LOC110508948


Basic Information

Item Value
gene id LOC110508948
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 31319275 ~ 31323287 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110508948
TGTCGTCATATACTGTCAACATTAAACATGTTATGCTATTACTTGTCTTGTGCATTTCTATGTCTGGTGTTTGTTTCTTTTGAAATGGATGACGTTGGATTTGTGATATGAACTTTCACCGGTCAGCTGAATGCTAGGTTCCAGCGTGGTGATATGGCGCTCAAAGGCCTTACTTTGACATTTCCTAGTAATAAATAATGTCATGCCAATTGCATAACGTGTTTGTTGTTAATATATCGGCCTGCTTATCCTCCATGCGAATGAAACTGGTCATTGTGTGAAGAAGTCGTCAGTCGATACTCTTGCTTGAAAGTCCTAACGTTACCTAGCAAGTTAAGTTTGCAAATTGGCGACCAGTCTGAAGAAAAGTGTTTCAACAGCTAGCTGTTCCATGGAGATCGTACACTTCAGTAATATGTATTGCACGTTAGGTGAGTGACACCCATATGTCACCAGAAATATGCAATGGCAgctgtctcacctctcctctccacagggCTTCGTGAAAGTAGTGAAAAGTAAGGCGTACTTCAAGAGATACCAGGTGAAATTCAGGAGAAGGCGAGAGGGTAAGACTGACTACTTCGCCCGTAAGCGCCTGGTCATCCAAGACAAGAACAAGTACAACACACCCAAATACAGGATGATTGTGAGGTTCTCCAACAGAGATATCTGTTGCCAGGTGATTGCTGACCAGATTGTCGCTGCTGCCTATTCCCATGAGCTGCTCAAATATGGTATCACCGTGGGACTGACAAATTACGCTGCAGCCTACTGCACGGGCCTTCTGCTGGCCCGCAGGCTACTGAACAAGTTCGGCCTGGATCAGGTGTACGAGGGCCAGGTGGAGGTGACTGGAGACGAGTTCAACGTGGAGAGTATAGACGGCCAGCCGGGGGCCTTCACGTGTTTCCTAGACGCCGGGCTCGCCAGGACGTCCACAGGAAACAAGGTGTTCGGAGCACTAAGGGTGCTGTCGACGGTGGCCTCTCAATTCCTCACAGcACAAAACGATTCCCTGGCTACGACGTGGAGGGCAAAGAGTTCAACACAGAGATGCATCGCAAACACATCATGGGCATGAACGTGTCGGACTACATGAGCTACCTGATGGAGGAGGACGAAGACGCCTACAAGAAAGTTCTCGCGCTTCATAAAGAACGGAGTCACGCCAGACACAgtagaggagatgtacaAGAAAGCACACACCGCCATCAGAGAGAACCCAGTCCACGAAAAGAAACCCAAAAAAGACGTCAAAAAGAAGAGGTGGAACCGCGCCAAACTTTCGCTGGCACAGAGAAAGGACCGCGTCGCCCAGAAAAAGGCCAGCTTTCTACGAGCACAGGAAGCAGAGGCAGCGGACGGTTAGAGGGACGGGGACCACTGCCCGTTCCAAAGACAACCACTGCACATTGGCTTAATAAATTTATTACAAATGA

Function

NR:

description
60S ribosomal protein L5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110508948 True 1442 mRNA 0.49 7 31319275 31323287

Neighbor

gene id symbol gene type direction distance location
LOC110508945 LOC106598921 coding downstream 14064 31246275 ~ 31305211 (-)
LOC110508943 LOC106598918 coding downstream 39273 31259069 ~ 31280002 (-)
LOC118944807 LOC106598929 coding downstream 64338 31253933 ~ 31254937 (-)
LOC110508942 LOC106598932 coding downstream 105196 31173927 ~ 31214079 (-)
LOC110508941 gp177 coding downstream 149981 31138086 ~ 31169294 (-)
LOC118944817 NA coding upstream 18515 31341802 ~ 31343993 (-)
LOC110508952 NA coding upstream 20708 31343995 ~ 31351517 (-)
cdc7 cdc7 coding upstream 38424 31361711 ~ 31369517 (-)
LOC110508218 LOC106598907 coding upstream 51082 31374369 ~ 31397685 (-)
znf326 znf326 coding upstream 83412 31406699 ~ 31410904 (-)
G2128200 NA non-coding downstream 35420 31245122 ~ 31283855 (-)
G2128215 LOC100380853 non-coding downstream 76834 31242167 ~ 31242441 (-)
G2128197 NA non-coding downstream 99366 31219062 ~ 31219909 (-)
G2128266 NA non-coding upstream 48302 31371589 ~ 31371788 (-)
G2128288 NA non-coding upstream 61918 31385205 ~ 31385435 (-)
G2128292 NA non-coding upstream 71567 31394854 ~ 31395201 (-)
G2128216 NA other downstream 74583 31244091 ~ 31244692 (-)
LOC110508928 mrpl34 other downstream 612730 30705085 ~ 30706591 (-)
G2127455 NA other downstream 764088 30553589 ~ 30555187 (-)
G2127177 NA other downstream 884421 30434435 ~ 30434854 (-)
LOC110508917 LOC106598978 other downstream 917468 30399711 ~ 30401807 (-)
LOC110508968 LOC106598866 other upstream 388321 31708667 ~ 31761665 (-)
G2128568 NA other upstream 559428 31882715 ~ 31883140 (-)
LOC110508982 NA other upstream 699771 32023057 ~ 32029225 (-)
asip2b agrp2 other upstream 738762 32062049 ~ 32187519 (-)
LOC110508997 NA other upstream 905119 32228406 ~ 32230258 (-)

Expression


Co-expression Network