fbxo36b (LOC106598179)


Basic Information

Item Value
gene id fbxo36b
gene name LOC106598179
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 34648851 ~ 34652522 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021590020.2
TGTTGCAGCAGGAGGAGTTTCGTTACATTCTAGCACGTTGCGGCAGGAAGGAATGTTGCAGCAGGAGGAGGTTCGTTAAATTCTAGCACGCTGGAAGTAAACTGAACGAACCCGTTCGTTGCCGTGGCAACCACAAACCAAGCGTCCAAAATGTCGACTTTGCTGGGGAAAAGTTTATTTGAAGTCAGTGGTCAAGGTCCTGCACCCAATAAAGACTTCTTCCAATTTTCTGTTACCAAGACCGAGGTTATTTGGAGATGGTGGAAGATTTCTTTGAGAAGTGATGGTAGGAACACAAAGCCAGGAGAACTGAGGGAGTCTCACAATGACTACTTGGATGACAGCCTGCTTCAGAGTCAGGTGAGTGTGGTGTTTGGCCCACGGATCCTTCAGTACAGCCAGGCACTATGTCAGGGCCACTATGACTACCTGGAGCGTCTGCCCGACCCCCTGCTTCTCCACATCCTGACCCATCTGGAACTGGAGGACGTGGCACGGCTTGGACACACCTCACACAGGTTCAGGAAGcTGTGTCGTTCGGAGGAGTTCTGGGAGCAAGCGGTGCGCGGTCACTGCGGCGCCGTGTCGGCCGAGGTGGAGTCCCTGGCCCTGGAGCTGGGCTGGAAGAGCGTCTTCTTCACCAGCAAGCTGCAGCTGCAGAAACAGATCAGccgcaggaggaagaggagccaGAAGCTACTCTGTACAGACCCGGAGCGCTATGATGTAGACGCAATGGTGGAGCGCAGTGAGGACCCAGAGAGCCGCGCTGCAGATATAGAGCCAGGTTCTGAGTCGGACCCTGGGCCGGAGCAGCTCTGTACAGACATGCAGCGCTGTGGGGTGATTGCGGGTCAGGGTCGTGGTGTGGCACAGGGGGACTGGAGCTCTGATTCAGGGAGCTCACTGAAATGACTTTTGTTTTATCTTTACACTCTAAATAGGATCCTTGAGGTTTCCATGCTGAGGAATAGAGGACTGCTTGATTTCGGGTGGAGACAGTACAAGTGTTTTTTTTGATACAAATATGATGACTATTGAATGTTTGATGAATTCATGTTAGTTATGCTTCCTGTCTTTCAAACAATACAGTGGCTGTGTTGTGTTGGAAGACAGTTTCTCTCATAGACAGTTGCCTGGCAGCAAAGGATGTTGTGGCAATGGCTGGAGATGTTAATATGTATTTTTACCCGCCGTTGCGTTGTGTTGTACATGTGCCATGATCTTTTTCCTTATACAATTTAGCACGAGCAGGACAATACCATTCAGTGGAATGATTCAGGGAGGGCACGTTTGGTAAAAATAAAAGGATGAAA
>XM_036966931.1
TGTTGCAGCAGGAGGAGTTTCGTTACATTCTAGCACGTTGCGGCAGGAAGGAATGTTGCAGCAGGAGGAGGTTCGTTAAATTCTAGCACGCTGGAAGTAAACTGAACGAACCCGTTCGTTGCCGTGGCAACCACAAACCAAGCGTCCAAAATGTCGACTTTGCTGGGGAAAAGTTTATTTGAAGTCAGTGGTCAAGGTCCTGCACCCAATAAAGACTTCTTCCAATTTTCTGTTACCAAGACCGAGGTTATTTGGAGATGGTGGAAGATTTCTTTGAGAAGTGATGGTCAGGTGAGTGTGGTGTTTGGCCCACGGATCCTTCAGTACAGCCAGGCACTATGTCAGGGCCACTATGACTACCTGGAGCGTCTGCCCGACCCCCTGCTTCTCCACATCCTGACCCATCTGGAACTGGAGGACGTGGCACGGCTTGGACACACCTCACACAGGTTCAGGAAGcTGTGTCGTTCGGAGGAGTTCTGGGAGCAAGCGGTGCGCGGTCACTGCGGCGCCGTGTCGGCCGAGGTGGAGTCCCTGGCCCTGGAGCTGGGCTGGAAGAGCGTCTTCTTCACCAGCAAGCTGCAGCTGCAGAAACAGATCAGccgcaggaggaagaggagccaGAAGCTACTCTGTACAGACCCGGAGCGCTATGATGTAGACGCAATGGTGGAGCGCAGTGAGGACCCAGAGAGCCGCGCTGCAGATATAGAGCCAGGTTCTGAGTCGGACCCTGGGCCGGAGCAGCTCTGTACAGACATGCAGCGCTGTGGGGTGATTGCGGGTCAGGGTCGTGGTGTGGCACAGGGGGACTGGAGCTCTGATTCAGGGAGCTCACTGAAATGACTTTTGTTTTATCTTTACACTCTAAATAGGATCCTTGAGGTTTCCATGCTGAGGAATAGAGGACTGCTTGATTTCGGGTGGAGACAGTACAAGTGTTTTTTTTGATACAAATATGATGACTATTGAATGTTTGATGAATTCATGTTAGTTATGCTTCCTGTCTTTCAAACAATACAGTGGCTGTGTTGTGTTGGAAGACAGTTTCTCTCATAGACAGTTGCCTGGCAGCAAAGGATGTTGTGGCAATGGCTGGAGATGTTAATATGTATTTTTACCCGCCGTTGCGTTGTGTTGTACATGTGCCATGATCTTTTTCCTTATACAATTTAGCACGAGCAGGACAATACCATTCAGTGGAATGATTCAGGGAGGGCACGTTTGGTAAAAATAAAAGGATGAAA

