Gene
RNA
| Item | Value |
|---|---|
| gene id | trnav-cac-89 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 33582560 ~ 33582632 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: interferon-induced protein 44-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnav-cac-89 | True | 73 | mRNA | 0.58 | 1 | 33582560 | 33582632 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509038 | LOC106598425 | coding | downstream | 6569 | 33572110 ~ 33575991 (-) |
| LOC110508228 | NA | coding | downstream | 13957 | 33563935 ~ 33568603 (-) |
| LOC110509037 | LOC106598611 | coding | downstream | 20420 | 33555017 ~ 33562140 (-) |
| LOC110509036 | LOC106598444 | coding | downstream | 55863 | 33518704 ~ 33526697 (-) |
| LOC110509034 | LOC106598452 | coding | downstream | 68099 | 33406673 ~ 33514461 (-) |
| LOC110508229 | LOC106598404 | coding | upstream | 43819 | 33626451 ~ 33797286 (-) |
| LOC118944832 | LOC106598084 | coding | upstream | 331718 | 33914350 ~ 33916205 (-) |
| LOC110509043 | LOC106598366 | coding | upstream | 371065 | 33953697 ~ 33972737 (-) |
| LOC110509045 | LOC106598354 | coding | upstream | 394944 | 33977576 ~ 33990790 (-) |
| LOC110509046 | LOC106598598 | coding | upstream | 414459 | 33997091 ~ 34000856 (-) |
| G2130476 | NA | non-coding | downstream | 4359 | 33577792 ~ 33578201 (-) |
| G2130462 | NA | non-coding | downstream | 28466 | 33552883 ~ 33554094 (-) |
| G2130409 | NA | non-coding | downstream | 149507 | 33432755 ~ 33433053 (-) |
| G2130404 | NA | non-coding | downstream | 155705 | 33426418 ~ 33426855 (-) |
| G2130484 | NA | non-coding | upstream | 11082 | 33593714 ~ 33594568 (-) |
| G2130506 | NA | non-coding | upstream | 49201 | 33631833 ~ 33632058 (-) |
| G2130508 | NA | non-coding | upstream | 52931 | 33635563 ~ 33635926 (-) |
| G2130514 | NA | non-coding | upstream | 66844 | 33649476 ~ 33649702 (-) |
| G2130519 | NA | non-coding | upstream | 74744 | 33657376 ~ 33657608 (-) |
| G2130393 | NA | other | downstream | 183476 | 33398547 ~ 33399084 (-) |
| LOC110508997 | NA | other | downstream | 1352346 | 32228406 ~ 32230258 (-) |
| asip2b | agrp2 | other | downstream | 1417538 | 32062049 ~ 32187519 (-) |
| LOC110508982 | NA | other | downstream | 1554002 | 32023057 ~ 32029225 (-) |
| G2128568 | NA | other | downstream | 1699420 | 31882715 ~ 31883140 (-) |
| G2130771 | LOC106598333 | other | upstream | 457574 | 34040206 ~ 34066665 (-) |
| G2130780 | LOC106598333 | other | upstream | 458806 | 34041438 ~ 34068073 (-) |
| LOC110509052 | LOC106598333 | other | upstream | 458937 | 34038788 ~ 34058344 (-) |
| G2131621 | NA | other | upstream | 903237 | 34485869 ~ 34486176 (-) |
| G2131641 | NA | other | upstream | 933890 | 34516522 ~ 34518129 (-) |
