LOC110509067 (grk7)


Basic Information

Item Value
gene id LOC110509067
gene name grk7
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 34692295 ~ 34700231 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021590024.2
TGAAGAACCCAGTCACGTAGGGGGGATAGACCAGACAAAGCCACCAAGATGTGTGACATGGGGGGATTGGATAACCTGGTGGCCAACACGGCCTACCTGAAAGCCCAGGGTGGCGACGACAAGGAGATGAAAAAGCGTCGTCGGAGTTTGTCACTGCCCCTGGCCGAGCAGTGTGCCACCATCCGGACTACCATTGATAAGAACTTTGAGTCGCTCTGTGAGAGGCAGCCAATCGGCAAGAAGTTCTTCCGGCAGTTCCTGACTGCTACCCCAGAGTACATCAATGCCGCTGAGTACCTGGACGAGCTGAATGACTGGGATCTGGCGGAAGGTGCTGACAAGGATAAGCAGAGGGCGAACATGATGAAAAAGTTTTGCAAGGCCGACTCCAATAACTTTCTGACCTACCTCACTGGGGAGGTAGCCGACAAGTGTAAGGCAGTGACGGACAATGACTTTGACGAAGTGATGAATGTCAAGGTGAAGGAAGCCACACGGGAGTTTCTGAAAGACAAGCCCTTCACGGACTATCAAACTAGCCCCTTCTTTGACAAATTCCTGCAGTGGAAGGAGTACGAGAAGCAGCCCATCAGTGATAAAACCTTTTATGAGTTCAGAACTCTGGGTAAGGGAGGTTTCGGAGAGGTATGTGCCGTACAGGTGAAGAACACAGGCCAGATGTACGCCTGCAAGAAGCTGTGCAAGAAGCGCCTGAAGAAGAAACATGGTGAGAAGATGGCCCTGCTGGAGAAGCAGATCCTGGAAAAGGTCAACAGCCTGTTTCTTGTTAACCTGGCCTACGCCTATGACACCAAGACCCACCTGTGCCTTGTCATGACCCTGATGAACGGCGGTGACCTCAGGTACCACATCTACTACGTCAGTGAGAAGACCAAGGGTATTGAGATGGCACGCATCATCTACTACACAGCGCAGATCTGCACAGGCATTCTTCATCTGCATGAAATGGATATCATATATCGTGACATGAAGCCCGAGAACGTGCTGCTGGACAGTTTTGGCCAGTGCCGACTCTCTGATCTGGGTCTGGCCGTGGAGCTACCTGCTGGAAAGACCATCTGCCAGAAGGCTGGAACCGGGGCATACATGGCCCCTGAGATCCTGAACGAAGTTCCCTACAGGACATCGGTGGACTGGTGGGCGCTGGGATGCAGTATTTACGAGATGGTGGCTGCCTATACCCCGTTCAAGGGTCCCGAATCCGGGAAGcagaaggtggagaaggaggaggtgcaACGTCGCATCTGCAAAGAGGAACCCCCATGGGAGCACAAGAACTTTGACGCGCCCACCAAAGCCATCATCCAGGAGTTCCTCAAGAAGAATATTGATGAACGCCTGGGCTGCAAgggaggaggagaggaccccCGTAAGCACGAGTGGTTCAAGTCCATCAACTTTCCTCGTCTGGAGGCTGGTTTGATCGACCCCCCTTGGGTGCCCAAGCCCAACGTGGTCTATGCCAAGGACACTGGCGACATCGCCGAGTTCTCCGAGATTAAGGGCATTGTGTTCGACGCCAACGATGAAAAGTTCTTCAAGGAGATTGGCACGGGAGCCGTGGCCATTCCCTGGCAACAGGAGATGATCGACACGAACCTGTTTGACGAGCTGAACGACCCCAACAGGAAAGAGTGTGCTGGGGGTGATGACGGGGAGGGGAAGTCTGGCACGTGCACATTGCTGTGAACAGTCAAACCTGGCACATATATACACCGAAACATGGCACCAATACATCAACTGATTCGCTCATGTTCTGTAAAATTCTTGTAAAACATTACACACAGAAATAATTGAACAAACTGCATCGGAgaacagcaggagagagagatgaggtatcCTTCACTGGACCTGGTCGGTTGCCATTGATTTTAGTAATATGGGTTGAAAGTTCCCTGAGCTTCCAAACACATAGGAGAGTAAAGGTGGCTTTAACCAAGATTGTTATTGGTAGTCTCTTCAGATTGCAGCTACTCCCAGATGTTTCTCATGATGTATTAGTGCCCTCCTGGCCAACAGGGGTCGTAAGATTAAAATATAACAAATTGATATTgtggataaaacattttttttaatgattaaTGGATAAACACAGGCCTCTGTTTACATACAGCCTGCATCAGAAAGATGTGTGTATGTAGACTGCAGTGCTAGCCCTAGGCCTGAAACCTAGGCATTGGCCACAATGGAGCATGGTATGCTGAATTTACTAGTCTGGGAATATGTTTGGGATCTCATTCTTGATTGTGTTCCATTAATTGAATTTGATAGAGGCCACATTTttttcacccccccctctctctaaagGCAGAGGTGataacttttttttgttgtcaaataTTTCAAGAGATCAATGTCTGTATGGACACATCACCTTTTTAGAAATTCCACCCGGAAGCGATCAGAAGCGAATAAATAATATTTCTACATCAGAAGTTATTTCAAAACGAAATGTGGCAGAGATTTTACTTACCTATAATGACTAACCTTTAGTCGATCACTAAATTTCCAAGCAGATGCACTTTCCAAGCTAGCATCTAGTTTTATTTCAAAACTATGTTGTATATGAATATAAATATGTATATCTATGCATTGACATGGGGAGAAATCCACAGATTATGTGCTAGTCAGGACTTGATGAATGCTCAACTCTCATTGGGCTGTGAAGGTTCTATGCCCTGGTTTCTcaggagagaggaatggaatgTAGAGAAAATCCAGTGGGATTCTATATTCCAAGATTGAACATTGAGAGGAGTTGGGCTTGGCCAACAATGTGTTCCTGTACCAGGAATATATATTTGTCCCTCCCCCCAATGCTTCCATTCATGTGATTTGTCTGAAGTTCGAGATGCATGTACAAATCTGAAGTTAGAATCTGGTTAGCTTGCTAGCTTTTAACAAAGAAAATCACAGTTCCCTTGTTTGTTGCCTCAGGGTTAAGACTTAtttcacataataataataacaataatatattattattatataactttaaatggacaaattgtattatattatactatgaATATCAATATCATAAACCTACTTGTAAATATAATTTGAGAGGAAAACATTACATATGCTACTCTATGTCAGTCATTTATTAGGGACTTGCTTGAATCTTGAA

