LOC110508228


Basic Information

Item Value
gene id LOC110508228
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 33563935 ~ 33568603 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110508228
ATGTGTGACCACAACAGAGATACTAACCTGAAAGACCTGTCATCTTGGCAGGTTGGTCAGCTCTTGATGGGTCATCACGGGATCATATCCACGCAGGCGGTTTCCTGGGTGATCAGGAAGTACAAGGCCATCGGCGGTATCATCCTCACTGCCAGTCACAACCCCCGGGGGATCCAATGGAGACTTTGGCATCAAGTTCAACACTGCTAATGGAGATACTGCCCAGGAGGCAGTCACTAACAAAATATCCCTGATCAGTAGATCCATAGAGGAGTACGCCATGTGCCCAGAACTCCGTGTAGACTTGGCTACCCCGGGCAAACAGATGTTTGACCTGGAGAACAAGTTTAAACCCTTCACAGTGGAGATAGTGGACTCGGCAGAGTCTTATGCCAACATGCCGAGGAACATCTTTCACTTTGCTGCACTGAAGGAGCTGTTGTCTGGCGAGAACCACATCAAGATCCGTCTAGAACGCCATGCATGGAGGTTAGGAATCTAGTGTGCCAGACATATCTGCACTGGGCTGGGCTCCCCTGCTAAATGTGCCATTAAGTATGTCCCCCTGGAAGACTTTGGGGGTCAGCACCCTGATACTAACCTCACCTATGCAGCCGACCTGGCTGAGGCCATGAGGGGTGGCCAGCaccattttggagctgcctttgATGGTGACGGGGTGGGTGTTCAATCAACAAATAATTTAACGGTCCTTTTAATAGAGGCTACGCGCGCAGCATGCCAACCAGCCCTGGACAACTAACACCTCGTGTGGCCAGAGCGATAAAGATTTAACTCTACGAGACCCCACGGGGTGGAAGTTCTTTGGCAACCTGATGGATGCAGGCAAATGGAGAAGAGAGTTTCGGGCACAGGTAGCTCATCAATGCTGACCATATCTGTGAGACGGATGGACTTTGGGCCACGCTGGCGTGGCTGTCCATCCTGGCAGAGAGGAAGCAGAGTGTGGATGACATCATGAAGGACCACTGGCAGAAGTTGGGCAGGAATGTCTTGGGCAGGTATGACTGTGAGGAAGTCCACCTGGATGCGGCCGTTCAGATGATGGAGGATCTGGAGCTGACTATGCTGGagaaggcaagtcaAGGTTCGCAGTTGGGTGAGAAGCTCTATCAGGTGGAGAGGGCCGACAACTTTGAACACACTGACCCCGTAGACAGGCACGTCTCCAGAAACCAGGGCTTGAGGATAATATTCACAGATGGCTCACGAGTCATCTACAGGCTCAGTGGAACAGGGAGTATGGGGGGAAACAGTGAAACAGTTTGGGTCTACATCGACAGCAACAAGACAGACCCCCAACAAGATCTTCgtgtgtatgtgtgcccccCCCTAACCATAGCCCTGAAGTTCTCACAGCTTCATGAGAGGACAGGCCGCACACACGATTGTCCCCTGCCACCCCCTGCCCCCTCCTAA

Function

NR:

description
PREDICTED: phosphoglucomutase-1-like

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110508228 True 1440 mRNA 0.53 11 33563935 33568603

Neighbor

gene id symbol gene type direction distance location
LOC110509037 LOC106598611 coding downstream 1795 33555017 ~ 33562140 (-)
LOC110509036 LOC106598444 coding downstream 37238 33518704 ~ 33526697 (-)
LOC110509034 LOC106598452 coding downstream 49474 33406673 ~ 33514461 (-)
LOC110509030 LOC106598456 coding downstream 182735 33313433 ~ 33381200 (-)
dynlt5 tctex1d1 coding downstream 250644 33310003 ~ 33313291 (-)
LOC110509038 LOC106598425 coding upstream 3507 33572110 ~ 33575991 (-)
trnav-cac-89 NA coding upstream 13957 33582560 ~ 33582632 (-)
LOC110508229 LOC106598404 coding upstream 57848 33626451 ~ 33797286 (-)
LOC118944832 LOC106598084 coding upstream 345747 33914350 ~ 33916205 (-)
LOC110509043 LOC106598366 coding upstream 385094 33953697 ~ 33972737 (-)
G2130462 NA non-coding downstream 9841 33552883 ~ 33554094 (-)
G2130409 NA non-coding downstream 130882 33432755 ~ 33433053 (-)
G2130404 NA non-coding downstream 137080 33426418 ~ 33426855 (-)
G2130398 NA non-coding downstream 150572 33412968 ~ 33413363 (-)
G2130476 NA non-coding upstream 9189 33577792 ~ 33578201 (-)
G2130484 NA non-coding upstream 25111 33593714 ~ 33594568 (-)
G2130506 NA non-coding upstream 63230 33631833 ~ 33632058 (-)
G2130508 NA non-coding upstream 66960 33635563 ~ 33635926 (-)
G2130514 NA non-coding upstream 80873 33649476 ~ 33649702 (-)
G2130393 NA other downstream 164851 33398547 ~ 33399084 (-)
LOC110508997 NA other downstream 1333721 32228406 ~ 32230258 (-)
asip2b agrp2 other downstream 1398913 32062049 ~ 32187519 (-)
LOC110508982 NA other downstream 1535377 32023057 ~ 32029225 (-)
G2128568 NA other downstream 1680795 31882715 ~ 31883140 (-)
G2130771 LOC106598333 other upstream 471603 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 472835 34041438 ~ 34068073 (-)
LOC110509052 LOC106598333 other upstream 472966 34038788 ~ 34058344 (-)
G2131621 NA other upstream 917266 34485869 ~ 34486176 (-)
G2131641 NA other upstream 947919 34516522 ~ 34518129 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_032936 pgm1 coding NC_007117.7 CM002890.2 32010183 ~ 32025225 (-)