LOC110508232


Basic Information

Item Value
gene id LOC110508232
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 34572033 ~ 34604132 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966882.1
tctatgtgtgtgatgctggtagggtctgtctatgtgtgtgatgCTGGTAGGGTCTGTCAATGTGTGTGATGCTGGTAgggtctgtccatgtgtgtgatgctggtagggtctgtctatgtgtgtgatgCTGGTAGGGTCTATCCATGTGTGTGATGCTGGTAGGGTCTGTCCATGTGTGGGTGATGATGGTAGGGTCTGTCGATGTGTGTGATGCTGGTAGGGTCTGTCGATGTGTGTGATGCTGGTAgggtctgtccatgtgtgtgatgctggtagggtctgtccatgtgtgtgatgctggtagggtctgtccatgtgtgtgcaGATGAGTGTAAAGCTGGCTCCTGGGTTGGAGTATAGCATTGTTTGGACAGGGGCCTTGGGTCTCTCTGGCTACCCAGGGGAGGGAGCACTGGCCTGGGCATCGACAGGCCTCGCTACCCCCTGTCACCGCCTTGGCCCTGGAGGACTCCTTTGAGCAAGCCCAGCTGTTGGGAGCGTACAATGGCTACTGGGCTTCCCTGTGGATTGAAGTGGCTTTCTGTACACGTGCTCCGAGATCTGTCTGAGTTGTTCTGCGTCTCGCACTGGACCCACCTGGAGAACATTGCTTTGGCCCTCCTCAAGCCAGCAGGGACACAGCTCTACTAAGGTTGTCGGATCGCTTGTAAAGAATGATGAGCTCCAAACAGGAAGAAACTCTGAGGTTTGTCCAGTATGTTGAAGATAGTGGACTAAGAGCCTACAGCGGGCTGGTCTCTCAGAACCTGGATGTTGAAGATAGTGGACTAGGAACCTACAACGGGCTGGTCTCCCAGAAACTGGATGTTGAAGATAGTGGACTAGGAACCTACAACGGGCTGGTCTCCCAGAAACTGGATGTTGAAGATAGTGGACTAGGAACCTACAACGGGCTGGTCTCCCAGAACCTGGACCACGGCAGGAATGAGAGGAACAGGATTTACCTACAGGAGAAACAGGACAAGAAGAGAAAACAGGAAGAAGCCATAAAAAGgatggGCGAAGAGGTGGTGACCGAGGAGAAGCACCTGCACATGGGCTCCATGACCATGCCAGCCCCCCCGCAGCTTGCTTGCGGGCCGGGCTTTGCCGTGCGCTCCCAGTCACTACACTCGGTGGGCGGGGGCAGtaacgatggtggggaggaggagatgggcaGCCCTACCTCCCGTAAGCAGCCCCCACCCAAACCCAGGAGGGACCCGGCTACCAAGCTGAGCATTTCCTCTGAGACAGTGGAGCACAGCCCCACCTTGGTCTGCAGGGGCTGCAGGGTAAATTCGGATGCGCCACAAGGCTGCGGAGAAGACTGCAAGAGGGTCCCTCCGCCCAAACCCAGGAGGAACCCCAAAACGCAGCTGAGCACCTCCTTTGATGATTCCTGCATCAGGAAGCACATTGGCTCCAAGAGTCACTCCCCCTCTGCCGAGTGCGAGCGCAACCCCTCTCCGCCGAGCGACGAGAGTCCCAGCCACCACTCCGACTCGGATGAGCCTGTCTACATCGAGATGGGCGCCAGTGTTGGGGGCGGCGGGCACACAGAGGCGCCCAAGAGTGAGGACGAGGAGCTGGGAGAGTCTGTGTACGAGGAGATGAAGTACCCTCTCCTGGATGATATGGACTACTGCTGGGAACCCCCAGGGTGCCGCTCCGCCTGCCCCATCCCGGCGCTCCTGGACCCAGAGTCTCTCAACCGCTGCTCCACCCCGCGTAACATTCCCCTATGCGACATCCCTGCGCCGTTTCCCAACTTGCTCACCCACCGGCCGCCCCTCCTGGTGTTCCCCCCTGCGCCGGCCCAGTACTCGCCAAACTCGGACGAGTCCCCGCTCACCCCTCTGGATCCACTGACGAAGCTGCCCATGATGGACAACCCCTGCGCCTACAACAAGTCTCCCACCTCCTCTTCTGAGCCCCCCCTGGCGCACCTTCGCAGGGAGCTGACAGCCACGCCCACCCTGACAGTGTCGGGTCGCTCGTCGGCTCCGCCCCTGCCCTGCACCCTCTACAAGTCCTCAGCCTCCTCAGCCCACGGTTATCAGCGCAGCCACTCAGCCTGCCCCTCTCCCGTCAGCATGGGCCGCTGCCTCACGCCGCTTAGCCTGATGCGCACACCGCCCTTCGACGCCCCCATGCCCCTCACGGGCGGGCTGCCGTGCAGCGCCTCCACCACGCCCCATGGAAAGGGCTCGCCCCCACAGGACTGCATAGCTGGGGGCAGGCTGCATGGGTCGATGCAGAACGTATCCACGGGACGCTCACGCACACCGACCAGCCCCCTGGACGAGCTGACCAACCTGTTCACCGCCGGCCGGAACATGATGAAGAAGAACACCGGTGGGAGAAAGTCCAAGGAGCCCGGGGAGACCGAATCCAAGAGTAAGTCTCACAGCGTGTCAAAACGTGATGGCAAGGAGCGGCACAGTCACAAGGAGTCCAAACGGGAGAGTAAGGATCGTAGCAAAGAGTATTCTTCTCACCTGCGCAACACCAAGGACAGGAGCTGTAGCAGCGTGGAGCCGCTGCCCAGGCGATATAGCAAAGACCAAGGTTGTAACAGTGTGGAGCCCTTGCCTATGAAACGGGACAGCAGAGACCGGGGTTGTAACAGTGTGGAGCCCTTGCCTATGAAACGGGACATCAGAGACCGGGGTTGTAACAGTGTGGAGCCCTTGCCTATGAAAATGGACAGTAAAGGCAGAGGTTGTAAAAGTGTGGAACTCCCGCCTGTCAGACGGGACAGTAAAGACAGAAGTGTCCATGGCATGGAGCCGTTACTACAACTGGACAGCAAAGACTCTCCCCGGAATGGTGTCGAGTCCAGACCAGACAGCAAAGACTCTCCCCGGAATGGTGTGGAGTCCAGACACGACAGCAAAGACTCTCCACGGAATGGTGTGGATTCCAGACACGACAGCAAAGACTCTCCCCGGAATGGTGTGGATTCCAGACACGACAGCAAAGACTCTCCCCGGAATGGTGTGGATTCCAGACGCGACAGCAAAGACTCTCCCCGGAATGGTATGGAGTCCAGACACGACAGCAAAGACTCTCCCCGGAATGGTGTGGAGTCCAGACACGACAGCAAAGACTCTCCCCGGAATGGTGTGGAGTCCAAACACGACAGCAAAGACTCTCCCTGGAATGGTGTGGATTCCAGACACGACAGCAAAGACTCTCCCCGGAATGGTGTGGAGTCCAGACACGACAGCAAAGACTCTCCCCGGAATGGTGTGGAGTCCAGACCAGACAGCAAAGAAAGGCTCAGCCACCAGAACCCACCAGAACTTCTACCCAGGCAAGATAGCAAAGACCAAAACAGGAACGGAATTGATTCGAGACATGACCGCAAAGTACGAATGGATCAGCCACCAGAGCTCCTACCAAGGCAAGATAGCAAAGACCGAACCAGGAATGGAATGGATTCGAGACACGAAAGCAAAGAACAAATGAACCAGCCACCAGAGCTTCTACCCAGGGAAGATAGCAAAGACCAAGTCAGGTACGGAATGGATTCGAGACACGACAGCAAAGTACGAATGGACCAGCCACCAGAGCTCCTACCCAGACAAAAATGCAAAGATTCACCCAGAAATGGCATTGAGTGCAGACGTaatgacaaagacagagacagggaaaGCTACAGCCTAGAGTCTAGACATGAGGGCAAAGAACAAAGTTACAATGGAATGGAGCCCTTCCCCTTACCCCGACAGGAAATCAAAGAGTCAGACAGAAACGGCCTTGAAGCCAGCAGGCGTAAAAGCAAGGACAGAAGCTGCAATGGCTCAGAGCTGCCCCCCCGGCGCGATAGCTACGGCAAGAGTGCCAATAGGGTAGATCTTAGGTGCGTCAATAAAGACCGGGTTGGTCATAGCTCAGAGGTCTTGCCCAGGCGTGATGTCAGAGATAGGGGGACCTATAGCGTTGAGCAATCAAAAGCACAAGCGAGGAACGGTGTATCAGGGCAACAACAATCATCGACTGCCACACCAACTCGGCATGGGAGACCTGCTGGCAGTCCGCCAATGGGGTTTGGATCTGGCAATACAGAGCTGAAACCAGCACGTACAAAGTATGGCCACTCCTCCTCTGCCCCAGTTACACCCTCTCCCTTAGGGACCCCACAGAGGCAAGCATCAGAGGCACAGATGCCCTGGAAGTGTGGGGACAGCACCATGCTGGAGCAGATCGAGAGGAAACGCTCCCTGTGCATGGAGATCCGTTCCAGGCAGCAGCCAGACAGGAACACCCCGGACAGGAACCTCTGTAAGCAGGACAGCAAGCCTACCCTCCCCATCTGGGGGAAGAGCAACGGAGCCAAAAAGATCCAGCCTCCCCCCTACCCAACACAAACCACCGTGTTCTGGGACACAGCCATCTGACAATAACCCGCTTGGCCTCACGCCCATCCTCCTTCTGAACTCTGTGCCTTCTGATTGGCCCTCTCCACATCAGAGGTGTCAGGGGCAGCCAATAAGAGCAGGGGGGGGGTCGCTGATGTCAAAGGACAATGGTGGTTACCATAGCAACATTTCTGGTTGTTCAGGTTGTCATTTTTTCTTATCACCAGTGATATTTGATATTTTTCTATTTTGTGTGACTTCGTATGAATAGATATTTTCTAAACAAAAAGCTATGAAGCAGCAAAAAACGATGTAGTTGTAGATCAATCCGATgtagttttttaaaaatgttttttgttttggtATTTAACATTTTAAAGCATATTCTATCAAGCATAATTCTTTATGCCAAGTGCTCAATTAATTTCCAATGCTAGACGTACTCTTTTGAATGTAGGATATTCTGACAGTCAACACGCTGTCACTGTTGAGGAGTTCAGTtgacatacaatacaatacctgtcaaaagtttggacacgcctactcattcaaaggtttttctttaattttttacaattttctaggttgtagaataatagtgaagataac
>XM_036966883.1
tctatgtgtgtgatgctggtagggtctgtctatgtgtgtgatgCTGGTAGGGTCTGTCAATGTGTGTGATGCTGGTAgggtctgtccatgtgtgtgatgctggtagggtctgtctatgtgtgtgatgCTGGTAGGGTCTATCCATGTGTGTGATGCTGGTAGGGTCTGTCCATGTGTGGGTGATGATGGTAGGGTCTGTCGATGTGTGTGATGCTGGTAGGGTCTGTCGATGTGTGTGATGCTGGTAgggtctgtccatgtgtgtgatgctggtagggtctgtccatgtgtgtgatgctggtagggtctgtccatgtgtgtgcaGATGAGTGTAAAGCTGGCTCCTGGGTTGGAGTATAGCATTGTTTGGACAGGGGCCTTGGGTCTCTCTGGCTACCCAGGGGAGGGAGCACTGGCCTGGGCATCGACAGGCCTCGCTACCCCCTGTCACCGCCTTGGCCCTGGAGGACTCCTTTGAGCAAGCCCAGCTGTTGGGAGCGTACAATGGCTACTGGGCTTCCCTGTGGATTGAAGTGGCTTTCTGTACACGTGCTCCGAGATCTGTCTGAGTTGTTCTGCGTCTCGCACTGGACCCACCTGGAGAACATTGCTTTGGCCCTCCTCAAGCCAGCAGGGACACAGCTCTACTgatggGCGAAGAGGTGGTGACCGAGGAGAAGCACCTGCACATGGGCTCCATGACCATGCCAGCCCCCCCGCAGCTTGCTTGCGGGCCGGGCTTTGCCGTGCGCTCCCAGTCACTACACTCGGTGGGCGGGGGCAGtaacgatggtggggaggaggagatgggcaGCCCTACCTCCCGTAAGCAGCCCCCACCCAAACCCAGGAGGGACCCGGCTACCAAGCTGAGCATTTCCTCTGAGACAGTGGAGCACAGCCCCACCTTGGTCTGCAGGGGCTGCAGGGTAAATTCGGATGCGCCACAAGGCTGCGGAGAAGACTGCAAGAGGGTCCCTCCGCCCAAACCCAGGAGGAACCCCAAAACGCAGCTGAGCACCTCCTTTGATGATTCCTGCATCAGGAAGCACATTGGCTCCAAGAGTCACTCCCCCTCTGCCGAGTGCGAGCGCAACCCCTCTCCGCCGAGCGACGAGAGTCCCAGCCACCACTCCGACTCGGATGAGCCTGTCTACATCGAGATGGGCGCCAGTGTTGGGGGCGGCGGGCACACAGAGGCGCCCAAGAGTGAGGACGAGGAGCTGGGAGAGTCTGTGTACGAGGAGATGAAGTACCCTCTCCTGGATGATATGGACTACTGCTGGGAACCCCCAGGGTGCCGCTCCGCCTGCCCCATCCCGGCGCTCCTGGACCCAGAGTCTCTCAACCGCTGCTCCACCCCGCGTAACATTCCCCTATGCGACATCCCTGCGCCGTTTCCCAACTTGCTCACCCACCGGCCGCCCCTCCTGGTGTTCCCCCCTGCGCCGGCCCAGTACTCGCCAAACTCGGACGAGTCCCCGCTCACCCCTCTGGATCCACTGACGAAGCTGCCCATGATGGACAACCCCTGCGCCTACAACAAGTCTCCCACCTCCTCTTCTGAGCCCCCCCTGGCGCACCTTCGCAGGGAGCTGACAGCCACGCCCACCCTGACAGTGTCGGGTCGCTCGTCGGCTCCGCCCCTGCCCTGCACCCTCTACAAGTCCTCAGCCTCCTCAGCCCACGGTTATCAGCGCAGCCACTCAGCCTGCCCCTCTCCCGTCAGCATGGGCCGCTGCCTCACGCCGCTTAGCCTGATGCGCACACCGCCCTTCGACGCCCCCATGCCCCTCACGGGCGGGCTGCCGTGCAGCGCCTCCACCACGCCCCATGGAAAGGGCTCGCCCCCACAGGACTGCATAGCTGGGGGCAGGCTGCATGGGTCGATGCAGAACGTATCCACGGGACGCTCACGCACACCGACCAGCCCCCTGGACGAGCTGACCAACCTGTTCACCGCCGGCCGGAACATGATGAAGAAGAACACCGGTGGGAGAAAGTCCAAGGAGCCCGGGGAGACCGAATCCAAGAGTAAGTCTCACAGCGTGTCAAAACGTGATGGCAAGGAGCGGCACAGTCACAAGGAGTCCAAACGGGAGAGTAAGGATCGTAGCAAAGAGTATTCTTCTCACCTGCGCAACACCAAGGACAGGAGCTGTAGCAGCGTGGAGCCGCTGCCCAGGCGATATAGCAAAGACCAAGGTTGTAACAGTGTGGAGCCCTTGCCTATGAAACGGGACAGCAGAGACCGGGGTTGTAACAGTGTGGAGCCCTTGCCTATGAAACGGGACATCAGAGACCGGGGTTGTAACAGTGTGGAGCCCTTGCCTATGAAAATGGACAGTAAAGGCAGAGGTTGTAAAAGTGTGGAACTCCCGCCTGTCAGACGGGACAGTAAAGACAGAAGTGTCCATGGCATGGAGCCGTTACTACAACTGGACAGCAAAGACTCTCCCCGGAATGGTGTCGAGTCCAGACCAGACAGCAAAGACTCTCCCCGGAATGGTGTGGAGTCCAGACACGACAGCAAAGACTCTCCACGGAATGGTGTGGATTCCAGACACGACAGCAAAGACTCTCCCCGGAATGGTGTGGATTCCAGACACGACAGCAAAGACTCTCCCCGGAATGGTGTGGATTCCAGACGCGACAGCAAAGACTCTCCCCGGAATGGTATGGAGTCCAGACACGACAGCAAAGACTCTCCCCGGAATGGTGTGGAGTCCAGACACGACAGCAAAGACTCTCCCCGGAATGGTGTGGAGTCCAAACACGACAGCAAAGACTCTCCCTGGAATGGTGTGGATTCCAGACACGACAGCAAAGACTCTCCCCGGAATGGTGTGGAGTCCAGACACGACAGCAAAGACTCTCCCCGGAATGGTGTGGAGTCCAGACCAGACAGCAAAGAAAGGCTCAGCCACCAGAACCCACCAGAACTTCTACCCAGGCAAGATAGCAAAGACCAAAACAGGAACGGAATTGATTCGAGACATGACCGCAAAGTACGAATGGATCAGCCACCAGAGCTCCTACCAAGGCAAGATAGCAAAGACCGAACCAGGAATGGAATGGATTCGAGACACGAAAGCAAAGAACAAATGAACCAGCCACCAGAGCTTCTACCCAGGGAAGATAGCAAAGACCAAGTCAGGTACGGAATGGATTCGAGACACGACAGCAAAGTACGAATGGACCAGCCACCAGAGCTCCTACCCAGACAAAAATGCAAAGATTCACCCAGAAATGGCATTGAGTGCAGACGTaatgacaaagacagagacagggaaaGCTACAGCCTAGAGTCTAGACATGAGGGCAAAGAACAAAGTTACAATGGAATGGAGCCCTTCCCCTTACCCCGACAGGAAATCAAAGAGTCAGACAGAAACGGCCTTGAAGCCAGCAGGCGTAAAAGCAAGGACAGAAGCTGCAATGGCTCAGAGCTGCCCCCCCGGCGCGATAGCTACGGCAAGAGTGCCAATAGGGTAGATCTTAGGTGCGTCAATAAAGACCGGGTTGGTCATAGCTCAGAGGTCTTGCCCAGGCGTGATGTCAGAGATAGGGGGACCTATAGCGTTGAGCAATCAAAAGCACAAGCGAGGAACGGTGTATCAGGGCAACAACAATCATCGACTGCCACACCAACTCGGCATGGGAGACCTGCTGGCAGTCCGCCAATGGGGTTTGGATCTGGCAATACAGAGCTGAAACCAGCACGTACAAAGTATGGCCACTCCTCCTCTGCCCCAGTTACACCCTCTCCCTTAGGGACCCCACAGAGGCAAGCATCAGAGGCACAGATGCCCTGGAAGTGTGGGGACAGCACCATGCTGGAGCAGATCGAGAGGAAACGCTCCCTGTGCATGGAGATCCGTTCCAGGCAGCAGCCAGACAGGAACACCCCGGACAGGAACCTCTGTAAGCAGGACAGCAAGCCTACCCTCCCCATCTGGGGGAAGAGCAACGGAGCCAAAAAGATCCAGCCTCCCCCCTACCCAACACAAACCACCGTGTTCTGGGACACAGCCATCTGACAATAACCCGCTTGGCCTCACGCCCATCCTCCTTCTGAACTCTGTGCCTTCTGATTGGCCCTCTCCACATCAGAGGTGTCAGGGGCAGCCAATAAGAGCAGGGGGGGGGTCGCTGATGTCAAAGGACAATGGTGGTTACCATAGCAACATTTCTGGTTGTTCAGGTTGTCATTTTTTCTTATCACCAGTGATATTTGATATTTTTCTATTTTGTGTGACTTCGTATGAATAGATATTTTCTAAACAAAAAGCTATGAAGCAGCAAAAAACGATGTAGTTGTAGATCAATCCGATgtagttttttaaaaatgttttttgttttggtATTTAACATTTTAAAGCATATTCTATCAAGCATAATTCTTTATGCCAAGTGCTCAATTAATTTCCAATGCTAGACGTACTCTTTTGAATGTAGGATATTCTGACAGTCAACACGCTGTCACTGTTGAGGAGTTCAGTtgacatacaatacaatacctgtcaaaagtttggacacgcctactcattcaaaggtttttctttaattttttacaattttctaggttgtagaataatagtgaagataac

Function

NR:

description
PREDICTED: TRIO and F-actin-binding protein-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966882.1 False 4976 mRNA 0.55 7 34572033 34604132
XM_036966883.1 True 4610 mRNA 0.55 6 34572033 34604132

Neighbor

