ro60 (trove2)


Basic Information

Item Value
gene id ro60
gene name trove2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 32919920 ~ 32937170 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966377.1
TGTCGGATTGGTACAACAAACAGGACGCCATGGGTCTGGCTCTGGCGGTGACCAAGTATAAAACGAGAGAGGGCTGGTCGCATCAGGATCTACTCAGACTCTCCCATGCCAAGCCTGCTAATGAAGTAAATACGTTATGAAAGGATGGAAGGAGGTCCAGGGGGCGTACGCCGACAAGGAGAACTCGGAGGAGGTGATCAAAGTCCTCTCATACCTGGAAGCGGTTGAGAAGGTCAAACACAGTGCAGACGAGATGGAGGTCAGCCATCTAATAGAGGAGCATAGTCTGGAGCGGGAACAACTTCTGACAGACCACCTGAGGTCCAAAGTGGTATGGAAGGCATTGTTAAAGGAGATGCCCATGGAGTCAATGCTAAGGACCCTGGGTAAGATGACCGCAGACCAAGTCCTGGAACCAGGAAGCTCAGACGTGGCAGAGGTGTGCGAGAGGATCCAGAGTGAGGCGGCTTTAAAGAAGGCAAAACTCCACCCTTTCAGCGTCTTGACAGCCTCGGAAAACTACAAAAGGGGCCAAGGCAACCGGGGAAAAGTGAAATGGGAACCAAACGTTGACATCATAAAAGCGCTGGACTCTGCTTTCTACAAATGTTTCACAAACGTGGAGCCGGCGGGGAAGCGCTTTGTGGTGGCGGTGGACATTAGCACATCACTGAGCAGCATCGTTAAGGGGACCTCCGTCAGCACAGCTGTAGCGGCTGCAGCCATGACCATGGTTTTTGCGCGGACGGAGGCAGAGACACAGGTTATGGCCTACTCTGAAGGAGCTATAGTTCCTTGCACCATCACTGAAGGCATGTCTCTTCGACAAGTAGCAACCGAGCTGGTCAAGATCCCCAGTGGTTATACAGACTGCGCTCTCCCCATCCTGTGGGCCTCGGAGAAGAGGATCACTGTGGACATGTTCATCATATTCACCAACAGTGCCTGCTGGCACGGCGAGGCCAATCCAACGGAGTGTCTGAGGATGTACAGACATAAAATGGGTATCTTCTCCAAACTTATGGTGTGTGGGTTGACCTCCAACGGCCTATCCATCGCTGACCCCGCCGAGGACAGGGGCATGTTGGACCTCTGCGGCTTTGACCTGGGAGCCATAGAGGTCATCCGTAACCTAGCCCTGGACCTGATCTGAGAACAGATTCTGGACAGTGCAAAGACGAGAAAGAAAAATATGGAGAGAATTGGTGGAAATACCTTGAAATGGATGTGGCTTGAAACGACGCAGAGAgcggatttttattttattttttaaagttgaTATTTACAATAACGATTTCTTCAATTTATCATAAATATCATGACCACAACAAAAATGATACGGTCTCCCTATTGGTCAtgttgagaggttagcatgtcttgggggtctGATGCATAATGTGCTTTCATTTCTAACCAGTAAAACATAGGAAAATACTCTCAAATAAAAAGTGACATCTGTACTTtttaggctcccgagtggcacagcctctccgtgctagaggtgtcactacagaccctggttagattccaggctgtatcacaatcggctgtgattgcgagtcccatagggcggtacacaattgtcccagcgtcgtctgggttagagtttggccggtgtaggccctcgttgcaaataagaatttgttcttaactgacttacccagttaaataaatcaaataaatactcACACCTCATATCTAACATTTGAGCTCAAATCCAAAATACTGGAGTATTGAGACAAAATTCAAAGTTTTAGCTTATGTAAGAAGGAATCCCTGTACACAATTACCACTGGAGGATGGCTCaaaaataatggctggaacaccGTTTGATACCATTTCACTGTTTACACTCCAGTTATTACTACACGCCTGTCCaccccaatgaaggtgccaccaatctcctttGCTATGTTATAGCAAGTTTGATGTGAACATGGAGCCCTTTTTATAATCTGTTCATTTTTCATCATTTAGCAAACTCACTTATCCTgtgtgacttacaggagcaaatCAACAGATATTTCTCTTAGTCTgttcagggattcaaaccagtgactttttggttactagcccaatgtgCTTAACCGCTAGGCAACCTGCCTCCCCTTGTCCCTTTTGTCTTCTTCAATTGGTCTAATCACTATATAGAAGACTAACCAACTTATTTTGTTTGATtgcagtatatatttttttgttttttttattaggTCAAACTCATAATAGAATAGACTTGGTGCACTTAAACATGTAACATGCGAATCCATTTAGTTTATTTTGCTTTGTCACAAGTCAAAACAAGGAAGTATTTGACGCCAAGAGATAAGGGAGTGACTGTCGTCATTGTCACTGGCAGTTTTTGGCAAACCTGCAAAATTGGTTTAttccctgggtcatgttcattagggcagaCGTTCGAAAAGGTTTTAAAATCTTGTacaatggaaaattaaaaatgaacATTTCAATTGCTTTTCTATTTGTTACGTAATGATCACGACCCTGGAATCTATTGATTTTATGCATTACCAATGGTTTTTTTCTATTGCTGTATCATGTTGTTGAAGGTCAAAACAAGGCCATTTAGTAGTGTGAAGACTGAAGCTGCTAGACGCACATTTAAAGTATTCCAGTGTCGGAGGTTTGTGATAAACAAGCACTAATGATAGAATGTCAGTTATACAAATACTCACTAATGTTCCATAGAAACTCACCAGCTACTTTTCCTTTGTAATAGATCCCACTGAATGTACCTTTTTGTCATACTTGTGTAACACtgtagatttttaaaatgctttattCTTCAAATATTGAATAAATAAAATGGGATAATACTGAAGATGCTTTACCTTTTAGCAGTCAATTCAATGGGGGAATGATGGCTGACGCTGAAATAGAGGAAGTGGAAAGTATTAACTGGTTTATTGAATTGTTATTTTCTGTCTTCTGTCATTTCAGATCAACCCTAATTTAGACAAAACAAATTCAGACCTGGTAACtgatttctaaaaacctttttactttgtgttgatttcatctgATCCAATATAAAAGTATGGCACAAAATATGTCAGTCTATTAAAAGGCCCCACCAGTTCTCGAGTTGGTCCCAACCCCATGAGTTGAGATAGAAGACCATCTTTGAGGACATCGGTTCGAACGTAGTTAACAAAACATGCTACATTTGAAAATGCTCTAGACTCTAATAATGCATACATTCTGAGGTAACAATACTTTGGAGTCAGTTGCTATAGTAGAGAATACAGTGGGGCACATTGACAGGTGGAGATAGAATGGCCACAGTCCATATTGATAGAGAAAGTTGAACTGAATCAATTATAAATGTAGGCCTTACTGTCCCATGACTAATCCATTTTCTCTTTCAACTGAAAGGTGATTTCAGTTCATGTTGCATGCCATTTACATTAGCCATAGTGTCAATACAAACCTTAATAAAGTGTTTCATGG
>XM_036966376.1
aggaGGGTTtgtccgagcgttctgacctcacaacggcagtcaagcacccaagttaACTGGTTAAAGTTGGCTACcttgccagctacttccagacataaatgagagaacacctcactctgaccattgttCTCGCACTAGCAGCGCTGTTTAGGCTGTGTTCTTGTTATATAGAGTGTTGGTGACTATAACTGTGcagctggcaacaattgaatagtttgttttttttgccgacgtttactgacaccgatcatattcaacgggtgttgcgCGTTCagaaattcatcagttattcggCACCCTGTCACACTCAGACGACAGCGCTCTAAATTCGGATTAGAtatccagagtgaatttacgaacgcacccaaaAAGGGATCCTTGCTGCCTGCATAACATCCTGATACTAGGAGAACGGTACTATTCATCGGTCTGTAGGGTTCCCCCAGTGACGCCCATACGACCTGCAAATCAACTATTAGCTACGTTATTAACTAGTCACAGGGTGTGTGTTTAGAGGAGCTATCACATGGAGCCATCGGGACAGGATGCCAACGACCACGGCCAAAACTCAGTTGGCGACGGTGAGCACCCATGGGAGGTAACAGACATGACCAGGCTCCGCCGCTTCATCTGCTACGGCTCAGAAATGGCCATCTATGACACCAAGGAGCACCGGCTGGGCATGGAGAGTGCCCTGGCTCTGCTCTCCCTGCTACAGGAGGGCAGGGGTTgcgaggtggtggaggaggtcaAAAGGCTGGCTCTGGAGGGCAGGCCAGTCAGGGCCAACCCTTCCCTGTTTGCCTTAGCTGTGTGCTCCCAACATTTGGACCTGAATACCAGACAGGGGGCGTTCCGAGCCCTGAGTGACGTGTGCCGGGCCCCCGAGCACCTCTTCACCTTCATCCAATACAAGAAGGAGGTGAAAGAGAGGATGCGGTGCGGGATATGGGGACGGGCCCTGAGGAAAGCGGTGTCGGATTGGTACAACAAACAGGACGCCATGGGTCTGGCTCTGGCGGTGACCAAGTATAAAACGAGAGAGGGCTGGTCGCATCAGGATCTACTCAGACTCTCCCATGCCAAGCCTGCTAATGAAGCGATCGTGTTGATCAGTAAATACGTTATGAAAGGATGGAAGGAGGTCCAGGGGGCGTACGCCGACAAGGAGAACTCGGAGGAGGTGATCAAAGTCCTCTCATACCTGGAAGCGGTTGAGAAGGTCAAACACAGTGCAGACGAGATGGAGGTCAGCCATCTAATAGAGGAGCATAGTCTGGAGCGGGAACAACTTCTGACAGACCACCTGAGGTCCAAAGTGGTATGGAAGGCATTGTTAAAGGAGATGCCCATGGAGTCAATGCTAAGGACCCTGGGTAAGATGACCGCAGACCAAGTCCTGGAACCAGGAAGCTCAGACGTGGCAGAGGTGTGCGAGAGGATCCAGAGTGAGGCGGCTTTAAAGAAGGCAAAACTCCACCCTTTCAGCGTCTTGACAGCCTCGGAAAACTACAAAAGGGGCCAAGGCAACCGGGGAAAAGTGAAATGGGAACCAAACGTTGACATCATAAAAGCGCTGGACTCTGCTTTCTACAAATGTTTCACAAACGTGGAGCCGGCGGGGAAGCGCTTTGTGGTGGCGGTGGACATTAGCACATCACTGAGCAGCATCGTTAAGGGGACCTCCGTCAGCACAGCTGTAGCGGCTGCAGCCATGACCATGGTTTTTGCGCGGACGGAGGCAGAGACACAGGTTATGGCCTACTCTGAAGGAGCTATAGTTCCTTGCACCATCACTGAAGGCATGTCTCTTCGACAAGTAGCAACCGAGCTGGTCAAGATCCCCAGTGGTTATACAGACTGCGCTCTCCCCATCCTGTGGGCCTCGGAGAAGAGGATCACTGTGGACATGTTCATCATATTCACCAACAGTGCCTGCTGGCACGGCGAGGCCAATCCAACGGAGTGTCTGAGGATGTACAGACATAAAATGGGTATCTTCTCCAAACTTATGGTGTGTGGGTTGACCTCCAACGGCCTATCCATCGCTGACCCCGCCGAGGACAGGGGCATGTTGGACCTCTGCGGCTTTGACCTGGGAGCCATAGAGGTCATCCGTAACCTAGCCCTGGACCTGATCTGAGAACAGATTCTGGACAGTGCAAAGACGAGAAAGAAAAATATGGAGAGAATTGGTGGAAATACCTTGAAATGGATGTGGCTTGAAACGACGCAGAGAgcggatttttattttattttttaaagttgaTATTTACAATAACGATTTCTTCAATTTATCATAAATATCATGACCACAACAAAAATGATACGGTCTCCCTATTGGTCAtgttgagaggttagcatgtcttgggggtctGATGCATAATGTGCTTTCATTTCTAACCAGTAAAACATAGGAAAATACTCTCAAATAAAAAGTGACATCTGTACTTtttaggctcccgagtggcacagcctctccgtgctagaggtgtcactacagaccctggttagattccaggctgtatcacaatcggctgtgattgcgagtcccatagggcggtacacaattgtcccagcgtcgtctgggttagagtttggccggtgtaggccctcgttgcaaataagaatttgttcttaactgacttacccagttaaataaatcaaataaatactcACACCTCATATCTAACATTTGAGCTCAAATCCAAAATACTGGAGTATTGAGACAAAATTCAAAGTTTTAGCTTATGTAAGAAGGAATCCCTGTACACAATTACCACTGGAGGATGGCTCaaaaataatggctggaacaccGTTTGATACCATTTCACTGTTTACACTCCAGTTATTACTACACGCCTGTCCaccccaatgaaggtgccaccaatctcctttGCTATGTTATAGCAAGTTTGATGTGAACATGGAGCCCTTTTTATAATCTGTTCATTTTTCATCATTTAGCAAACTCACTTATCCTgtgtgacttacaggagcaaatCAACAGATATTTCTCTTAGTCTgttcagggattcaaaccagtgactttttggttactagcccaatgtgCTTAACCGCTAGGCAACCTGCCTCCCCTTGTCCCTTTTGTCTTCTTCAATTGGTCTAATCACTATATAGAAGACTAACCAACTTATTTTGTTTGATtgcagtatatatttttttgttttttttattaggTCAAACTCATAATAGAATAGACTTGGTGCACTTAAACATGTAACATGCGAATCCATTTAGTTTATTTTGCTTTGTCACAAGTCAAAACAAGGAAGTATTTGACGCCAAGAGATAAGGGAGTGACTGTCGTCATTGTCACTGGCAGTTTTTGGCAAACCTGCAAAATTGGTTTAttccctgggtcatgttcattagggcagaCGTTCGAAAAGGTTTTAAAATCTTGTacaatggaaaattaaaaatgaacATTTCAATTGCTTTTCTATTTGTTACGTAATGATCACGACCCTGGAATCTATTGATTTTATGCATTACCAATGGTTTTTTTCTATTGCTGTATCATGTTGTTGAAGGTCAAAACAAGGCCATTTAGTAGTGTGAAGACTGAAGCTGCTAGACGCACATTTAAAGTATTCCAGTGTCGGAGGTTTGTGATAAACAAGCACTAATGATAGAATGTCAGTTATACAAATACTCACTAATGTTCCATAGAAACTCACCAGCTACTTTTCCTTTGTAATAGATCCCACTGAATGTACCTTTTTGTCATACTTGTGTAACACtgtagatttttaaaatgctttattCTTCAAATATTGAATAAATAAAATGGGATAATACTGAAGATGCTTTACCTTTTAGCAGTCAATTCAATGGGGGAATGATGGCTGACGCTGAAATAGAGGAAGTGGAAAGTATTAACTGGTTTATTGAATTGTTATTTTCTGTCTTCTGTCATTTCAGATCAACCCTAATTTAGACAAAACAAATTCAGACCTGGTAACtgatttctaaaaacctttttactttgtgttgatttcatctgATCCAATATAAAAGTATGGCACAAAATATGTCAGTCTATTAAAAGGCCCCACCAGTTCTCGAGTTGGTCCCAACCCCATGAGTTGAGATAGAAGACCATCTTTGAGGACATCGGTTCGAACGTAGTTAACAAAACATGCTACATTTGAAAATGCTCTAGACTCTAATAATGCATACATTCTGAGGTAACAATACTTTGGAGTCAGTTGCTATAGTAGAGAATACAGTGGGGCACATTGACAGGTGGAGATAGAATGGCCACAGTCCATATTGATAGAGAAAGTTGAACTGAATCAATTATAAATGTAGGCCTTACTGTCCCATGACTAATCCATTTTCTCTTTCAACTGAAAGGTGATTTCAGTTCATGTTGCATGCCATTTACATTAGCCATAGTGTCAATACAAACCTTAATAAAGTGTTTCATGG

