LOC110508997


Basic Information

Item Value
gene id LOC110508997
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 32228406 ~ 32230258 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002471384.2
GAGTCAACTTCCTCACGCTGAACATAGATTGTCAGACGGACTGGACTCTGAACAGAATCTTCCCACATCACAACTCAGTCGGTGCTCTGTCGTCTGAAACAACATCATGCTTTTCCTATTACTTTGTGTTGGATGTGTTGCTTTGTCTGCAGGGCAATCCTTTGCTTCAACACCTACAATGGGACCATGGGCTACCACGACACAGGTGACAACACCTCCAACTCTTACTACCCCTTATGTGGACCCACCTTTTGGTACTAAACCCCTGGAAAGTGGATTTGCAATTCTTCAGGTCGCTGTCCAATCTTATCAGGAGCTAAATGAGACTACAGTTGGTTCTTTCTTCAGTCAGATCTACGACATCGTTCGGGCGAAGCGACCTGATCTGAAATTTCGACTGACCGTGAAAACTGTCCAGAAAGTTTGATGGATTATGATCCAAGGCATAGCAGATTGAAGTTCTAGTGGTACATCATGTTCTGCAGATGTGAACTATTGTACTGTATTTTCAATGATTTTATGCTGTTTAATATCAGTCATTATATTCATGTTAATAATATATTTGAATGTATAATTTCATTGACTTATTGACTTGCTGCGCATTCCAATCACCATCTGGGGGAGGAGCTGTAATTCAAGAGTTATGTCACAACTTTTCCCACTTTCATAGAATCTTGTCATCTGCGTCCAGTGTTTTCTGATGGATTTGATGTTGGACTGAATAGTCCTAACTACTGTAATCTTTTCTTTGGCTATAAACATGTTACAAATGCTGCAA
>TU2434271
ACTCTGAACAGAATCTTCCCACATCACAACTCAGTCGGTGCTCTGTCGTCTGAAACAACATCATGCTTTTCCTATTACTTTGTGTTGGATGTGTTGCTTTGTCTGCAGGGCAATCCTTTGCTTCAACACCTACAATGGGACCATGGGCTACCACGACACAGGTGACAACACCTCCAACTCTTACTACCCCTTATGTGGACCCACCTTTTGGTACTAAACCCCTGGAAAGTGGATTTGCAATTCTTCAGGTCGCTGTCCAATCTTATCAGGAGCTAAATGAGACTACAGTTGGTTCTTTCTTCAGTCAGATCTACGACATCGTTCGGGCGAAGCGACCTGATCTGAAATTTCGACTGACCGTGAAAACTGTCCAGAAAGTTTGATGGATTATGATCCAAGGCATAGCAGATTGAAGTTCTAGTGGTACATCATGTTCTGCAGATGTGAACTATTGTACTGTATTTTCAATGATTTTATGCTGTTTAATATCAGTCATTATATTCATGTTAATAATATATTTGAATGTATAATTTCATTGACTTATTGACTTGCTGCGCATTCCAATCACCATCTGGGGGAGGAGCTGTAATTCAAGAGTTATGTCACAACTTTTCCCACTTTCATAGAATCTTGTCATCTGCGTCCAGTGTTTTCTGATGGATTTGATGTTGGACTGAATAGTCCTAACTACTGTAATCTTTTCTTTGGCTATAAACATGTTACAAATGCTGCAACTGTTCTCACACTCATGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002471384.2 False 778 mRNA 0.41 4 32228425 32230258
TU2434271 True 753 TUCP 0.41 4 32228406 32230214

Neighbor

gene id symbol gene type direction distance location
LOC110508994 LOC106598832 coding downstream 26601 32191802 ~ 32201824 (-)
asip2b agrp2 coding downstream 40906 32062049 ~ 32187519 (-)
LOC110508991 LOC106598834 coding downstream 99054 32119973 ~ 32129371 (-)
tsen15 tsen15 coding downstream 123714 32100303 ~ 32104711 (-)
LOC110508985 LOC106598838 coding downstream 140831 32074971 ~ 32087594 (-)
LOC110508996 NA coding upstream 11534 32240882 ~ 32243585 (-)
ccdc39 ccdc39 coding upstream 13858 32244116 ~ 32263430 (-)
dcnl1 LOC106598823 coding upstream 33385 32263643 ~ 32267018 (-)
LOC110509000 b3gnt5 coding upstream 50645 32280903 ~ 32292193 (-)
LOC110509001 LOC106598815 coding upstream 81813 32312071 ~ 32332419 (-)
LOC110508982 NA non-coding downstream 199200 32023057 ~ 32029225 (-)
LOC110508978 NA non-coding downstream 213535 32001255 ~ 32014890 (-)
LOC110508977 NA non-coding downstream 265075 31958284 ~ 31967067 (-)
G2128608 LOC106599183 non-coding downstream 292781 31935028 ~ 31935644 (-)
G2129021 NA non-coding upstream 37449 32267707 ~ 32268032 (-)
G2129038 NA non-coding upstream 66935 32297193 ~ 32297394 (-)
G2129041 NA non-coding upstream 75041 32305299 ~ 32305562 (-)
G2129044 NA non-coding upstream 79152 32309410 ~ 32309627 (-)
G2128568 NA other downstream 345285 31882715 ~ 31883140 (-)
LOC110508968 LOC106598866 other downstream 490933 31708667 ~ 31761665 (-)
G2128242 LOC106584167 other downstream 905061 31319283 ~ 31323364 (-)
G2130393 NA other upstream 1168289 33398547 ~ 33399084 (-)
G2130771 LOC106598333 other upstream 1809948 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 1811180 34041438 ~ 34068073 (-)
LOC110509052 LOC106598333 other upstream 1811311 34038788 ~ 34058344 (-)
G2131621 NA other upstream 2255611 34485869 ~ 34486176 (-)

Expression


Co-expression Network