LOC110509025 (LOC106598617)


Basic Information

Item Value
gene id LOC110509025
gene name LOC106598617
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 33124472 ~ 33126977 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966929.1
AGACCATGCTGAGAACCAGCTTCACTGCAGTGACAGAGCAATCATAGACTCTGAAGCTCTAGAATACTACAGACACTGTGAACAGCACAAAGGATCCCGTCTCATCGTCTCTCACCATGTGCATAGGACTGGAATCACTGCCTAGCACATGTCTGGAGAGGGCAAAGGAACTCAAAGCTCTCTTTGGAAGTTTCCTACAGAAGCCAGATCTGAGCATCATCGGTCACTCACACAAGACCGACAAACTAAGGTTAAATAAGAGTGAACCATTAAAATGGAAGGAGTCGTTTGAGAACCTGCTGTCCAACCAAAATGGACTGTGCTTGTTCCGTGCTTTCCTGGTGTCGGAGTTTAGCGAGGAGAACATAGCTTTCTACCTGGCCTGTGAAGACTACAGGATAACCAAGCCCTCCTCAAAGCTATCGGCTACAGCTAAGAAGATCTATGAGGAGTATGTCTGCAGTGATGCACCAAGAGAGGTCAACCTCGACCATGAGACCAAAGCCATCACCAAGAAGAATCTGGAACACCCCAGCCAGTCCTGTTTCAGCCTGGCCCAGGAGAAGATCTACGCCCTGATGGAGAAAGACTGCTACCCTCGCTTCCTCAAGTCCCCCACCTACCTGGAGATCAGTCGGCAGGTCAAATCCGGTTAAGACCATTTATGGCTTGTTAAGACTGGTTAAGGCTGGTTGAAGCTTGTTAAGACTGGTTAAGGCTGGTTGAGGCTTGTTAAGACTGGTTAAGGCCAACTTGCAGGTGGTGAATGAGACACGAAGAAGAAGTCCATGGGAGACATGCTGAAAAGGACACACTGGAAACCAGGTGGTCTCACTAGGGTCCTCCTCAGTGGAGGAAGGGTCCTGTGCTGCTGGGTCAAACGTATGGAGGGGGGGACTGAAGATGTATACTAGATTGAACTGGAAGTCAGTCGGAAGTTGACACTGGAAATCTTGTCTGTGGCCTAGGAAAGAAGGCCGCTCACTGTGAAGATTGGAGTATCGAAGTCTGTAAAAGAGGTCTGTGAAGATTGAGGTATCTAAGTCTGTAAAAGAGGTCTGTGAAGATTGAGGTATCTAAGTCTGTAGGTCTGTGAAGATTGAGGTATCTAAGTCTGTAGGTCTGTGAAGATTGAGGTATCTAAGTCTGTAGGTCTGTGAAGATTGAGGTATCTAAGTCTGTAGGTCTGTGAAGATTGAGGTATCTAAGTCTGTAGGTCTGTGAAGATTGAGGTATCTAAGTCTGTAGGTCTGTGAATATTGAGGTATCTAAGTCTGTAAAAGAGGTCTGTGAAGATTGAGGTATGGAAGTCTGTAAAAGGTGAACATGTGTCTTGAGGTCAAAGACACATGAAGAAGTTCATGGTCATGGCGTTTGAGCAGAAAGAACAATGTGATGGAAAAGGACTGCTTTGCACAATCACTGAGAAGGTGTTATAGTTTTGTATTGTCTGATGCCTGTCTATTTATTTGGGTATTTATTAGCAGTCATTTTGTTATAGAAATGTTATTGAAATGTTATTGAAATGTTTGTACTGTAGAGTGCACTGGACAGCACTGTCCTGTACCGTTCCACAACATTTTTTATATTTATGTGTACATTTTTTATACCCAGAACTCCTTATGTGAGAGGAAATTATTTGAATAAAATCGGAAACTATATAAAACAACA
>XR_005040280.1
AGACCATGCTGAGAACCAGCTTCACTGCAGTGACAGAGCAATCATAGACTCTGAAGCTCTAGAATACTACAGACACTGTGAACAGCACAAAGGATCCCGTCTCATCGTCTCTCACCATGTGCATAGGACTGGAATCACTGCCTAGCACATGTCTGGAGAGGGCAAAGGAACTCAAAGCTCTCTTTGGAAGTTTCCTACAGAAGCCAGATCTGAGCATCATCGGTCACTCACACAAGACCGACAAACTAAGGTTAAATAAGAGTGAACCATTAAAATGGAAGGAGTCGTTTGAGAACCTGCTGTCCAACCAAAATGGACTGTGCTTGTTCCGTGCTTTCCTGGTGTCGGAGTTTAGCGAGGAGAACATAGCTTTCTACCTGGCCTGTGAAGACTACAGGATAACCAAGCCCTCCTCAAAGCTATCGGCTACAGCTAAGAAGATCTATGAGGAGTATGTCTGCAGTGATGCACCAAGAGAGGTCAACCTCGACCATGAGACCAAAGCCATCACCAAGAAGAATCTGGAACACCCCAGCCAGTCCTGTTTCAGCCTGGCCCAGGAGAAGATCTACGCCCTGATGGAGAAAGACTGCTACCCTCGCTTCCTCAAGTCCCCCACCTACCTGGAGATCAGTCGGCAGGTCAAATCCGGTTAAGACCATTTATGGCTTGTTAAGACTGGTTAAGGCTGGTTGAAGCTTGTTAAGACTGGTTAAGGCTGGTTGAGGCTTGTTAAGACTGGTTAAGGCCAACTTGCAGGTGGTGAATGAGACACGAAGAAGAAGTCCATGGGAGACATGCTGAAAAGGACACACTGGAAACCAGGTGGTCTCACTAGGGTCCTCCTCAGTGGAGGAAGGGTCCTGTGCTGCTGGGTCAAACGTATGGAGGGGGGGACTGAAGATGTATACTAGATTGAACTGGAAGTCAGTCGGAAGTTGACACTGGAAATCTTGTCTGTGGCCTAGGAAAGAAGGCCGCTCACTGTGAAGATTGGAGTATCGAAGTCTGTAAAAGAGGTCTGTGAAGATTGAGGTATCTAAGTCTGTAAAAGAGGTCTGTGAAGATTGAGGTATCTAAGTCTGTAGGTCTGTGAAGATTGAGGTATCTAAGTCTGTAAAAGAGGTCTGTGAAGATTGAGGTATGGAAGTCTGTAAAAGGTGAACATGTGTCTTGAGGTCAAAGACACATGAAGAAGTTCATGGTCATGGCGTTTGAGCAGAAAGAACAATGTGATGGAAAAGGACTGCTTTGCACAATCACTGAGAAGGTGTTATAGTTTTGTATTGTCTGATGCCTGTCTATTTATTTGGGTATTTATTAGCAGTCATTTTGTTATAGAAATGTTATTGAAATGTTATTGAAATGTTTGTACTGTAGAGTGCACTGGACAGCACTGTCCTGTACCGTTCCACAACATTTTTTATATTTATGTGTACATTTTTTATACCCAGAACTCCTTATGTGAGAGGAAATTATTTGAATAAAATCGGAAACTATATAAAACAACA

