LOC110508942 (LOC106598932)


Basic Information

Item Value
gene id LOC110508942
gene name LOC106598932
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 31173927 ~ 31214079 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966574.1
TTGTATTCGCGTCCACATCTGTTTCTGCTCACTTAGCACCCATTGTCTCATTTTCTATTACACATCTGTCAAACCagctgtCATGGTGTCACACAAGGAGTTTGTGACTGCAGGGAAGGAGAAAGGGCTGCAGGTGTGGCGTATTGAGAACATGGACCTGAAGCCTGTCCCCAAGGCCCTGCACGGCAACTTCTACACAGGAGATGCCTATCTGCTCCTCTACACAACTGCAGCTCCCTCCTACTACATACACATGTGGATGGgggaTGAGTGTTCTCAGGATGAGAGAGGAGCGGCGGCCATCTTTGCCACCCAGCTGGATGACTTCCTGGGCGGAGGGCCGGTCCAGTTCAGAGAGGTCCAGAACAACGAGTCCATCACCTTCTTGGGCTACTTTAAGTCTGGCATCAAGTACAAGCAAGGGGGCGTGGCTTCAGGCTTCCAGCACGTTGTGACCAATGACATGAGCGTGAAGCGCTTGTTGCACATCAAGGGGAGGCGGACCATCCGGGCCACGGAGGTGGTACTGTCCTGGGCCAGCTTCAACCAGGGAGACTGCTTTATCGTGGACCTGGGCAAGGATATCTACCAGTGGTGTGGCAGTGAGAGTAACCGCTTCGAGAGACTGAAGGCCTCCCAGGTGGCCATCGACATCAGGGACAACGAGAGGAACGGCAGGGCCAAGCTCCACATGGTGGAGGATGGTGCTGAGCCACAGGAACTCACTGAGGCTCTGGGGCCCAAACCCAGTATCCCCCCTGGCACCCCTGATGATGAGAAGGTGGACACCTCCAACAGGAAGAAGGGTGCCCTCTACATGATCTCCGATGCCTCTGGCTCTATGAAGTCGTCGGTGGTGGCCTCGTCCAGCCCCTTCAAACAGGCCATGCTGACCGCCGAGGAGTGCTACATCCTGGACAACGGAGTGGACAAGAACGTCTTCGTATGGAAAGGACCCAAGGCCAATGCAGCCGAGCGCAAAGCAGCCATGTCAGCAGCCCAGCAGTTCATCAAAGAGAAGGGCTACTCCGACAAGACACAGATCCAGGTACTACCAGCAGGAGGCGAGACCACTCTGTTCAAGCAGTTCTTCAGGGACTGGAAGGACAAGGACCAGACCACGGGCCCCAGTAAGGCCTACACCATCGGCCGCATCGCCAAGGTGGAGCAAGTGCCCTTCGACGCCTCCACCCTCCACTCCAACAACAACATGGCCGCCCAGCACAACATGGTGGACGACGGCAAGGGCAAAGTCCAGATCTGGCGTGTTGAGGATGGTGATAAAGTGGCTGTGGATCCCTCCTCTTATGGCCAGTTCTACGGAGGAGACTGTTACCTCATCCTCTACAGCTACAGGCTGGGAGGCAGGGAGCAGCACATCATCTACACCTGGCAGGGGCTGAAGTGCACCCAGGATGAGCTGGCAGCCTCTGCCTTCCTCACGGTGAAGCTGGATGACTCTATGGGAGGAGCCCCTGTTCAGGTGCGTGTGACCCAGGGTCAGGAACCCCCCCACCTGATGAGCCTGTTCCAGGGCAAGCCCATGATGGTCCATAATGGAGGGACGTCCCGTAAAGGAGGACAGTCGGGTACTGGCAGCACCCGCCTCTTCCACATTCGTCAATCCTCCACCCGCGCTACACGAGCTGTAGAGgtagaGCCCTCTGCCTCCTTCCTGAACACCAATGACGTGTTTGTGCTCAAATCTCCCACCGCCATGTTtgtgtggagaggggtgggtgCCAGTGAGGAGGAAATGGCCGCCGCCAAGCACGTTGTGGGTTTCCTGGGTGGCAGTGGCAGTAATGTGTCTGAGGGCAAGGAGCCAGCTGGGTTCTGGTCTGCCCTGGGAGGGAAGAAGGAGTACCAGACTTCCAAGAGTTTGCAGAACATGGTCAAACCTCCACGCCTGTTTGGCTGCTCCAACAAGACCGGATGCCTCAGTGTGGAAGAGGTTCCTGGAGACTTCCAACAGACTGACCTGGCCACTGATGATGTCATGTTGCTGGACACCTGGGACCAGATCTTCCTCTGGATCGGCAATGAAGCAAATGCAGAAGAGAGAACTGGAGCACCCAAAATAGctaAGGACTATGTGGACTCAGACCCTTCTGGACGCAGAGGACTGTCCATCACCACCATCAAACAGGGGGCTGAACCCCCAACCTTCACTGGCTGGTTCCAGGCGTGGGACCCCAAAATGTGGGAAACAGACCCTCTGAAGATAATCCATGCCCGCTTCTAAATGCCAAACTCCACCCCCTTACCTATCTGGCACTTACACATACGCATGTCATTCCCCCGCCCCGCTCTTTGGATCAGAGTACCAGTATAACACCCTGGACTGCTATTTTAATTAGACTTGTTTTTATGCCATAACGTTGTCTCTTTTATACTCATACGAAACATTCACCTAGCATGCCTTTTTTTATCTGCTGTTGGAGCAGAGAAAAACCTTCTCTTTTGGAGCCTGTTTATTCCAGTAGTCTATTGAATCCAACGGGTATTTTGTTATACTTTGTGAAGTCATgatatgtgattaccattgagaCTTAGGTCTCATTTGAAAGCATGCTGCATTTTAACAGGATATCTCTGCCGGAGAAAAATGTCtgctcttcttctttttttttttttttacattacttTCGATGATTCTGAAATGGTATTATGGATGGCTTTTTCAATTAAATTCCTAGTATTTCTAGAGAAACTCTAGAAATGAGAACACGTTGGTAGCCTATATTTTCTATGTTGACAGGTGGATAGGAACGACAGCAGACCAAGGTATCATACGTTTAACATCAGCACAACCTCTTCCATGTAACATTTAATCTTTCGTCTGAAGTTAGTCAAATAGTGGAAAAAACTGAGAACAGACAGCCACAGTACTTCAACAACGGAAGACTCCCTCAAGAGGATGTTATCTTTTTACACACCACCTGGCTAGGCGGAGTTGTCTTCCTTCTTCCCACCTTTAGATCTACAGTGGCAGTCAATGATtaatataaaccctggattgctaa

