dcnl1 (LOC106598823)


Basic Information

Item Value
gene id dcnl1
gene name LOC106598823
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 32263643 ~ 32267018 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001160591.1
GAGGCAGCTGGATGGGAAAAAGGGAGTCGGGCAATTACAAACATGAACAAGCTGAAGTCCTCACAGAAGGATAAAGTTAGACAGTTCATGATCTTCACACAATCAAATGAGAAGACGGCATTGACCTGTCTGTCACAGAATGACTGGAAACTAGATGTCTCCACAGACAACTTTTTCCAAAATCCAGACCTCTACCATCCAAATCTAAAGGGAGTGTTGGACAAGAAAAGGTTAGAACAACTCTACAACAGATACAGAGACCCACAAGATGACAACAAGATTGGAATAGATGGCATCCAGCAGTTCTGTGACGACCTGGGCTTGGATCCGGCCAGTATTAGTGTGCTCTTCATCGCCTGGAAGTTCCGGGCTGCAACACAGTGCGAGTTCTCCAGACAGGAGTTCATGGATGGGATGGCAGAACAAGGGTGTGACAGTATAGAGAAACTAAAAGCCCAACTACCAAAAATGGAGCAAGAGTTAAAAGACCATGGGAAATTTAAGGACTTTTACCAGTTCACATTTAACTTTGCAAAGAATCCTGGCCAGAAAGGTTTGGACTTAGAAATGGCAATTGCGTATTGGAATTTAGTACTGGCTGGAAGATTCAAATTCCTGGACCTGTGGAACAAATTTTTAGTGGAGCACCATAAACGATCAATCCCTAAGGACACCTGGAACCTCTTGTTAGACTTCAGCACAATGATAACTGATGACATGTCCAATTACGACGAGGAAGGAGCATGGCCAGTCCTCATTGACGATTTTGTGGAGTTTGCACGACTGCACATTGGGACCAAAAGCACCGCTGTCTAGGGACCGCCCAAACTCGGAGGAACGTCCATACGTTTGTTTATACAAAAAACACACAACCGAGGCGGAGAAACGGAGCACAGGGGACTGCACTGAGCTGAGATCTATGTTGCCTTTTCCAACCCTCAGGACTGAGATGTTTTACACAACAGACAATATAAAAGGCATATCTCCTCGTCGGTCGTCTTGTGGTGGTTTGGGATTTTATCTTTAGTATGGGGCTTTTTTCGTGTCAACTCTAGCCAACTGGAGAGGAGTCGCCATCCTGGACCTTACAGTTCCTGTCCCAGTGTTTAGTTGACACAGTCGAGGTTCACGTGAAGCAAACCGACACCCCAAAAAGACAAATACAATTGTATCGTATTCTAAACACGATGGTCCGTGAGGGAATGTCATTCTTTAAATATTAAATTAAATTTTAATACTTTGTGTGCATTCCTGCTATGAATATGAATTTTGTTTTATGAGACTTGTGTGACAGAACAGTACAAAAACATTTGATTGTAATTTTTGTTAGTTTTAATCATAATGCTATTCCAGTACAAATGTGTAAGGTAATAAATGTTTCAATTTT

Function

NR:

description
DCN1-like protein 1

GO: NA

KEGG:

id description
K17822 DCUN1D1_2; DCN1-like protein 1/2

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001160591.1 True 1387 mRNA 0.42 7 32263643 32267018

Neighbor

gene id symbol gene type direction distance location
ccdc39 ccdc39 coding downstream 213 32244116 ~ 32263430 (-)
LOC110508996 NA coding downstream 20058 32240882 ~ 32243585 (-)
LOC110508997 NA coding downstream 33385 32228406 ~ 32230258 (-)
LOC110508994 LOC106598832 coding downstream 61819 32191802 ~ 32201824 (-)
asip2b agrp2 coding downstream 76124 32062049 ~ 32187519 (-)
LOC110509000 b3gnt5 coding upstream 13885 32280903 ~ 32292193 (-)
LOC110509001 LOC106598815 coding upstream 45053 32312071 ~ 32332419 (-)
LOC110509003 LOC106598805 coding upstream 195166 32462184 ~ 32514866 (-)
cpdp LOC106598802 coding upstream 331410 32598428 ~ 32614539 (-)
LOC110509006 LOC106598799 coding upstream 361282 32628300 ~ 32655443 (-)
LOC110508982 NA non-coding downstream 234418 32023057 ~ 32029225 (-)
LOC110508978 NA non-coding downstream 248753 32001255 ~ 32014890 (-)
LOC110508977 NA non-coding downstream 300293 31958284 ~ 31967067 (-)
G2129021 NA non-coding upstream 689 32267707 ~ 32268032 (-)
G2129038 NA non-coding upstream 30175 32297193 ~ 32297394 (-)
G2129041 NA non-coding upstream 38281 32305299 ~ 32305562 (-)
G2129044 NA non-coding upstream 42392 32309410 ~ 32309627 (-)
G2129017 NA non-coding upstream 43858 32310876 ~ 32311370 (-)
G2128568 NA other downstream 380503 31882715 ~ 31883140 (-)
LOC110508968 LOC106598866 other downstream 526151 31708667 ~ 31761665 (-)
G2130393 NA other upstream 1131529 33398547 ~ 33399084 (-)
G2130771 LOC106598333 other upstream 1773188 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 1774420 34041438 ~ 34068073 (-)
LOC110509052 LOC106598333 other upstream 1774551 34038788 ~ 34058344 (-)
G2131621 NA other upstream 2218851 34485869 ~ 34486176 (-)

Expression


Co-expression Network