zgc:110366 (LOC105007548)


Basic Information

Item Value
gene id zgc:110366
gene name LOC105007548
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 34258195 ~ 34269017 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036967153.1
AAATTGGATTCTAGCGGCACCCCGGAAACGTCCTATTGAATATAATAAAACGCATTAGTTGGTTTTACAAGTCACAGTTGAACAAACATGAATTCTATTGTAACGACTTGTCCTAAAGTTTCTCTTTCCAATGGCCTGCAAATTCCAATTCTTGGACTGGGagtgcagatgaaggagaagATGATTCTAAGGAGAGTGAAACACCTCAGACTATTGAGATGGCCCCATTGAAAGGAAGAAGTTTGAAATTCATACCAGTAATTCTAAAATCAGGGAAAGTTTGAAATTCATACCAGTAATTCTAAAATCAGGGAAAGTTTGAAATTCATACCAGTAATTCTAAATCAGGGAACGTTTGAAATTCATACCTGAAATTCTAAATCAGGGAAAGTGATGTATCTTTCTTTTCTTCCCAAGGAACATCACATGACGGCGGGTATTCACATGACGCCATGTTGTATGCACTCCGCGAGTGTGGCGTGCGGCACATCGACACAGCGAAGCGTTACGGCTGTGAGGAGCAGCTGAGTATAGCCGTGCAGGAGAGCGGAGTACCGCGGCAAGACCTATGGCTTACAACCAAACTGTGGCCCGGAGAATACGGCTATACCGCTTCCAAAAAGGCCTGCCGCGACTCGTGTTCCCGCCTAGGGGTGGAATACCTTGATTTGTACCTGATGCACTGGCCAGATGCCATGGTCCCAGGAAGGTCCAATAGGGAGGTCAGGGTGGAGACTTGGAGGGCCTTGGAGGAGCTGTATAATGAAGGCGTGTGTCGTGCCATCGGCGTGAGTAATTTCCTCGTCTCCCATCTGAAGGAGCTGAAGGAGGACTGTAGTGTGGTGCCTCACGTCAACCAGGTGGAGTACCACCCGTTCCAGCAGCCAGAGGAGCTGGTGGAGTACTGTCGCCAGGAGGGCATCGTGTTCGAGGGCTATTGCCCCCTGGCCAAGGGTCAAGCTCTCAGCCACCCCACCATCCTCCAGCTGGCACACAAGTACGCCCGCACGCCCTCTCAGATCTGCATCCGGTGGAGCGTACAGAATGGAGTTGTCACCATTCCCAAGTCCACCAAAAACGAGAGGATCCTGGAAAACTGTCAAGTCTTTGGGTTCTCCCTCTCAGTTGAGGACGTGGATCGCGTCAGGAGACTCCACAGTGACATGAAGCTCATTCATCTCAGCTGGCCACTCTGGAAAGGATTATCGtcttaaataaaatacaaaacttTTAGAGATGa
>XM_036967154.1
ACGACGTATTTGGAAAATTGGATTCTAGCGGCACCCCGGAAACGTCCTATTGAATATAATAAAACGCATTAGTTGGTTTTACAAGTCACAGTTGAACAAACATGAATTCTATTGTAACGACTTGTCCTAAAGTTTCTCTTTCCAATGGCCTGCAAATTCCAATTCTTGGACTGGGagtgcagatgaaggagaagATGATTCTAAGGAGAGTGAAACACCTCAGACTATTGAGATGGCCCCATTGAAAGGAAGAAGTTTGAAATTCATACCAGTAATTCTAAAATCAGGGAAAGTTTGAAATTCATACCAGTAATTCTAAAATCAGGGAAAGTTTGAAATTCATACCTGAAATTCTAAATCAGGGAAAGTGATGTATCTTTCTTTTCTTCCCAAGGAACATCACATGACGGCGGGTATTCACATGACGCCATGTTGTATGCACTCCGCGAGTGTGGCGTGCGGCACATCGACACAGCGAAGCGTTACGGCTGTGAGGAGCAGCTGAGTATAGCCGTGCAGGAGAGCGGAGTACCGCGGCAAGACCTATGGCTTACAACCAAACTGTGGCCCGGAGAATACGGCTATACCGCTTCCAAAAAGGCCTGCCGCGACTCGTGTTCCCGCCTAGGGGTGGAATACCTTGATTTGTACCTGATGCACTGGCCAGATGCCATGGTCCCAGGAAGGTCCAATAGGGAGGTCAGGGTGGAGACTTGGAGGGCCTTGGAGGAGCTGTATAATGAAGGCGTGTGTCGTGCCATCGGCGTGAGTAATTTCCTCGTCTCCCATCTGAAGGAGCTGAAGGAGGACTGTAGTGTGGTGCCTCACGTCAACCAGGTGGAGTACCACCCGTTCCAGCAGCCAGAGGAGCTGGTGGAGTACTGTCGCCAGGAGGGCATCGTGTTCGAGGGCTATTGCCCCCTGGCCAAGGGTCAAGCTCTCAGCCACCCCACCATCCTCCAGCTGGCACACAAGTACGCCCGCACGCCCTCTCAGATCTGCATCCGGTGGAGCGTACAGAATGGAGTTGTCACCATTCCCAAGTCCACCAAAAACGAGAGGATCCTGGAAAACTGTCAAGTCTTTGGGTTCTCCCTCTCAGTTGAGGACGTGGATCGCGTCAGGAGACTCCACAGTGACATGAAGCTCATTCATCTCAGCTGGCCACTCTGGAAAGGATTATCGtcttaaataaaatacaaaacttTTAGAGATGa
>XM_021590015.2
GTTTTCGCCGCAAGGCTTTTAGTTTTACGACGTATTTGGAAAATTGGATTCTAGCGGCACCCCGGAAACGTCCTATTGAATATAATAAAACGCATTAGTTGGTTTTACAAGTCACAGTTGAACAAACATGAATTCTATTGTAACGACTTGTCCTAAAGTTTCTCTTTCCAATGGCCTGCAAATTCCAATTCTTGGACTGGGAACATCACATGACGGCGGGTATTCACATGACGCCATGTTGTATGCACTCCGCGAGTGTGGCGTGCGGCACATCGACACAGCGAAGCGTTACGGCTGTGAGGAGCAGCTGAGTATAGCCGTGCAGGAGAGCGGAGTACCGCGGCAAGACCTATGGCTTACAACCAAACTGTGGCCCGGAGAATACGGCTATACCGCTTCCAAAAAGGCCTGCCGCGACTCGTGTTCCCGCCTAGGGGTGGAATACCTTGATTTGTACCTGATGCACTGGCCAGATGCCATGGTCCCAGGAAGGTCCAATAGGGAGGTCAGGGTGGAGACTTGGAGGGCCTTGGAGGAGCTGTATAATGAAGGCGTGTGTCGTGCCATCGGCGTGAGTAATTTCCTCGTCTCCCATCTGAAGGAGCTGAAGGAGGACTGTAGTGTGGTGCCTCACGTCAACCAGGTGGAGTACCACCCGTTCCAGCAGCCAGAGGAGCTGGTGGAGTACTGTCGCCAGGAGGGCATCGTGTTCGAGGGCTATTGCCCCCTGGCCAAGGGTCAAGCTCTCAGCCACCCCACCATCCTCCAGCTGGCACACAAGTACGCCCGCACGCCCTCTCAGATCTGCATCCGGTGGAGCGTACAGAATGGAGTTGTCACCATTCCCAAGTCCACCAAAAACGAGAGGATCCTGGAAAACTGTCAAGTCTTTGGGTTCTCCCTCTCAGTTGAGGACGTGGATCGCGTCAGGAGACTCCACAGTGACATGAAGCTCATTCATCTCAGCTGGCCACTCTGGAAAGGATTATCGtcttaaataaaatacaaaacttTTAGAGATGa
>XM_036967152.1
