rgs1 (rgs1)


Basic Information

Item Value
gene id rgs1
gene name rgs1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 32954950 ~ 32957306 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001165154.2
AGATACACTTTGACAACTAACAGAGAACCACAACACTGAGTGCTACATACACAGAACCCAACTATTGTTCCCCCAAACATGCCTATCTCAGTCACGTCACCATCAAGGGAACTGCATTCACACAACATGGACATGGACGACAAGAGGAGAAATCAGACGAGGGGAAGCGACTTGAAATCCCGACTACAGCGCAGATCTTCCCAAACCCCCAACACTGAACGACTTAGCCCCGAGGAAATTATCCTGTGGTCCCAGTCTTTGGAGAGACTTCTCGCATCGAAATATGGCATGACAACATTTCAAGCCTTCCTGAAGTCGGAGTTCAGTGACGAGAACATTGAGTTCTGGCTGATCTGTCAAGACTACAAGAAGATCAAGTCGTCCTTCAGACTGTCCTCCAGGGCCAAGAAAATCTACAAGACATATATTGAAGCCGAGGCTCCAAAAGAGATCAACATTGACCACAAGACCAGAGATCTCATCAGGCGGAATGTGAAGACGCCCACCACAGTTTGCTTCGACGAGGCCCAGAGGATTGTGTACAGATTGATGGAGAAAGACTCCTACCCCAGGTTCCTCAGATCCAACATCTACAGGACCTTACTGGACTCTGCATCAGACTACATTAAGGTGTAAATGAATACCAACGGTAGAAACTGGACCGAGGCTTCCAACAATGGACCGCAATGTTAGACAGCCAAGAAGGGTTTGCAAATGGGATTCTTAAGAAGATGTTTCCAAATGTGAATTCTACTGGGTACAGAGATAACAGGCCAAAAGGAAACAGAACGTACAGAAGCGACTTTGAATCCTTATTGACATTTGTGTCTAGTAGTCTATGTGCTTCCACTTGAAAGATAAACACAACAGGGGCAGCAGcagctagtggttaagagcattgcgacagtaactgaaaagtcgctggtttgaatccctgagttgactaggtgatgtgcccttaagcaaggtgcttaaccctaattgctcctgtgagTCGCTCTGGGTAAGAGAGTCAGCTAAATTAATACAAATGTAAGTTAAACATATGATACATAGAAAAGGATTACATAGAACATAGAAATAGATTGTATTTCTATGACAGAGATGGGGTGCTGGGGGATTACCTGGCAGAGTATGTGATAGTTAGGGACTTTCTGTGTCTTGGGGGATGTTTTCAAGGATGCATATTATGTAGCATGTTAACAGCCAGAGCAGCAACTGCATGAGCAGGTATCTGCAGTTGATCAGTGGAGTTATTTGATGAGACATTAGATGGGATTATCTACTAAGTGTGTCTTTTAAAACCAATACAAGTTTAGAATAGGATATGTTTTTACTCTGACACCACGCCATGAGGCATGTAAGCTGAAAAACATTATAACATGTTGGAGAATTAATATGTGAAGGAatgacaatgtaaacatgttgttgttgcactgtatatatgtaaacATTTCCAACGTAATGAATGTATTTGTTTGCTAAATTAGGATATTACTGAATATAAATTCAAtaaaaacacatacatacattcacac

Function

symbol description
rgs1 Orthologous to human RGS1 (regulator of G protein signaling 1).

NR:

description
regulator of G-protein signaling 1

GO:

id name namespace
GO:0038032 termination of G protein-coupled receptor signaling pathway biological_process

KEGG:

id description
K16449 RGS; regulator of G-protein signaling

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001165154.2 True 1538 mRNA 0.42 5 32954950 32957306

Neighbor

gene id symbol gene type direction distance location
LOC110509023 LOC106598560 coding downstream 6438 32944542 ~ 32948512 (-)
ro60 trove2 coding downstream 17780 32919920 ~ 32937170 (-)
LOC110509019 cdc73 coding downstream 35336 32875439 ~ 32919614 (-)
LOC110509015 LOC106597593 coding downstream 142926 32805525 ~ 32812024 (-)
LOC110509016 LOC106597593 coding downstream 151273 32798109 ~ 32803677 (-)
LOC110508225 LOC106598102 coding upstream 5190 32962496 ~ 32964152 (-)
rgs18 rgs18 coding upstream 11643 32968949 ~ 32973868 (-)
LOC118944830 NA coding upstream 192699 33150005 ~ 33153414 (-)
LOC110508227 LOC106598474 coding upstream 321248 33278554 ~ 33307293 (-)
dynlt5 tctex1d1 coding upstream 352697 33310003 ~ 33313291 (-)
G2129961 NA non-coding downstream 82032 32870950 ~ 32872918 (-)
G2129964 NA non-coding downstream 119809 32830017 ~ 32835141 (-)
G2130089 NA non-coding downstream 128003 32826132 ~ 32826947 (-)
G2130088 NA non-coding downstream 129384 32824393 ~ 32825566 (-)
G2130086 NA non-coding downstream 132130 32822026 ~ 32822820 (-)
G2130162 NA non-coding upstream 56073 33013379 ~ 33019915 (-)
G2130229 NA non-coding upstream 148566 33105872 ~ 33107219 (-)
G2130236 NA non-coding upstream 163860 33121166 ~ 33121566 (-)
G2130241 NA non-coding upstream 174290 33131596 ~ 33131887 (-)
G2130258 NA non-coding upstream 210620 33167926 ~ 33168125 (-)
LOC110508997 NA other downstream 724736 32228406 ~ 32230258 (-)
asip2b agrp2 other downstream 789928 32062049 ~ 32187519 (-)
LOC110508982 NA other downstream 926392 32023057 ~ 32029225 (-)
G2128568 NA other downstream 1071810 31882715 ~ 31883140 (-)
LOC110508968 LOC106598866 other downstream 1217458 31708667 ~ 31761665 (-)
G2130393 NA other upstream 441241 33398547 ~ 33399084 (-)
G2130771 LOC106598333 other upstream 1082900 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 1084132 34041438 ~ 34068073 (-)
LOC110509052 LOC106598333 other upstream 1084263 34038788 ~ 34058344 (-)
G2131621 NA other upstream 1528563 34485869 ~ 34486176 (-)

Expression


Co-expression Network