Function

NR:

description
regulator of G-protein signaling 5-like

GO:

id name namespace
GO:0038032 termination of G protein-coupled receptor signaling pathway biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966929.1 False 1671 mRNA 0.44 5 33124472 33126977
XR_005040280.1 True 1511 mRNA 0.45 6 33124472 33126977

Neighbor

gene id symbol gene type direction distance location
LOC110509024 LOC106598521 coding upstream 54065 33050612 ~ 33070407 (+)
LOC110509022 b3galt2 coding upstream 212540 32872931 ~ 32911932 (+)
LOC110508224 kcnt2 coding upstream 288034 32814704 ~ 32836798 (+)
zbtb41 zbtb41 coding upstream 340183 32759166 ~ 32803922 (+)
LOC110509011 LOC106598790 coding upstream 405625 32710595 ~ 32718847 (+)
LOC110509026 LOC106598516 coding downstream 29664 33156641 ~ 33165714 (+)
LOC110508226 LOC106598614 coding downstream 49775 33176752 ~ 33212483 (+)
LOC118944857 LOC106568727 coding downstream 104545 33231522 ~ 33247262 (+)
LOC110509029 LOC106598504 coding downstream 121673 33248650 ~ 33274764 (+)
LOC118944861 NA coding downstream 386595 33513572 ~ 33520317 (+)
G2129530 NA non-coding upstream 18037 33105976 ~ 33106435 (+)
G2129522 NA non-coding upstream 31825 33091151 ~ 33092647 (+)
G2129429 rgs1 non-coding upstream 167095 32954952 ~ 32957377 (+)
G2129401 NA non-coding upstream 176554 32895331 ~ 32947918 (+)
G2129411 trove2 non-coding upstream 193849 32930072 ~ 32930623 (+)
G2129552 NA non-coding downstream 27581 33154558 ~ 33154799 (+)
G2129559 NA non-coding downstream 39141 33166118 ~ 33166591 (+)
G2129574 NA non-coding downstream 63021 33189998 ~ 33190204 (+)
G2129576 NA non-coding downstream 72429 33199406 ~ 33199752 (+)
G2129371 crb1 other upstream 374904 32748928 ~ 32749568 (+)
pfn2l LOC106598797 other upstream 423628 32631289 ~ 32700844 (+)
G2128753 NA other upstream 850092 32269318 ~ 32274380 (+)
G2129639 LOC106598496 other downstream 181121 33308098 ~ 33308991 (+)
G2129708 NA other downstream 304774 33431751 ~ 33432107 (+)
G2129724 LOC106598452 other downstream 325235 33452212 ~ 33452873 (+)
G2129765 LOC106598425 other downstream 445131 33572108 ~ 33575970 (+)
G2129859 NA other downstream 602171 33729148 ~ 33729528 (+)

Expression


Co-expression Network