LOC110508940 (gbg12)


Basic Information

Item Value
gene id LOC110508940
gene name gbg12
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 31084315 ~ 31136167 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589863.2
ACAAATTCTCAAAACACCCGCTAGTGTTCCCACTGTTCTGTGACTTCACTTCTCTATCCGGCTGCGATCGTTAGTTTTCGTCACGAAGCGGACGAGGGAGTGTAGCCTAGTCATACGGGCAAGTAGGTGGAGAAAATAAAATAATCAACGATATTTACGATAAGCGACAGCCAACACCGTGAGAAAGTGAAAGTGGCACCAGTTGGCAGTCCCAAAGACCGTCGGTTGATCTGCTTTTCATAGCTTTCAACTGTTATTGAGTGAGGTCTCCTCCTAGTTGGTGACGGATACAGTAGGCGACACGGGGAGACCAGCTTGTATTGCCCTCGCCAGATTTCATAAGATTAGATTTCAAAATATTTGACGAGTGGTGTGGAGGCCAAGATGTCATCGAAGATGCCAAGCTCTAACAACATAACTCAGGCCAGAAGGACAGTACAACAGCTAAAGATAGAGGCCAGTATTGAGAGGATAAAGGTATCCAAGGCCTCAGCGGACCTCATGCACTACTGTGGCGAACATGCCAAGTACGACCCTCTGCTCATGGGCATCCCTGCCTCAGAGAACCCCTTCAAGGACAAAAAGCCTTGCGCTATATTGTAATGACCCCTTTATGTATCTGTTGGCTTTTTAATATTCCTGTATGTCTTTTTTTTCTACTCATCCACCCGTCATGCCTTAAAGCCTATAACCTTACCCTTTAATGAAAATGTTGTATTTTATCACTCACGTTGAACATATTTACAGACATAACATACAATGCATTGATACAGTACATCGGTCAAATATACCTTGGGACACTGACTGTTAATGTGTGTCTGATTTAGCTCAGTGGATTTAGCCGATGTTTCCGACCATCCCTTTAACGAGTCTGTTTTAATCGTATCTTCTGTCATTTGTATTATAATGACCTAATTTAATATATTTCAGGCTTTCGAGTCATGGTTGGGacatgtggctgtattgtcttctTCCCATTGACTCATCATTGACCCGTGCAGCGTTCACGTGCTAGTTGGAACTAGAAAACTCAGACATGTttgacttgctaactggttgaacaGGGCAtgtgtataactacaaccagttagcaaaTCAAACATGTCAGAGTaacctagttccgactagcatgtGAACGCAGCTTCATGCTGTTTATTAATAACTTACTGGTTCAGCAGGATGGCATCTGGACTGTCAGTGAGCAATGAAGGAAGTAGACCCAGGGACAAATATTTTCTAAAATAGACATCATCAGAGCCCTCAACCTTCCATTAATGTAAAGAGTATAAGTTTTTGATTAGTGCTGAGGATATTTTAACTCACTGCCAATTTTCGGATGGGAAACTGCAGTGTACAGCTAAGACAGGTAATTCACAACCTCAGTATACAGCACTCCACCCAGCCATTTAACCCAGGTGTTACATAACAGAACACTGTGAGCCAAGTCACCTTAACATATTTACGATAGTGATCATGTAATCAATGTATAGGTTGGTATTTTAAAGAGGGGGTTCAGGTACAAGTATTCTGTTGGGAGAGACCATAGGAGGTGCACCAGCTTGGCACATGGGTTGTTATTAATGGTGTAATAAATTATTTTCACTCCCAACTATGTGCACTATACCCTGTATTTGAGTAGACTGGTCTGATAGACTAgaagtaacatagtaaacgtacaTCCGAGACACtcaaattacactgaacaaaaatataaatgcaacatgtgaagggctggtcccatgtttcatgagccggAAAAAAAATCCCAGAGATATTTCCCTACGCCCAAAAAATGAATTTCTCTTAAATTACGTGCAAAAAATTGTTTACAcccttgttagtgagcatgtatcctttgtcaagataatcaatctacttgacaggtgtggcatttcaagaagctcattaaactgcatgatcattacacaggtgcaccttgtgctggggacaatcaaaggccactctaaaatgtgcagtttggtcacGCAACGCAATGGCACaattctcaagttttgagggagcgtgcaattgacatgctgactgcaggaatgtccaccagagctgttacctaccataagccacctcccacatccttttagagaatttggcagtacgtccaaccggtctcacaaccggagaccacttgtaaccacaccagcccaggacctccacatctggtttcttcatctgcgggattggctgggcctggctccccagtgggtcgGCCTGACTTcgaagtgggtgggcctatgccctctcaGGCCCACCCATTGCCTCGCCCttgcccagtcatatgaaatccatagattatggcttAATGAATGTATTCATATTGACTGATTTAtttgtatgaactgtaactcaacaaaatcttagaaatggttgcatgttgcatttatattttatttcattatAGTATATGACATGTTAcctttggtatggttacataagatagAAAGTTagttaaggcaaaaacaaaaggaggttggttggttgggatgggatgggcgtATAATGCGAATGTCTAGCAGCACAAAGGTTGCATgcttgaatctcatcacggacaaattAAGCATTTTAGCAACTtggcaactacttactacttttttttAAGCTATTttacaactacttagcatgttaaccctaacccttttagctggCCCttcccccaaccttaacccttttagcccAACTCCTAACCAGAACCCCTAAGCCCtagagctaacgttagccagctagctaatgttagccacctaacCAACGTtaaccacaacaaattggaattcgtaacatatcatcaAAAAActgatgatggacatccacaaattaacacatatcatacgaaacgtaacatatcatacgaaatggagtGTCTCAATTTACAAACAGAATAATactaaatgctctgagaccacgtTGATTTGAAGCTGACCCCAATGTCCTGTGATAGTACTAAGTATGGTATTTGGGGGggcaggaccaagtttgggaaactctGTCCTATTGAACAGTAAAAAATAGAATGTCCCGTATGCCCTGTCGGTTAGCTGTTGGGAGCATGTCTCGATAAAACGAACCAGCTGTATCGATGTGGTTAGCACAGATAGGCTGGAAAGTATAATTATGTTTGCATTCACAAAGCCTTACAAGTGTTTGCATTGTGGTgtgaagattattatttttttatttgttaaatgaAATGGATCTTTCTGTGCTGATTTCCTGTGATTTCTAACTGAATTGTGCCATCGTCTTGTCACTAGCAGAAGAGAAAAGAACATGTCTGATTGTATACACCTGGTGCTACTGTTTGTAATGTTTGTGTTATCCTCCCTCCAAAAGGTACTTCATTCATCATAAAGGTCTTGAAATCAGAGACAGGGAGACCCAGTAACCCATTATGAATTATTGAGCGATGACAATTGTATCTCGACGACTTTTCTCTCTGACAAGTGTATCTCTCTAATATGCTAAATCTGGCTACTGTTACTTTGTGTGACATCACCAGACAATTCTGATTCAACCAGCATACCAGCAATGGCCTTTATATACCTTTGTGAGACTCGTACGTGACCTTTCCCTGACCCTCTGTGAAGACAGTGTGAACCTGGTGGATTAAAGACATCTGTATGTGGTTTTGTTCATTATATCAAGTGATGGagcctttgtttctctctctgctgagtACAGTCTTTCCTGTTGTTATTAAACATAGATTTATAATTGCA

