

GO: NA

KEGG:

id description
K17804 TIM44; mitochondrial import inner membrane translocase subunit TIM44

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966869.1 True 1727 mRNA 0.51 13 29888003 29893380

Neighbor

gene id symbol gene type direction distance location
LOC110508893 marh2 coding upstream 10684 29873489 ~ 29877319 (+)
LOC110508889 LOC106599045 coding upstream 226249 29410322 ~ 29661754 (+)
LOC110508882 LOC106599064 coding upstream 604849 29276406 ~ 29283154 (+)
LOC110508880 NA coding upstream 613549 29270737 ~ 29274454 (+)
LOC110508878 LOC106599189 coding upstream 632047 29246463 ~ 29255956 (+)
LOC110508896 NA coding downstream 10960 29904340 ~ 29906026 (+)
LOC118944851 NA coding downstream 21450 29914830 ~ 29921206 (+)
LOC110508899 LOC100136537 coding downstream 30846 29924226 ~ 29927553 (+)
LOC110508902 LOC106599020 coding downstream 95260 29988640 ~ 29991589 (+)
LOC110508214 LOC106569003 coding downstream 370770 30264150 ~ 30265990 (+)
G2126297 NA non-coding upstream 1639 29886065 ~ 29886364 (+)
G2126288 NA non-coding upstream 21683 29866105 ~ 29866320 (+)
G2126287 NA non-coding upstream 22575 29865087 ~ 29865428 (+)
G2126269 NA non-coding upstream 51719 29834989 ~ 29836284 (+)
G2126266 NA non-coding upstream 65845 29817636 ~ 29822158 (+)
G2126300 NA non-coding downstream 6697 29900077 ~ 29900320 (+)
G2126339 NA non-coding downstream 61871 29955251 ~ 29956186 (+)
G2126322 NA non-coding downstream 84514 29977894 ~ 29979426 (+)
G2126323 LOC106599023 non-coding downstream 87652 29981032 ~ 29982292 (+)
G2126320 NA non-coding downstream 91379 29984759 ~ 29985703 (+)
G2125614 LOC106599059 other upstream 564619 29320743 ~ 29323384 (+)
LOC110508851 LOC106599130 other upstream 1349591 28522217 ~ 28551515 (+)
LOC110508827 LOC106599210 other upstream 2164015 27720549 ~ 27725061 (+)
G2123170 NA other upstream 2778721 27106034 ~ 27109282 (+)
G2126497 NA other downstream 316867 30210247 ~ 30211633 (+)
kcnn1a LOC106598974 other downstream 641471 30534338 ~ 30592397 (+)
G2127299 LOC106598972 other downstream 747307 30640687 ~ 30641243 (+)
LOC110508221 LOC106598877 other downstream 1746922 31594783 ~ 31643462 (+)
G2128189 NA other downstream 1845932 31739312 ~ 31740070 (+)

Expression


Co-expression Network