Function

symbol description
grk7 Enables rhodopsin kinase activity. Involved in protein autophosphorylation. Predicted to be located in photoreceptor disc membrane. Predicted to be active in cytoplasm.

NR:

description
rhodopsin kinase 1-like

GO:

id name namespace
GO:0038032 termination of G protein-coupled receptor signaling pathway biological_process
GO:0007601 visual perception biological_process
GO:0007603 phototransduction, visible light biological_process
GO:0006468 protein phosphorylation biological_process
GO:0016020 membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0009881 photoreceptor activity molecular_function
GO:0050254 rhodopsin kinase activity molecular_function
GO:0004703 G protein-coupled receptor kinase activity molecular_function

KEGG:

id description
K00909 GRK1_7; rhodopsin kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021590024.2 True 3151 mRNA 0.46 4 34692295 34700231
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110508234 NA coding upstream 37946 34653129 ~ 34654349 (+)
fbxo36b LOC106598179 coding upstream 39773 34648851 ~ 34652522 (+)
agfg1b LOC106568704 coding upstream 45635 34640019 ~ 34646660 (+)
LOC110509061 LOC106598202 coding upstream 59685 34621855 ~ 34632610 (+)
LOC110508231 LOC106598235 coding upstream 123943 34499546 ~ 34568352 (+)
LOC110509070 LOC106598580 coding downstream 66543 34766774 ~ 34769328 (+)
LOC110509069 NA coding downstream 96501 34796732 ~ 34803585 (+)
LOC110509077 NA coding downstream 111663 34811894 ~ 34814719 (+)
LOC110509073 LOC106568697 coding downstream 124738 34824969 ~ 34867323 (+)
si:ch211-252f13.5 LOC106598121 coding downstream 198296 34898527 ~ 34903418 (+)
G2131419 NA non-coding upstream 1591 34690505 ~ 34690704 (+)
G2131417 NA non-coding upstream 4195 34687883 ~ 34688100 (+)
G2131413 NA non-coding upstream 22276 34669277 ~ 34670019 (+)
G2131410 NA non-coding upstream 27078 34664948 ~ 34665217 (+)
G2131384 NA non-coding downstream 12516 34712747 ~ 34715041 (+)
G2131435 NA non-coding downstream 23691 34723922 ~ 34724213 (+)
G2131427 NA non-coding downstream 35094 34735325 ~ 34739189 (+)
G2131387 NA non-coding downstream 42423 34742654 ~ 34749088 (+)
G2131461 NA non-coding downstream 69426 34769657 ~ 34842222 (+)
G2131416 NA other upstream 4655 34687271 ~ 34687640 (+)
G2131383 NA other upstream 87342 34603485 ~ 34604953 (+)
LOC110508236 LOC106598267 other upstream 318285 34352592 ~ 34409491 (+)
G2130749 LOC106598333 other upstream 623201 34038792 ~ 34069094 (+)
G2130731 NA other upstream 684033 34007631 ~ 34008262 (+)
G2131426 NA other downstream 1975 34702206 ~ 34783418 (+)
G2131933 NA other downstream 391468 35091699 ~ 35093034 (+)
G2132291 NA other downstream 999615 35699846 ~ 35700235 (+)
LOC110508289 LOC106597230 other downstream 1273208 35973386 ~ 35975132 (+)
G2132519 LOC100380659 other downstream 1638863 36339094 ~ 36364994 (+)

Expression

LOC110509067(grk7) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
End of interactive chart.

LOC110509067(grk7) Expression in each Bioproject

Bar chart with 7 bars.
LOC110509067(grk7) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 800.
End of interactive chart.

Co-expression Network