Function

symbol description
trove2 60 kDa SS-A/Ro ribonucleoprotein

NR:

description
60 kDa SS-A/Ro ribonucleoprotein

GO: NA

KEGG:

id description
K11089 TROVE2, SSA2; 60 kDa SS-A/Ro ribonucleoprotein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966377.1 False 3468 mRNA 0.42 8 32919920 32932160
XM_036966376.1 True 4458 mRNA 0.45 9 32919920 32937170

Neighbor

gene id symbol gene type direction distance location
LOC110509019 cdc73 coding downstream 306 32875439 ~ 32919614 (-)
LOC110509015 LOC106597593 coding downstream 107896 32805525 ~ 32812024 (-)
LOC110509016 LOC106597593 coding downstream 116243 32798109 ~ 32803677 (-)
LOC118944826 LOC106597593 coding downstream 124194 32790153 ~ 32795726 (-)
LOC110509017 LOC106599177 coding downstream 131705 32785906 ~ 32788215 (-)
LOC110509023 LOC106598560 coding upstream 7372 32944542 ~ 32948512 (-)
rgs1 rgs1 coding upstream 17780 32954950 ~ 32957306 (-)
LOC110508225 LOC106598102 coding upstream 25326 32962496 ~ 32964152 (-)
rgs18 rgs18 coding upstream 31779 32968949 ~ 32973868 (-)
LOC118944830 NA coding upstream 212835 33150005 ~ 33153414 (-)
G2129961 NA non-coding downstream 47002 32870950 ~ 32872918 (-)
G2129964 NA non-coding downstream 84779 32830017 ~ 32835141 (-)
G2130089 NA non-coding downstream 92973 32826132 ~ 32826947 (-)
G2130088 NA non-coding downstream 94354 32824393 ~ 32825566 (-)
G2130086 NA non-coding downstream 97100 32822026 ~ 32822820 (-)
G2130162 NA non-coding upstream 76209 33013379 ~ 33019915 (-)
G2130229 NA non-coding upstream 168702 33105872 ~ 33107219 (-)
G2130236 NA non-coding upstream 183996 33121166 ~ 33121566 (-)
G2130241 NA non-coding upstream 194426 33131596 ~ 33131887 (-)
G2130258 NA non-coding upstream 230756 33167926 ~ 33168125 (-)
LOC110508997 NA other downstream 689706 32228406 ~ 32230258 (-)
asip2b agrp2 other downstream 754898 32062049 ~ 32187519 (-)
LOC110508982 NA other downstream 891362 32023057 ~ 32029225 (-)
G2128568 NA other downstream 1036780 31882715 ~ 31883140 (-)
LOC110508968 LOC106598866 other downstream 1182428 31708667 ~ 31761665 (-)
G2130393 NA other upstream 461377 33398547 ~ 33399084 (-)
G2130771 LOC106598333 other upstream 1103036 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 1104268 34041438 ~ 34068073 (-)
LOC110509052 LOC106598333 other upstream 1104399 34038788 ~ 34058344 (-)
G2131621 NA other upstream 1548699 34485869 ~ 34486176 (-)

Expression


Co-expression Network