dynlt5 (tctex1d1)


Basic Information

Item Value
gene id dynlt5
gene name tctex1d1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 33310003 ~ 33313291 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589972.2
ACAGAGTCCTTTTAAAAACCCGATGAATGCAGTTGGTGCAGGATAGGAAACCCCTCCTCCAAAACGGACGGTTGTCAGGACAACACAATGCGCTGGATCGCTACAATGTTTCTGCTTTGACTCGTGAATTCTGAATAGCTAGACAACAGGCAGAGTAATGTCTGATTTAGCTAAAGAAAAGGCAGCTCGTCTTCTGAAGAAGAGAGGTAGTGTGTCATCCCTTGGCAGCCATGATGTCAGAGCCAAGGAAACAGGGGGCAAGATCAAGGATTCTATAAGCACCGTATCCTATATCGATGAGCCTGGTCACCATGACGATAACCCTCGACCCGCAGTACAGATGGAGAACACCTTCCAATTGGCACCACTTAGACGCTTCCCTGTTCTCACGGTCAATGACATCCTGAAGGATGTGCTCGACAGTTACCTGCAAGAAGAGAAGTATGAAGCTGAGCTCTGTCGGCAGATGACAAAGACCATATCCGAGGTGATCAAAGCCAGGGTGAAGGATCTGATGGTTCCCCGTTATAAGATCATTGTTCTGATCAGCATCGGACAGCTCAGTGACCAGAACATGCGCATCGGGAGCCGCTGCCTGTGGGACTCCTCCAACGATACCTTCTCCTCACACTCCTTCAAGAACAGCTCTCTCTTCGCCGTGGCCAACGTCTACGCTGTTTACTTTGAGTGAGTCATCACCCATGGTCACAGATCACTGTCTTGGACTGTAGGTAATCAAGTCCTATATAGTCTTATGTAGTCTGTCATAAGGGCTACATAACAGTGTTATAAGCATGACATAATAgatttgattt

Function

NR:

description
tctex1 domain-containing protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589972.2 True 815 mRNA 0.47 5 33310003 33313291

Neighbor

gene id symbol gene type direction distance location
LOC110508227 LOC106598474 coding downstream 2710 33278554 ~ 33307293 (-)
LOC118944830 NA coding downstream 156589 33150005 ~ 33153414 (-)
rgs18 rgs18 coding downstream 336135 32968949 ~ 32973868 (-)
LOC110508225 LOC106598102 coding downstream 345851 32962496 ~ 32964152 (-)
rgs1 rgs1 coding downstream 352697 32954950 ~ 32957306 (-)
LOC110509030 LOC106598456 coding upstream 142 33313433 ~ 33381200 (-)
LOC110509034 LOC106598452 coding upstream 93382 33406673 ~ 33514461 (-)
LOC110509036 LOC106598444 coding upstream 205413 33518704 ~ 33526697 (-)
LOC110509037 LOC106598611 coding upstream 241726 33555017 ~ 33562140 (-)
LOC110508228 NA coding upstream 250644 33563935 ~ 33568603 (-)
G2130263 NA non-coding downstream 35248 33272894 ~ 33274755 (-)
G2130264 NA non-coding downstream 42808 33261645 ~ 33267195 (-)
G2130286 NA non-coding downstream 54027 33227158 ~ 33255976 (-)
G2130382 NA non-coding upstream 70514 33383805 ~ 33384077 (-)
G2130384 NA non-coding upstream 74237 33387528 ~ 33387751 (-)
G2130385 NA non-coding upstream 74741 33388032 ~ 33388359 (-)
G2130387 NA non-coding upstream 76741 33390032 ~ 33390255 (-)
G2130394 NA non-coding upstream 86444 33399735 ~ 33400010 (-)
LOC110508997 NA other downstream 1079789 32228406 ~ 32230258 (-)
asip2b agrp2 other downstream 1144981 32062049 ~ 32187519 (-)
LOC110508982 NA other downstream 1281445 32023057 ~ 32029225 (-)
G2128568 NA other downstream 1426863 31882715 ~ 31883140 (-)
LOC110508968 LOC106598866 other downstream 1572511 31708667 ~ 31761665 (-)
G2130393 NA other upstream 85256 33398547 ~ 33399084 (-)
G2130771 LOC106598333 other upstream 726915 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 728147 34041438 ~ 34068073 (-)
LOC110509052 LOC106598333 other upstream 728278 34038788 ~ 34058344 (-)
G2131621 NA other upstream 1172578 34485869 ~ 34486176 (-)

Expression


Co-expression Network