Function

NR:

description
gelsolin-like

GO: NA

KEGG:

id description
K05768 GSN; gelsolin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966574.1 True 3026 mRNA 0.52 17 31173927 31214079

Neighbor

gene id symbol gene type direction distance location
LOC110508941 gp177 coding downstream 4633 31138086 ~ 31169294 (-)
LOC110508940 gbg12 coding downstream 37760 31084315 ~ 31136167 (-)
LOC110508938 LOC106598935 coding downstream 169638 30995095 ~ 31004289 (-)
LOC110508937 NA coding downstream 193475 30978719 ~ 30980452 (-)
ptger4c LOC106599187 coding downstream 265952 30905879 ~ 30907975 (-)
LOC118944807 LOC106598929 coding upstream 39854 31253933 ~ 31254937 (-)
LOC110508943 LOC106598918 coding upstream 44990 31259069 ~ 31280002 (-)
LOC110508945 LOC106598921 coding upstream 71067 31246275 ~ 31305211 (-)
LOC110508948 NA coding upstream 105196 31319275 ~ 31323287 (-)
LOC118944907 NA coding upstream 106428 31320507 ~ 31320630 (-)
G2127817 gbg12 non-coding downstream 37836 30995158 ~ 31136091 (-)
G2127673 NA non-coding downstream 187813 30985073 ~ 30986114 (-)
G2127637 NA non-coding downstream 242461 30924247 ~ 30931466 (-)
G2127615 NA non-coding downstream 289142 30884465 ~ 30884785 (-)
G2127614 NA non-coding downstream 290516 30883183 ~ 30883411 (-)
G2128197 NA non-coding upstream 4983 31219062 ~ 31219909 (-)
G2128215 LOC100380853 non-coding upstream 28088 31242167 ~ 31242441 (-)
G2128200 NA non-coding upstream 31043 31245122 ~ 31283855 (-)
LOC110508928 mrpl34 other downstream 467382 30705085 ~ 30706591 (-)
G2127455 NA other downstream 618740 30553589 ~ 30555187 (-)
G2127177 NA other downstream 739073 30434435 ~ 30434854 (-)
LOC110508917 LOC106598978 other downstream 772120 30399711 ~ 30401807 (-)
LOC118944842 NA other downstream 2050185 29118684 ~ 29123806 (-)
G2128216 NA other upstream 30012 31244091 ~ 31244692 (-)
G2128242 LOC106584167 other upstream 105204 31319283 ~ 31323364 (-)
LOC110508968 LOC106598866 other upstream 497529 31708667 ~ 31761665 (-)
G2128568 NA other upstream 668636 31882715 ~ 31883140 (-)
LOC110508982 NA other upstream 808979 32023057 ~ 32029225 (-)

Expression


Co-expression Network