Gene
RNA
| Item | Value |
|---|---|
| gene id | trnap-ugg-71 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 31521501 ~ 31521572 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: serine/threonine-protein kinase Nek3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnap-ugg-71 | True | 72 | mRNA | 0.61 | 1 | 31521501 | 31521572 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508960 | LOC106598900 | coding | downstream | 10278 | 31508406 ~ 31511223 (-) |
| cldn18 | LOC106598896 | coding | downstream | 13214 | 31505514 ~ 31508287 (-) |
| LOC110508958 | LOC106598897 | coding | downstream | 30663 | 31471294 ~ 31490838 (-) |
| LOC110508219 | LOC106598894 | coding | downstream | 55054 | 31433122 ~ 31466447 (-) |
| LOC110508955 | lrrc8d | coding | downstream | 102411 | 31411807 ~ 31419090 (-) |
| stk25b | stk25 | coding | upstream | 21186 | 31542758 ~ 31560379 (-) |
| trnav-aac-156 | NA | coding | upstream | 39154 | 31560726 ~ 31560798 (-) |
| thap4 | thap4 | coding | upstream | 55306 | 31576878 ~ 31584196 (-) |
| nilt2 | nilt2 | coding | upstream | 157851 | 31679423 ~ 31694153 (-) |
| LOC110508968 | LOC106598866 | coding | upstream | 187095 | 31708667 ~ 31761665 (-) |
| G2128330 | NA | non-coding | downstream | 9495 | 31511784 ~ 31512006 (-) |
| G2128278 | NA | non-coding | downstream | 16625 | 31504064 ~ 31504876 (-) |
| G2128326 | NA | non-coding | downstream | 18579 | 31502277 ~ 31502922 (-) |
| G2128286 | NA | non-coding | downstream | 27076 | 31491194 ~ 31494425 (-) |
| G2128307 | NA | non-coding | downstream | 52945 | 31468320 ~ 31468556 (-) |
| G2128336 | NA | non-coding | upstream | 1964 | 31523536 ~ 31523871 (-) |
| G2128341 | NA | non-coding | upstream | 19719 | 31541291 ~ 31541507 (-) |
| G2128345 | NA | non-coding | upstream | 30190 | 31551762 ~ 31554729 (-) |
| G2128353 | bok | non-coding | upstream | 48905 | 31570477 ~ 31572013 (-) |
| G2128242 | LOC106584167 | other | downstream | 198137 | 31319283 ~ 31323364 (-) |
| G2128216 | NA | other | downstream | 276809 | 31244091 ~ 31244692 (-) |
| LOC110508928 | mrpl34 | other | downstream | 814956 | 30705085 ~ 30706591 (-) |
| G2127455 | NA | other | downstream | 966314 | 30553589 ~ 30555187 (-) |
| G2127177 | NA | other | downstream | 1086647 | 30434435 ~ 30434854 (-) |
| G2128568 | NA | other | upstream | 361143 | 31882715 ~ 31883140 (-) |
| LOC110508982 | NA | other | upstream | 501486 | 32023057 ~ 32029225 (-) |
| asip2b | agrp2 | other | upstream | 540477 | 32062049 ~ 32187519 (-) |
| LOC110508997 | NA | other | upstream | 706834 | 32228406 ~ 32230258 (-) |
