nilt3 (nilt3)


Basic Information

Item Value
gene id nilt3
gene name nilt3
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 31718689 ~ 31763088 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001160493.1
CTGTAACTGGCTGGTAACTGGACATAGAAGTATTGAGGGGACTGGAGTAAACAGGGTTTACAGGGTCTAAAGAGACTTGAACTAGCTGGGAGCCACAAGTCATCATGGTTATCCTGCTGGTCCTCACACGGAAGGTTGTCCTCCTCTTAGCTGCTATGTGGAGTGTGTGTTCAGCAGAGTTGATCACAGTGGAAAGATATAAGGGAGGCAAGGCAGAGATCAGATGCCCCtatagagaggagtggaggagccaCCAGAAGTACATATGCAAAGGCAGCAAAATGGAGTGTATAACATTTTTGGGAGACAATGATATTGAGACTGAGGATGAAGAACGAAGCTCTAAATGGAGATACTCCCTATATGACGACAAAGGGGTCAGAGTCTTCATTGTGACCATCACCAACCTGATGTCAGATGATGCTGGAACATACTGGTGTGGAGTGAAACGATTTGGACTGGACCCTGAAGTGTATGGAGATTGGTGTTGTGAAAACCCAGCTGAAGTGACAGGCTCTGAAGAAGTGACAGGCTATGAAGAACGGTCAGTCTCCATCCATTGTATGTATAATGAAAAAAATGAAGACAATGAGAAATACTTCTGCAAAGCGAATACACTATCTAAGTGTGTAGTTGATGTAAAAGTGACAACAACCAAAAGCCAGAACGGGAGGTTCTCACTGTTCGACAACAGGACAGCCGGAGCATTCACCGTGACCATCACCAGACTAACCCAAGAGGATGCTGGGAGATATCTCTGTGGTGTACAGAACAACCACACAACCAATACCCTGTCAGCAGTTCAGCTTGTTATCAAGATTTCACCAACTTTATCATCACCACCTATTGCCACCTCCGTCTCACCATCATCCGTGTCATCACCATCATCCATCTTAACATCAACACACAACAGTTCTGATACATCAGTGGTCATCATAGTATCTGGGACTCTGGTCATGCTGCTATTGGTGCTTGTAGTCAGCCTGCTCATAGTCTATAGATGGAAATTCAACAAGgaaacagCTGACTCCTCAGCACCCAGGGTGAACACAGACACTGGGATCAACagagaggtcagtggttgtcatggtgatggtGACTATGAGGAGATAGAGGACTGCCCCCTACAGTCCAGTTCAGGTGGTGAGACCACCACCATCTACGCCACCGCCAACTTACCCACAAGAACCTCTGACTCTCTCAACTACGCCAACGTCAACTTCCACAAGGACCCCAGCTGCCCCAATGAGGCCACTGTCGCCATCGCTAAAGAGGGCACTTCTCCTGGTTACTATGCCACCGTCAACATTGGTCAAAGCCCCGCCTACTCTACTGTCAATCATCCACACAGCACCTCTGAGGCTCCTCCCATTTACTATACAGTCAGCAAACCCAGAGACCTCTGAGTCACTGACAACCAATCACAAGGGACATATTCACACTGGCAACAAATCATAAGTTATATGttattaaaa
>XM_021588580.2
ctcagaGTGGTTCTCATACACACTGCAGGAGCAGACCTTCCTGTAACTGGCTGGTAACTGGACATAGAAGTATTGAGGGGACTGGAGTAAACAGGGTTTACAGGGTCTAAAGAGACTTGAACTAGCTGGGAGCCACAAGTCATCATGGTTATCCTGCTGGTCCTCACACGGAAGGTTGTCCTCCTCTTAGCTGCTATGTGGAGTGTGTGTTCAGCAGAGTTGATCACAGTGGAAAGATATAAGGGAGGCAAGGCAGAGATCAGATGCCCCtatagagaggagtggaggagccaCCAGAAGTACATATGCAAAGGCAGCAAAATGGAGTGTATAACATTTTTGGGAGACAATGATATTGAGACTGAGGATGAAGAACGAAGCTCTAAATGGAGATACTCCCTATATGACGACAAAGGGGTCAGAGTCTTCATTGTGACCATCACCAACCTGATGTCAGATGATGCTGGAACATACTGGTGTGGAGTGAAACGATTTGGACTGGACCCTGAAGTGTATGGAGATTGGTGTTGTGAAAACCCAGCTGAAGTGACAGGCTCTGAAGAAGTGACAGGCTATGAAGAACGGTCAGTCTCCATCCATTGTATGTATAATGAAAAAAATGAAGACAATGAGAAATACTTCTGCAAAGCGAATACACTATCTAAGTGTGTAGTTGATGTAAAAGTGACAACAACCAAAAGCCAGAACGGGAGGTTCTCACTGTTCGACAACAGGACAGCCGGAGCATTCACCGTGACCATCACCAGACTAACCCAAGAGGATGCTGGGAGATATCTCTGTGGTGTACAGAACAACCACACAACCAATACCCTGTCAGCAGTTCAGCTTGTTATCAAGATTTCACCAACTTTATCATCACCACCTATTGCCACCTCCGTCTCACCATCATCCGTGTCATCACCATCATCCATCTTAACATCAACACACAACAGTTCTGATACATCAGTGGTCATCATAGTATCTGGGACTCTGGTCATGCTGCTATTGGTGCTTGTAGTCAGCCTGCTCATAGTCTATAGATGGAAATTCAACAAGgaaacagCTGACTCCTCAGCACCCAGGGTGAACACAGACACTGGGATCAACagagagggttgtcatggtgatggtGACTATGAGGAGATAGAGGACTGCCCCCTACAGTCCAGTTCAGGTGGTGAGACCACCACCATCTACGCCACCGCCAACTTACCCACAAGAACCTCTGACTCTCTCAACTACTACGTCGCCATCGCTAAAGAGGGCACTTCTCCTGGTTACTTTGCCACTGTCAACATTGGTCAAAGCCCCGCCTACTCTACTGTCAATCATCCACACAGCACCTCTGAGGCTCCTCCCATCTATTATACAGTCAGCAAACCCAGAGATGCCTGAGTCACTGACAACCAATCACAAGGGACATATAC

