LOC110508941 (gp177)


Basic Information

Item Value
gene id LOC110508941
gene name gp177
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 31138086 ~ 31169294 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966586.1
GCGGCGGCGCTCCACAGATCCTTCAGTGTAGTGTTCCGCAGCGATAGGCAGGGGTGCTATTCCGTCATGTGATTCTGCTTTAGTCCTTCGAAGTTGAAAGGCAAGCAAGTCAGTGCGGGGCTAGCCTTCCTTAATCTTGGTTGCTGGAGTACTAGCTAGATGCGGTGACTTTCTTCTCGATTTCTTACTCGTGATTTTTCTTCAACTTTTTAAGATGGCCGGGGCAATTATTGAAAACATGAGCACCAAAAAGTTGGTGATCGTAGGAGTGATTCTGCTTTTATTCCAAGCGTTTTCTTTTATGGTCGGAGGCTTGATTGCTCCCAGCCCCACCACAGCAGTCCACTACCTGGCTACCAAATGTGTGGACACGGTCAAACACCATCAGAGCACCAAATGGTTCATGCCCTGGGGCCCTAACCAGTGTGACAAGATCCGGGACTTTGATGAGGCCATGGCCAAGAAGATCGAGGCAAACAACATTGTATTTGCCGTCCATATCCCCCTGCCCAACAaagagatgagcccctggttccagttTATGCTGGTCATCCTACAGTTTGACATTGCCTTCAAGATGTACAACCAGATAGAGGATGGAGCACTAGCCACCATTGACGTGGGTTTGGCCTACAGAGATGACACGCTCAGTGAGTGGACAGAGATGGCCCACTCCATAGAACAGAGGAAGCTCAGCTGCAACTTCACCACCACCAAGACGTATGAGAACGAGGGGCGCTACTATGAGTGTGACCTGCTGCCCTTCATGGAGCTGGGCAACGTGGCCCACAAGTACTACCTTCTCAACATCCGCCTGCCTGTCAGCGAACGCAAGAAGATCAACATGGGCATCGGCGAGATCAAGGACATCCGTCTGGTGGGTATCCATCAGAACGGCGGTTTCACCAAGGTGTGGTTCGCCATGAAGACCTTCCTCACACCAAGCATCCTCATCATCATGGTGTGGTACTGGAGACGCATCACCCTGATGACGCGACCCCCTGTGCTGTTGGAAAAGGTGATCTTTGCCCTGGGCTTGTGCATGACCTTCATCAACATCCCGGTGGAGTGGTTCTCTGTGGGCTTCAACTGGACCTGGATGCTGCTGTTCGGGGACATCCGGCAGGGCATCTTCTACGCCATGCTGCTCTCCTTCTGGATCATCTTCTGTGGAGAGCACCTCATGGACCAGATGGAGAGGAACCATTTCTCAATCTACTGGAAGCAGGTGGGACCCATTGTCTTCGGCTCCTTCTGCCTGTTTATCTTCGACATGTGTGAGAGGGGAGTCCAGTTGAAGAACCCTTTCTACAGTATTTGGGCTTCCGACGTGGGGACTGAGTTGGCTATGGCGTTCATCATTGTGGCGGGGATCTGTGCCTGTCTCTACTTCCTCTTCCTGTGCTTCATGGTGTTCCAAGTGTTCCGCAACATCAGTGGGAAGAGGTCCTCCCTGCCCGCCATGTCCAAGGCCAGACGCCTGCACTAtgagGGCCTTATCTTCCGGTTCAAGTTCCTCATGTTGGTCACTCTTACCTGCGCTGCAATGACTGTCATCTTCTTCATCATCAGTCAGGTGAATGAGGGCCACTGGCACTGGGGAGACTACACGGTGCAGGTGAACAGTGCCTTCTTCACGGGAATCTACGGCATGTGGAACCTCTACGTGTTCGCCATCATGTTCCTGTATGCTCCCTCACACAAACGCTACGGAGACGAGCAGTCCAGCGGAGACGCAGGAGCCAGTGGCGAGGACATCCAGCTgaccaccaccatcacccacGTGGACGGACCCACCGAGATCTACAAGATGACGGGCAAGGAGGCCCAAGAgtagcgccccccccccccccttgacatCAAACCACCTACAAACACACCTCCCTCAAACCTGGACGGTGCTTCATTTAGCCCTGTTACCCATGTGCCCCACATTGTCCCAGAAGTTCAAAAGCAACTTTATCTGTAGCCCTTTAGTCCTTTCATTTCATTGCAGACATGGGGCTAGATTGTATATTCATTTTTGACATTTGACATAGTCTGTTAACTCTGTTTGTAATGTTGGTGTTGAACAACTGTACTCTTATGAAGTCCAGGTTGTGAAAATCTGATTTGCGATGGAGTGGAAGGATGTAGAACAGCATCTGTTGGTCATGAGGTAGTTGGGGAGGGAACAAAACACTCCAGGTAGATGTTGTCTTCACAATTCTAGGATCAGCATACCATTCCTCAAATCCTAAACCAACCCATTAGGGGTAAAGTGCAAATCTGAAATTAGATCAGTGTCCAGTGGCAACGGCATCCAACTACAGGAAAAACATTGTGGGCTTTCAAGGCACTATATTGTGGCCTAACTGGTTGCCTCACTGAAGACAACATTACTTGGTTCTTTAGAGAGAACTACATTTGGATGACTGCTGTTTTTGGCACTCCGCCTCTGCAGTTTTAGATTGAAACAACCAGTAGGACAAATAAGTGTATGTCAATGGTACAAGGTCCAAGATGACCACTTTCTGAAGATCTGTCAAAAGAAAGCATATCTCTGCAAGTTGTCAGTAATATCTTTGTCTTTTTTGTCACTTCTGTCCGCACTCACGTTCAGCTGTACACATCCATGGAACTTTCTAGAGACTACTGTGTTCTCTTGTCTATCACTCTCCCAAGTGGGGGGATAATACCTTTTTGtattgtgggggaaaaaaatgacAAACCACAGGGCCGTTTTGGGAAACGCCAAGTTCATTATGTTACgatgtagatatatatattttataaagtGCTTATTTTCAACTGTATGAAAGATTTGCATATGCTGTATCACTGTCTGTtggcaaaaataataataattgagatTCGAAGATGACTATGACGTGGTAGTGTAGTAGTTTTGTGCTTTTTATGctaaattaaataaaatgtttactTTATG