GTTTTCGCCGCAAGGCTTTTAGTTTTACGACGTATTTGGAAAATTGGATTCTAGCGGCACCCCGGAAACGTCCTATTGAATATAATAAAACGCATTAGTTGGTTTTACAAGTCACAGTTGAACAAACATGAATTCTATTGTAACGACTTGTCCTAAAGTTTCTCTTTCCAATGGCCTGCAAATTCCAATTCTTGGACTGGGAACATCACATGACGGCGGGTATTCACATGACGCCATGTTGTATGCACTCCGCGAGTGTGGCGTGCGGCACATCGACACAGCGAAGCGTTACGGCTGTGAGGAGCAGCTGAGTATAGCCGTGCAGGAGAGCGGAGTACCGCGGCAAGACCTATGGCTTACAACCAAACTGTGGCCCGGAGAATACGGCTATACCGCTTCCAAAAAGGCCTGCCGCGACTCGTGTTCCCGCCTAGGGGTGGAATACCTTGATTTGTACCTGATGCACTGGCCAGATGCCATGGTCCCAGGAAGGTCCAATAGGGAGGTCAGGGTGGAGACTTGGAGGGCCTTGGAGGAGCTGTATAATGAAGGCGTGTGTCGTGCCATCGGCGTGAGTAATTTCCTCGTCTCCCATCTGAAGGAGCTGAAGGAGGACTGTAGTGTGGTGCCTCACGTCAACCAGGTGGAGTACCACCCGTTCCAGCAGCCAGAGGAGCTGGTGGAGTACTGTCGCCAGGAGGGCATCGTGTTCGAGGGCTATTGCCCCCTGGCCAAGGGTCAAGCTCTCAGCCACCCCACCATCCTCCAGCTGGCACACAAGTACGCCCGCACGCCCTCTCAGATCTGCATCCGGTGGAGCGTACAGAATGGAGTTGTCACCATTCCCAAGTCCACCAAAAACGAGAGGATCCTGGAAAACTGTCAAGTCTTTGGGTTCCAACTGGAGGGGAAAGACATGGAGGCATTGGGTCTTTGGGTTCTCCCTCTCAGTTGAGGACGTGGATCGCGTCAGGAGACTCCACAGTGACATGAAGCTCATTCATCTCAGCTGGCCACTCTGGAAAGGATTATCGtcttaaataaaatacaaaacttTTAGAGATGa
>XM_021590014.2
GTTTTCGCCGCAAGGCTTTTAGTTTTACGACGTATTTGGAAAATTGGATTCTAGCGGCACCCCGGAAACGTCCTATTGAATATAATAAAACGCATTAGTTGGTTTTACAAGTCACAGTTGAACAAACATGAATTCTATTGTAACGACTTGTCCTAAAGTTTCTCTTTCCAATGGCCTGCAAATTCCAATTCTTGGACTGGGAACATCACATGACGGCGGGTATTCACATGACGCCATGTTGTATGCACTCCGCGAGTGTGGCGTGCGGCACATCGACACAGCGAAGCGTTACGGCTGTGAGGAGCAGCTGAGTATAGCCGTGCAGGAGAGCGGAGTACCGCGGCAAGACCTATGGCTTACAACCAAACTGTGGCCCGGAGAATACGGCTATACCGCTTCCAAAAAGGCCTGCCGCGACTCGTGTTCCCGCCTAGGGGTGGAATACCTTGATTTGTACCTGATGCACTGGCCAGATGCCATGGTCCCAGGAAGGTCCAATAGGGAGGTCAGGGTGGAGACTTGGAGGGCCTTGGAGGAGCTGTATAATGAAGGCGTGTGTCGTGCCATCGGCGTGAGTAATTTCCTCGTCTCCCATCTGAAGGAGCTGAAGGAGGACTGTAGTGTGGTGCCTCACGTCAACCAGGTGGAGTACCACCCGTTCCAGCAGCCAGAGGAGCTGGTGGAGTACTGTCGCCAGGAGGGCATCGTGTTCGAGGGCTATTGCCCCCTGGCCAAGGGTCAAGCTCTCAGCCACCCCACCATCCTCCAGCTGGCACACAAGTACGCCCGCACGCCCTCTCAGATCTGCATCCGGTGGAGCGTACAGAATGGAGTTGTCACCATTCCCAAGTCCACCAAAAACGAGAGGATCCTGGAAAACTGTCAAGTCTTTGGGTTCCAACTGGAGGGGAAAGACATGGAGGCATTGGGCAAGTTGCATGATGGGAGACACGTGAGCTGGGATCCCACATGTGTGGAGTGACAGGTCTTTGGGTTCTCCCTCTCAGTTGAGGACGTGGATCGCGTCAGGAGACTCCACAGTGACATGAAGCTCATTCATCTCAGCTGGCCACTCTGGAAAGGATTATCGtcttaaataaaatacaaaacttTTAGA