Function

NR:

description
F-box only protein 36-like isoform X2

GO: NA

KEGG:

id description
K10312 FBXO36; F-box protein 36

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021590020.2 False 1316 mRNA 0.50 4 34648851 34652522
XM_036966931.1 True 1247 mRNA 0.50 4 34648851 34652522

Neighbor

gene id symbol gene type direction distance location
agfg1b LOC106568704 coding upstream 2191 34640019 ~ 34646660 (+)
LOC110509061 LOC106598202 coding upstream 16241 34621855 ~ 34632610 (+)
LOC110508231 LOC106598235 coding upstream 80499 34499546 ~ 34568352 (+)
LOC110508236 LOC106598267 coding upstream 239360 34352592 ~ 34409491 (+)
extl2 extl2 coding upstream 370150 34269056 ~ 34278701 (+)
LOC110508234 NA coding downstream 607 34653129 ~ 34654349 (+)
LOC110509067 grk7 coding downstream 39773 34692295 ~ 34700231 (+)
LOC110509070 LOC106598580 coding downstream 114252 34766774 ~ 34769328 (+)
LOC110509069 NA coding downstream 144210 34796732 ~ 34803585 (+)
LOC110509077 NA coding downstream 159372 34811894 ~ 34814719 (+)
G2131379 NA non-coding upstream 51379 34597245 ~ 34597472 (+)
G2131376 NA non-coding upstream 53750 34594856 ~ 34595101 (+)
G2131373 LOC106598217 non-coding upstream 58709 34589889 ~ 34590142 (+)
G2131371 NA non-coding upstream 59418 34589164 ~ 34589433 (+)
G2131410 NA non-coding downstream 12426 34664948 ~ 34665217 (+)
G2131413 NA non-coding downstream 16755 34669277 ~ 34670019 (+)
G2131417 NA non-coding downstream 35361 34687883 ~ 34688100 (+)
G2131419 NA non-coding downstream 37983 34690505 ~ 34690704 (+)
G2131384 NA non-coding downstream 60225 34712747 ~ 34715041 (+)
G2131383 NA other upstream 43898 34603485 ~ 34604953 (+)
G2130749 LOC106598333 other upstream 579757 34038792 ~ 34069094 (+)
G2130731 NA other upstream 640589 34007631 ~ 34008262 (+)
G2129859 NA other upstream 919323 33729148 ~ 33729528 (+)
G2131416 NA other downstream 34749 34687271 ~ 34687640 (+)
G2131426 NA other downstream 49684 34702206 ~ 34783418 (+)
G2131933 NA other downstream 439177 35091699 ~ 35093034 (+)
G2132291 NA other downstream 1047324 35699846 ~ 35700235 (+)
LOC110508289 LOC106597230 other downstream 1320917 35973386 ~ 35975132 (+)

Expression


Co-expression Network