LOC110508937


Basic Information

Item Value
gene id LOC110508937
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 30978719 ~ 30980452 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589860.2
ATTGGTTCCCCCAGCGCATGGAGATGGTTGGAGGGCTGCCATCTAGTGAACGAAAAGAAACATTCTTCCGGCGAActttctagctagctatttcctGCGTGTGACGTAACACGTCCTCCAAATCAAAGCTGGTGTTCTAACGTTAGGTCGTGTCTTCTGCCGGTGTTGTCCTTGCCAATTTTAGGACTAAAATCATGGTTTTCGAAAACAAAATGATAATGAATGGGGAGCCTGATGATGAGGAGGAAGAGGCACCggcagaggaggaaggagatgaggaagaggaggaagaagacatGGTGGATCCCTTAGAAACAATACGGGCAAAGTGTGAGGCGTCAGAGCACTGCACCCACACAAGGGAGAGGCTGGAGGCCTGCACGGCCCGAGTGGGCTCAAGATCACACACACAGGAGGAATGCACAGAGGAACTCTTCGACTTCCTACATGCACGGGACCACTGTGTAGCGCACAAGCTCTTCCACAACGTCAAATGAACTTCTCCATTCTTCGTCAATTCCAGTAGTTTATTGCAGCTGTGGAATCTGTTATAAATACTACAGATGTGCAGTGTCAGGGAAAGCTTGAGACCAGAGCCTGTGTTCTACCCATGAATGTTAATAAATTAGATCTTGTTAGTTTTTTTTCTGGACAAAATACAGTTCTGTATACACCAGCAGCCTGAGCCATTACACATATGTACATTTTAGACTGTATATGGCCAACCTGCTGCTTGTATTGGTGATAGATGCAAACTTCTCAGATCTTTGTGGCCAGTAAATGAAGACTGGCCAGGAGTTTTACTGCATTAAAATGTCAAGCACTG
>XM_036966461.1
ACGTTAGGTCGTGTCTTCTGCCGGTGTTGTCCTTGCCAATTTTAGGACTAAAATCATGGTTTTCGAAAACAAAATGATAATGAATGGGGAGCCTGATGATGAGGAGGAAGAGGCACCggcagaggaggaaggagatgaggaagaggaggaagaagacatGGTGAAACAATACGGGCAAAGTGTGAGGCGTCAGAGCACTGCACCCACACAAGGGAGAGGCTGGAGGCCTGCACGGCCCGAGTGGGCTCAAGATCACACACACAGGAGGAATGCACAGAGGAACTCTTCGACTTCCTACATGCACGGGACCACTGTGTAGCGCACAAGCTCTTCCACAACGTCAAATGAACTTCTCCATTCTTCGTCAATTCCAGTAGTTTATTGCAGCTGTGGAATCTGTTATAAATACTACA

Function

NR:

description
cytochrome b-c1 complex subunit 6, mitochondrial-like

GO: NA

KEGG:

id description
K00416 QCR6, UQCRH; ubiquinol-cytochrome c reductase subunit 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589860.2 False 826 mRNA 0.46 4 30978719 30980452
XM_036966461.1 True 413 mRNA 0.49 4 30978983 30980313

Neighbor

gene id symbol gene type direction distance location
ptger4c LOC106599187 coding downstream 70744 30905879 ~ 30907975 (-)
LOC110508928 mrpl34 coding downstream 272128 30705085 ~ 30706591 (-)
LOC110508927 LOC106598960 coding downstream 273942 30700542 ~ 30704777 (-)
LOC110508217 LOC106598972 coding downstream 328884 30629942 ~ 30649835 (-)
LOC110508919 NA coding downstream 531271 30442013 ~ 30447448 (-)
LOC110508938 LOC106598935 coding upstream 14643 30995095 ~ 31004289 (-)
LOC110508940 gbg12 coding upstream 103863 31084315 ~ 31136167 (-)
LOC110508941 gp177 coding upstream 157634 31138086 ~ 31169294 (-)
LOC110508942 LOC106598932 coding upstream 193475 31173927 ~ 31214079 (-)
LOC118944807 LOC106598929 coding upstream 273481 31253933 ~ 31254937 (-)
G2127637 NA non-coding downstream 47253 30924247 ~ 30931466 (-)
G2127615 NA non-coding downstream 93934 30884465 ~ 30884785 (-)
G2127614 NA non-coding downstream 95308 30883183 ~ 30883411 (-)
G2127609 NA non-coding downstream 103708 30874419 ~ 30875011 (-)
G2127584 NA non-coding downstream 163985 30814233 ~ 30814734 (-)
G2127673 NA non-coding upstream 4621 30985073 ~ 30986114 (-)
G2127817 gbg12 non-coding upstream 14706 30995158 ~ 31136091 (-)
G2128197 NA non-coding upstream 238610 31219062 ~ 31219909 (-)
G2128215 LOC100380853 non-coding upstream 261715 31242167 ~ 31242441 (-)
G2128200 NA non-coding upstream 264670 31245122 ~ 31283855 (-)
G2127455 NA other downstream 423532 30553589 ~ 30555187 (-)
G2127177 NA other downstream 543865 30434435 ~ 30434854 (-)
LOC110508917 LOC106598978 other downstream 576912 30399711 ~ 30401807 (-)
LOC118944842 NA other downstream 1854977 29118684 ~ 29123806 (-)
G2128216 NA other upstream 263639 31244091 ~ 31244692 (-)
G2128242 LOC106584167 other upstream 338831 31319283 ~ 31323364 (-)
LOC110508968 LOC106598866 other upstream 731156 31708667 ~ 31761665 (-)
G2128568 NA other upstream 902263 31882715 ~ 31883140 (-)
LOC110508982 NA other upstream 1042606 32023057 ~ 32029225 (-)

Expression


Co-expression Network