Function

NR:

description
uncharacterized oxidoreductase ZK1290.5-like isoform X1

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K23257 yvgN; methylglyoxal/glyoxal reductase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036967153.1 False 1240 mRNA 0.49 7 34258195 34268977
XM_036967154.1 False 1217 mRNA 0.49 8 34258195 34268991
XM_021590015.2 False 1023 mRNA 0.52 7 34258195 34269017
XM_036967152.1 False 1066 mRNA 0.52 8 34258195 34269017
XM_021590014.2 True 1117 mRNA 0.52 8 34258200 34269017

Neighbor

gene id symbol gene type direction distance location
LOC118944872 NA coding downstream 7757 34247945 ~ 34250438 (-)
LOC110509051 LOC106598333 coding downstream 183051 34065539 ~ 34075144 (-)
LOC110509052 LOC106598333 coding downstream 199851 34038788 ~ 34058344 (-)
LOC110509046 LOC106598598 coding downstream 257339 33997091 ~ 34000856 (-)
LOC110509045 LOC106598354 coding downstream 267405 33977576 ~ 33990790 (-)
vcam1a LOC106598299 coding upstream 15251 34284268 ~ 34300628 (-)
LOC110509056 LOC106598260 coding upstream 35689 34304706 ~ 34321590 (-)
LOC110509050 LOC106598248 coding upstream 153155 34422172 ~ 34481859 (-)
LOC110508232 NA coding upstream 303016 34572033 ~ 34604132 (-)
LOC110509072 atp1b3 coding upstream 444250 34713267 ~ 34728197 (-)
G2131203 LOC106598276 non-coding downstream 2846 34254607 ~ 34255349 (-)
G2131200 LOC106598276 non-coding downstream 5340 34251927 ~ 34252855 (-)
G2131194 NA non-coding downstream 16582 34241381 ~ 34241613 (-)
G2131151 NA non-coding downstream 50235 34142058 ~ 34207960 (-)
G2131161 NA non-coding downstream 85096 34169351 ~ 34173099 (-)
G2131215 NA non-coding upstream 10144 34279161 ~ 34279491 (-)
G2131216 NA non-coding upstream 12079 34281096 ~ 34281305 (-)
G2131219 NA non-coding upstream 14816 34283833 ~ 34284032 (-)
G2131234 NA non-coding upstream 52884 34321901 ~ 34322185 (-)
G2130780 LOC106598333 other downstream 190122 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 191530 34040206 ~ 34066665 (-)
G2130393 NA other downstream 859111 33398547 ~ 33399084 (-)
LOC110508997 NA other downstream 2027981 32228406 ~ 32230258 (-)
G2131621 NA other upstream 216852 34485869 ~ 34486176 (-)
G2131641 NA other upstream 247505 34516522 ~ 34518129 (-)
lyrm4 lyrm4 other upstream 1736472 36005489 ~ 36017873 (-)
LOC118944844 riok1 other upstream 1754763 36023714 ~ 36025735 (-)
G2132971 NA other upstream 1955196 36224213 ~ 36225379 (-)

Expression


Co-expression Network