Function

NR:

description
NILT3 leukocyte receptor isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001160493.1 False 1475 mRNA 0.47 8 31718689 31763048
XM_021588580.2 True 1427 mRNA 0.47 7 31751423 31763088

Neighbor

gene id symbol gene type direction distance location
LOC110508968 LOC106598866 coding downstream 2875 31708667 ~ 31761665 (-)
nilt2 nilt2 coding downstream 24536 31679423 ~ 31694153 (-)
thap4 thap4 coding downstream 134493 31576878 ~ 31584196 (-)
trnav-aac-156 NA coding downstream 157891 31560726 ~ 31560798 (-)
stk25b stk25 coding downstream 158310 31542758 ~ 31560379 (-)
LOC110508970 LOC106598862 coding upstream 59054 31822142 ~ 31859100 (-)
LOC110508975 LOC106598852 coding upstream 189111 31952199 ~ 31954935 (-)
LOC110508977 NA coding upstream 197413 31958284 ~ 31967067 (-)
LOC110508978 NA coding upstream 238167 32001255 ~ 32014890 (-)
LOC110508982 NA coding upstream 259969 32023057 ~ 32029225 (-)
G2128418 LOC106598876 non-coding downstream 48902 31668715 ~ 31669787 (-)
G2128399 NA non-coding downstream 75226 31638710 ~ 31643463 (-)
G2128386 NA non-coding downstream 98540 31619740 ~ 31620149 (-)
G2128385 LOC106568769 non-coding downstream 99164 31616368 ~ 31619525 (-)
G2128316 bok non-coding downstream 125518 31573484 ~ 31593171 (-)
G2128522 NA non-coding upstream 8735 31771823 ~ 31772793 (-)
G2128524 NA non-coding upstream 10333 31773421 ~ 31773659 (-)
G2128536 LOC106598864 non-coding upstream 32345 31795433 ~ 31801315 (-)
G2128556 NA non-coding upstream 114304 31877392 ~ 31879509 (-)
G2128569 NA non-coding upstream 120491 31883579 ~ 31884197 (-)
G2128242 LOC106584167 other downstream 395325 31319283 ~ 31323364 (-)
G2128216 NA other downstream 473997 31244091 ~ 31244692 (-)
LOC110508928 mrpl34 other downstream 1012144 30705085 ~ 30706591 (-)
G2127455 NA other downstream 1163502 30553589 ~ 30555187 (-)
G2127177 NA other downstream 1283835 30434435 ~ 30434854 (-)
G2128568 NA other upstream 119627 31882715 ~ 31883140 (-)
asip2b agrp2 other upstream 298961 32062049 ~ 32187519 (-)
LOC110508997 NA other upstream 465318 32228406 ~ 32230258 (-)
G2130393 NA other upstream 1635459 33398547 ~ 33399084 (-)

Expression


Co-expression Network