LOC118944872


Basic Information

Item Value
gene id LOC118944872
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 34247945 ~ 34250438 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005040274.1
TTTCCATTATtagaacccactgggcacacacctggttgaatcaacattgtttctgtGTAATTTGAACGAAATTAccttgaaccaacgtggaatagacgttgaattgacgtctgtgcacAGTGGGAAAGGGCAGCAGAGCGGACAAAGACAGGACGCCACAAAGAAAAAAAATAGACACGGCTATCTGTTGGCTTGCTGTAGAAATCAGGATGCACTCGACTAAAAGTCGTATTTCGGGAGTGAGGTTCATGTGTACTGGATCATGGTCTGTGTGTGCACGGAGGGAAAAGGCATGAGGTGTGACTGGATTTCCAGTTCAAAAAGGTGCCATGGCACTGTCTGTTTTTGTTTATTGTCAAGCATTGTAATCG
>XR_005040273.1
TTTCCATTATtagaacccactgggcacacacctggttgaatcaacattgtttctgtGTAATTTGAACGAAATTAccttgaaccaacgtggaatagacgttgaattgacgtctgtgcacAGTGGGAAAGGGCAGCAGAGCGGACAAAGACAGGACGCCACAAAGAAAAAAAATAGACACGGCTATCTGTTGGCTTGCTGTAGAAATCAGGATGCACTCGACTAAAAGTCGTATTTCGGGAGTGAGGTGAGAGCCTTCTCTTGGTTACGGGTTCATGTGTACTGGATCATGGTCTGTGTGTGCACGGAGGGAAAAGGCATGAGGTGTGACTGGATTTCCAGTTCAAAAAGGTGCCATGGCACTGTCTGTTTTTGTTTATTGTCAAGCATTG

Function

NR:

description
PREDICTED: GTP:AMP phosphotransferase AK3, mitochondrial-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005040274.1 False 371 mRNA 0.44 3 34247945 34250438
XR_005040273.1 True 389 mRNA 0.45 3 34247951 34250438

Neighbor

gene id symbol gene type direction distance location
LOC110509051 LOC106598333 coding downstream 172801 34065539 ~ 34075144 (-)
LOC110509052 LOC106598333 coding downstream 189601 34038788 ~ 34058344 (-)
LOC110509046 LOC106598598 coding downstream 247089 33997091 ~ 34000856 (-)
LOC110509045 LOC106598354 coding downstream 257155 33977576 ~ 33990790 (-)
LOC110509043 LOC106598366 coding downstream 275208 33953697 ~ 33972737 (-)
zgc:110366 LOC105007548 coding upstream 7757 34258195 ~ 34269017 (-)
vcam1a LOC106598299 coding upstream 33830 34284268 ~ 34300628 (-)
LOC110509056 LOC106598260 coding upstream 54268 34304706 ~ 34321590 (-)
LOC110509050 LOC106598248 coding upstream 171734 34422172 ~ 34481859 (-)
LOC110508232 NA coding upstream 321595 34572033 ~ 34604132 (-)
G2131194 NA non-coding downstream 6332 34241381 ~ 34241613 (-)
G2131151 NA non-coding downstream 39985 34142058 ~ 34207960 (-)
G2131161 NA non-coding downstream 74846 34169351 ~ 34173099 (-)
G2131112 NA non-coding downstream 153815 34093544 ~ 34094130 (-)
G2130775 NA non-coding downstream 209275 34037063 ~ 34038670 (-)
G2131200 LOC106598276 non-coding upstream 1489 34251927 ~ 34252855 (-)
G2131203 LOC106598276 non-coding upstream 4169 34254607 ~ 34255349 (-)
G2131204 NA non-coding upstream 10115 34260553 ~ 34261277 (-)
G2131210 NA non-coding upstream 11337 34261775 ~ 34262390 (-)
G2131211 NA non-coding upstream 13384 34263822 ~ 34265601 (-)
G2130780 LOC106598333 other downstream 179872 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 181280 34040206 ~ 34066665 (-)
G2130393 NA other downstream 848861 33398547 ~ 33399084 (-)
LOC110508997 NA other downstream 2017731 32228406 ~ 32230258 (-)
G2131621 NA other upstream 235431 34485869 ~ 34486176 (-)
G2131641 NA other upstream 266084 34516522 ~ 34518129 (-)
lyrm4 lyrm4 other upstream 1755051 36005489 ~ 36017873 (-)
LOC118944844 riok1 other upstream 1773342 36023714 ~ 36025735 (-)
G2132971 NA other upstream 1973775 36224213 ~ 36225379 (-)

Expression


Co-expression Network