Function

NR:

description
guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like isoform X1

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005834 heterotrimeric G-protein complex cellular_component
GO:0004871 obsolete signal transducer activity molecular_function

KEGG:

id description
K04347 GNG12; guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589863.2 True 3728 mRNA 0.41 4 31084315 31136167

Neighbor

gene id symbol gene type direction distance location
LOC110508938 LOC106598935 coding downstream 80026 30995095 ~ 31004289 (-)
LOC110508937 NA coding downstream 103863 30978719 ~ 30980452 (-)
ptger4c LOC106599187 coding downstream 176340 30905879 ~ 30907975 (-)
LOC110508928 mrpl34 coding downstream 377724 30705085 ~ 30706591 (-)
LOC110508927 LOC106598960 coding downstream 379538 30700542 ~ 30704777 (-)
LOC110508941 gp177 coding upstream 1919 31138086 ~ 31169294 (-)
LOC110508942 LOC106598932 coding upstream 37760 31173927 ~ 31214079 (-)
LOC118944807 LOC106598929 coding upstream 117766 31253933 ~ 31254937 (-)
LOC110508943 LOC106598918 coding upstream 122902 31259069 ~ 31280002 (-)
LOC110508945 LOC106598921 coding upstream 148979 31246275 ~ 31305211 (-)
G2127673 NA non-coding downstream 98201 30985073 ~ 30986114 (-)
G2127637 NA non-coding downstream 152849 30924247 ~ 30931466 (-)
G2127615 NA non-coding downstream 199530 30884465 ~ 30884785 (-)
G2127614 NA non-coding downstream 200904 30883183 ~ 30883411 (-)
G2127609 NA non-coding downstream 209304 30874419 ~ 30875011 (-)
G2128197 NA non-coding upstream 82895 31219062 ~ 31219909 (-)
G2128215 LOC100380853 non-coding upstream 106000 31242167 ~ 31242441 (-)
G2128200 NA non-coding upstream 108955 31245122 ~ 31283855 (-)
G2127455 NA other downstream 529128 30553589 ~ 30555187 (-)
G2127177 NA other downstream 649461 30434435 ~ 30434854 (-)
LOC110508917 LOC106598978 other downstream 682508 30399711 ~ 30401807 (-)
LOC118944842 NA other downstream 1960573 29118684 ~ 29123806 (-)
G2128216 NA other upstream 107924 31244091 ~ 31244692 (-)
G2128242 LOC106584167 other upstream 183116 31319283 ~ 31323364 (-)
LOC110508968 LOC106598866 other upstream 575441 31708667 ~ 31761665 (-)
G2128568 NA other upstream 746548 31882715 ~ 31883140 (-)
LOC110508982 NA other upstream 886891 32023057 ~ 32029225 (-)

Expression


Co-expression Network