LOC110508225 (LOC106598102)


Basic Information

Item Value
gene id LOC110508225
gene name LOC106598102
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 32962496 ~ 32964152 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021588655.2
ATGGATCTCAACACTCTTTTCAAGGGTAGATTTTGTTGCTTTCCCAAGGACCCGCTTGAAGAGGCTGAGACTTGGGGAGAGTCTGTGGACAAACTCCTGGGTTGTAAACCCGGGCAGGCGGCTTTCAGAGAATTCCTTAAATCAGAGTATAGTGAGGAGAATATTCTGTTTTGGCTGGCCTGTGAGGAGTACAAGAACATCACGTCTCTTCCAGAGATGATCTCATCTGCAAACAGGATCTACTCAGAGTTTGTGGAATGTGAAGCACCGAGACAGATCAATATTGATTGTGGGACCAGAGAAAATATCACCAAGAACATCTCTCAGCCGAGCCTGACCTCTTTCGACACGGCACAGAAGTTGATCTACAGTCTGATGGCCAGGGATTGTTACCCACGATTCCTCAAGTCAGACGTCTACCAGGATATGCTGAGGGGAGCAAGGTGA

Function

NR:

description
regulator of G-protein signaling 21-like

GO: NA

KEGG:

id description
K16449 RGS; regulator of G-protein signaling

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021588655.2 True 447 mRNA 0.48 3 32962496 32964152

Neighbor

gene id symbol gene type direction distance location
rgs1 rgs1 coding downstream 5190 32954950 ~ 32957306 (-)
LOC110509023 LOC106598560 coding downstream 13984 32944542 ~ 32948512 (-)
ro60 trove2 coding downstream 25326 32919920 ~ 32937170 (-)
LOC110509019 cdc73 coding downstream 42882 32875439 ~ 32919614 (-)
LOC110509015 LOC106597593 coding downstream 150472 32805525 ~ 32812024 (-)
rgs18 rgs18 coding upstream 4797 32968949 ~ 32973868 (-)
LOC118944830 NA coding upstream 185853 33150005 ~ 33153414 (-)
LOC110508227 LOC106598474 coding upstream 314402 33278554 ~ 33307293 (-)
dynlt5 tctex1d1 coding upstream 345851 33310003 ~ 33313291 (-)
LOC110509030 LOC106598456 coding upstream 349281 33313433 ~ 33381200 (-)
G2129961 NA non-coding downstream 89578 32870950 ~ 32872918 (-)
G2129964 NA non-coding downstream 127355 32830017 ~ 32835141 (-)
G2130089 NA non-coding downstream 135549 32826132 ~ 32826947 (-)
G2130088 NA non-coding downstream 136930 32824393 ~ 32825566 (-)
G2130086 NA non-coding downstream 139676 32822026 ~ 32822820 (-)
G2130162 NA non-coding upstream 49227 33013379 ~ 33019915 (-)
G2130229 NA non-coding upstream 141720 33105872 ~ 33107219 (-)
G2130236 NA non-coding upstream 157014 33121166 ~ 33121566 (-)
G2130241 NA non-coding upstream 167444 33131596 ~ 33131887 (-)
G2130258 NA non-coding upstream 203774 33167926 ~ 33168125 (-)
LOC110508997 NA other downstream 732282 32228406 ~ 32230258 (-)
asip2b agrp2 other downstream 797474 32062049 ~ 32187519 (-)
LOC110508982 NA other downstream 933938 32023057 ~ 32029225 (-)
G2128568 NA other downstream 1079356 31882715 ~ 31883140 (-)
LOC110508968 LOC106598866 other downstream 1225004 31708667 ~ 31761665 (-)
G2130393 NA other upstream 434395 33398547 ~ 33399084 (-)
G2130771 LOC106598333 other upstream 1076054 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 1077286 34041438 ~ 34068073 (-)
LOC110509052 LOC106598333 other upstream 1077417 34038788 ~ 34058344 (-)
G2131621 NA other upstream 1521717 34485869 ~ 34486176 (-)

Expression


Co-expression Network