LOC110509023 (LOC106598560)


Basic Information

Item Value
gene id LOC110509023
gene name LOC106598560
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 32944542 ~ 32948512 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589963.2
AGTGTAGATTTCCCCGTGATTATGGAGAAGAGCCAATCAGGATTGAGATGCCGGTAGAGCTTGGGTATTCTTGGCTTTGTCAGAGAGCATAAAGAATCCACCGAGCTTCCTTGAGAATTGGGTCTGGAAACTCAACGAACAGGGTTGAGAGGGTGATGTGTAGACAGTATTTAGCCATTGAACACAAATAATAATTACAAAAAAATGGATATTTGCTGTGAGACGGCCTCAGAAGACCTTGACAAGACCAAAAGGCTTTTGCATAAACCCTGGAAATCGAGATTCCACAACTTCCTCAATAGTCCCTCACCTCATTCAAGGAAAAAACTACACAGACAATCTGTTAATGAGGCGAAACAGTGGGGACAATCCTTAGAGAAAGTACTCAATCATAAATGTGGCCAAGTGGCATTTCGGGTATTCCTGAAATCTGAGTTCTGTGAGGAGAACCTGGAGTTTTGGCTTGCCTGTGAAGAATTCAAGTCCATCACCAGTCCAGAGAAGCTTGCCTGGAAAGCTACTAGCATTTATGAAgaattcatccaaagtgactcCCCTATGGAGGTCAACGTCGATTACCACACAAGAGACACGATTGCTCAGAGTCTCCACAAGCCAACCCCATCTTGTTTTGACGTTGCCCAGAGGAAGGTCTGTAGCCTTATGGAGAACGATGCGTATCCTCGGTTCATTCAGTCTGACTACTACAAGGACCTGTGTGCTGGTGGCAGGGGCTTAGGAAAACATAAAGTAACTTGAGACTGACTGACTCAGACTCCACAAAAATGTACTCTGGCAATCCAattctctgctcttctcttgaAGTGTGCACTTGACTTGAACACTCCCTCACATGGAATGGTTCACCTGATAAACAACCGACGAACGCTACTGACTTCAAGTGTCTGTGTTATTTGTATATATTGATGGTGATGTATATTTGTAAACTTGTAATATTTCATATTTAATAATTCCATTGTAAGTTGTACTTGTAATTCAGCTTGTTGCTATAACGATTTAttgaacatttaaaaataaaaaataaacatattcatgGATTTA

Function

NR:

description
regulator of G-protein signaling 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589963.2 True 1062 mRNA 0.41 5 32944542 32948512

Neighbor

gene id symbol gene type direction distance location
ro60 trove2 coding downstream 7372 32919920 ~ 32937170 (-)
LOC110509019 cdc73 coding downstream 24928 32875439 ~ 32919614 (-)
LOC110509015 LOC106597593 coding downstream 132518 32805525 ~ 32812024 (-)
LOC110509016 LOC106597593 coding downstream 140865 32798109 ~ 32803677 (-)
LOC118944826 LOC106597593 coding downstream 148816 32790153 ~ 32795726 (-)
rgs1 rgs1 coding upstream 6438 32954950 ~ 32957306 (-)
LOC110508225 LOC106598102 coding upstream 13984 32962496 ~ 32964152 (-)
rgs18 rgs18 coding upstream 20437 32968949 ~ 32973868 (-)
LOC118944830 NA coding upstream 201493 33150005 ~ 33153414 (-)
LOC110508227 LOC106598474 coding upstream 330042 33278554 ~ 33307293 (-)
G2129961 NA non-coding downstream 71624 32870950 ~ 32872918 (-)
G2129964 NA non-coding downstream 109401 32830017 ~ 32835141 (-)
G2130089 NA non-coding downstream 117595 32826132 ~ 32826947 (-)
G2130088 NA non-coding downstream 118976 32824393 ~ 32825566 (-)
G2130086 NA non-coding downstream 121722 32822026 ~ 32822820 (-)
G2130162 NA non-coding upstream 64867 33013379 ~ 33019915 (-)
G2130229 NA non-coding upstream 157360 33105872 ~ 33107219 (-)
G2130236 NA non-coding upstream 172654 33121166 ~ 33121566 (-)
G2130241 NA non-coding upstream 183084 33131596 ~ 33131887 (-)
G2130258 NA non-coding upstream 219414 33167926 ~ 33168125 (-)
LOC110508997 NA other downstream 714328 32228406 ~ 32230258 (-)
asip2b agrp2 other downstream 779520 32062049 ~ 32187519 (-)
LOC110508982 NA other downstream 915984 32023057 ~ 32029225 (-)
G2128568 NA other downstream 1061402 31882715 ~ 31883140 (-)
LOC110508968 LOC106598866 other downstream 1207050 31708667 ~ 31761665 (-)
G2130393 NA other upstream 450035 33398547 ~ 33399084 (-)
G2130771 LOC106598333 other upstream 1091694 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 1092926 34041438 ~ 34068073 (-)
LOC110509052 LOC106598333 other upstream 1093057 34038788 ~ 34058344 (-)
G2131621 NA other upstream 1537357 34485869 ~ 34486176 (-)

Expression


Co-expression Network