gene id symbol gene type direction distance location
LOC110509050 LOC106598248 coding downstream 90174 34422172 ~ 34481859 (-)
LOC110509056 LOC106598260 coding downstream 250443 34304706 ~ 34321590 (-)
vcam1a LOC106598299 coding downstream 271405 34284268 ~ 34300628 (-)
zgc:110366 LOC105007548 coding downstream 303016 34258195 ~ 34269017 (-)
LOC118944872 NA coding downstream 321595 34247945 ~ 34250438 (-)
LOC110509072 atp1b3 coding upstream 109135 34713267 ~ 34728197 (-)
gk5 gk5 coding upstream 133330 34737462 ~ 34761423 (-)
LOC110509071 LOC106598156 coding upstream 169623 34773755 ~ 34806814 (-)
LOC110509075 LOC106598143 coding upstream 208585 34812717 ~ 34824535 (-)
LOC110508238 LOC106598127 coding upstream 264381 34868513 ~ 34888930 (-)
G2131643 NA non-coding downstream 1642 34568502 ~ 34570391 (-)
G2131623 NA non-coding downstream 77389 34494119 ~ 34494644 (-)
G2131619 NA non-coding downstream 88079 34483698 ~ 34483954 (-)
G2131318 NA non-coding downstream 88647 34483109 ~ 34483386 (-)
G2131281 NA non-coding downstream 162581 34405857 ~ 34409452 (-)
G2131699 NA non-coding upstream 4898 34609030 ~ 34609835 (-)
G2131702 NA non-coding upstream 15512 34619644 ~ 34619924 (-)
G2131735 NA non-coding upstream 78146 34682278 ~ 34682482 (-)
G2131736 NA non-coding upstream 80849 34684981 ~ 34685268 (-)
G2131809 NA non-coding upstream 249428 34853560 ~ 34854537 (-)
G2131641 NA other downstream 53904 34516522 ~ 34518129 (-)
G2131621 NA other downstream 85857 34485869 ~ 34486176 (-)
G2130780 LOC106598333 other downstream 503960 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 505368 34040206 ~ 34066665 (-)
LOC110509052 LOC106598333 other downstream 513763 34038788 ~ 34058344 (-)
lyrm4 lyrm4 other upstream 1401357 36005489 ~ 36017873 (-)
LOC118944844 riok1 other upstream 1419648 36023714 ~ 36025735 (-)
G2132971 NA other upstream 1620081 36224213 ~ 36225379 (-)
G2132966 NA other upstream 1631383 36235515 ~ 36249775 (-)
G2133007 NA other upstream 1658870 36263002 ~ 36263330 (-)

Expression


Co-expression Network