Function

NR:

description
protein wntless homolog

GO:

id name namespace
GO:0016055 Wnt signaling pathway biological_process
GO:0017147 Wnt-protein binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966586.1 True 2929 mRNA 0.48 12 31138086 31169294

Neighbor

gene id symbol gene type direction distance location
LOC110508940 gbg12 coding downstream 1919 31084315 ~ 31136167 (-)
LOC110508938 LOC106598935 coding downstream 133797 30995095 ~ 31004289 (-)
LOC110508937 NA coding downstream 157634 30978719 ~ 30980452 (-)
ptger4c LOC106599187 coding downstream 230111 30905879 ~ 30907975 (-)
LOC110508928 mrpl34 coding downstream 431495 30705085 ~ 30706591 (-)
LOC110508942 LOC106598932 coding upstream 4633 31173927 ~ 31214079 (-)
LOC118944807 LOC106598929 coding upstream 84639 31253933 ~ 31254937 (-)
LOC110508943 LOC106598918 coding upstream 89775 31259069 ~ 31280002 (-)
LOC110508945 LOC106598921 coding upstream 115852 31246275 ~ 31305211 (-)
LOC110508948 NA coding upstream 149981 31319275 ~ 31323287 (-)
G2127817 gbg12 non-coding downstream 1995 30995158 ~ 31136091 (-)
G2127673 NA non-coding downstream 151972 30985073 ~ 30986114 (-)
G2127637 NA non-coding downstream 206620 30924247 ~ 30931466 (-)
G2127615 NA non-coding downstream 253301 30884465 ~ 30884785 (-)
G2127614 NA non-coding downstream 254675 30883183 ~ 30883411 (-)
G2128197 NA non-coding upstream 49768 31219062 ~ 31219909 (-)
G2128215 LOC100380853 non-coding upstream 72873 31242167 ~ 31242441 (-)
G2128200 NA non-coding upstream 75828 31245122 ~ 31283855 (-)
G2127455 NA other downstream 582899 30553589 ~ 30555187 (-)
G2127177 NA other downstream 703232 30434435 ~ 30434854 (-)
LOC110508917 LOC106598978 other downstream 736279 30399711 ~ 30401807 (-)
LOC118944842 NA other downstream 2014344 29118684 ~ 29123806 (-)
G2128216 NA other upstream 74797 31244091 ~ 31244692 (-)
G2128242 LOC106584167 other upstream 149989 31319283 ~ 31323364 (-)
LOC110508968 LOC106598866 other upstream 542314 31708667 ~ 31761665 (-)
G2128568 NA other upstream 713421 31882715 ~ 31883140 (-)
LOC110508982 NA other upstream 853764 32023057 ~ 32029225 (-)

Expression


Co-expression Network