LOC110509072 (atp1b3)


Basic Information

Item Value
gene id LOC110509072
gene name atp1b3
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 34713267 ~ 34728197 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966648.1
ACGCCATTCTCTCATTTTCTCAGGCAATGGAAAACTGGATAAATGCCGCGTTATTCTAGCGTGTCTACAAATCTAGGCTACACTGTCCAAGCCGTTCTTCTATTGTAACCGTACCCGTACCGCATTGAGTAGCGGAGCGAGGCTGACGCTAGTTGCAGAAAACGTCACAGATTTTTCgctttttaattattttatttttttaacaaagcGCAATCTTGCCTCACTCTGCCGCTGGACTCCATTCCAACCACTGATCCAATCACATACCGCCTACATCCCTGATTTCTCCTCATCCTATCGCCCGCTGTTCCTCGTATTTTTAATAAGGAAAAATACAAATTTCCACCATGGCAAGCAACGAAGTCAAACCGACGGCGAAAGAGGATGAGAATGCTGGAAACTGGAAAGATTCCATCTTCAACCCAAGGACCGGGGAGTTTTGTGGGCGCACAGCGAAGAGCTGGGgcctCATCCTCCTGTTCTACTTGGTGTTCTATGCTTTCCTGGCTGGGATGTTCGTCCTCACCATTTGGGTCATGCTGCTGACGCTAGACGACTATGTGCCAAAGTACCGCGACCGGGTGCCACACCCAGGATTGGTCATCAGGCCAAAACAATTGGACATGCTGTTTAACAGATCACAACCTCTCCAGTTCAGCACGTATGTCCAGACCTTAGAGTCTTACCTGCAACAGTACAATGACACGGAGCAGGAGAGGAATGAGGCGTGCACGGCAGGGGTCTACTTTGAGCAAGAGGGAGAGGTGGGCGAGCAGAGGAAGGCCTGTCAGTTCAAGAGGAGCTCTCTGAGCCGCTGCTCCGGCCTGTCCGACTCTACCTTCGGTTACGCTGAGGGGAGACCATGTGTCCTCCTCAAAATGAATAGGATCATTGGGCTGAAGCCGCGTGGAGATCCCTATGTCAACTGCACGGCAAAGAGGGACAACCCCATACAGATGCAGTACTTCCCAAGTGAGGGACGCTTCGATAAAATGTATTTCCCTTACTACGGCAACAAACTTCATGAGAGGTATGTGCAGCCGGTGGTTGCTGTTAAGCTGTTGCTGAACAAGGAGGACTACAACACGGAGCTGACCATTGAATGCCGGATTGAGGGATCCGACCTGCGCAACAACGACGACAGAGACAAGTTCCTAGGCCGTGTCACCTTCCGAATCACAGTCAAAGAGTAGTAGGGAGTAGTGCGGAGGAGGCTAGTGTGGAGAAATGTGGTTCTTACTCCTCCCGGAAGATTCCTGGTAGATTAAGATGGGCCTAATTCCAAACCAATCCCTCCACCCTCACTCCAGATACTAGGCGAGGGACATTCAAATCTGGTCTTTTTCACATCACCTTGGTAATTCATTGATTGGCCAGATAATCTACTCACCTGTTGTTACAGGTCAGTCTCTAGCTAGGCAGGATGGGGAAGGATTAAAACCAGCAGTTCTGTGAAACCTGAATCTCAGATTTGAATACCCTTCTCTTGGGCTCTTGTTGACTCCATCTTGTATTTCTGATAGGGTTGGATATGTGTAAGCATAGCAAGAGTGCTAGATGAAGCAATTATCATATCATAGCTGATGCCAATCCATTCCTTTCAGATCTACAGTGCATCACACCCAAAAAGGGCCTAGACTAGTGCCTACAAATGTAGGAGCTTAATTTGATCAGTCTTTCGTTGCTGAGAATTTAGCAGGAAATATTAACAAaggtttctaaagtttgtaatttccactttgaaatttccgatttgatttgccctaacgaaaaacgTATCCAGCCATACAAAAATtctattcattataatccactTAATACATCACATTTCCTCTTCTGCAGGATTATCTCCCTGctatagcaaactggctcaaattaagatcctacatctgtgatGGTAGGGGGTGAGAGATCGGTGTGCGATTGGATCAAAAGGATAGGGTAGTGATGTCATCAATTTTCAACTTATCTCCTGGAAAAAGCGTTAATCGTGCCAAATTTAATGGAACATCAAGTTCCCTTGTTTACTTCTATGTTTACTCTAGTacaggcctgggcaactccagtcctcgcgGGCCTGATTGGTGGTCACACTTTTGCCCCTAGACCCAACTAACACctctgactccaataatcaactaatcatgatcttcagttaaaAATGAAATGAGTTTACATCAGCTGTGTTTTCTAGGGATGGAGGGAAAAGTGTAACACctatcaggcccccgaggactggagttatCCACCCCTGTTTAGGATGGCGCATATCTTTGTCTTCTCTTTCATTATGTCATTCTAGCAAGAGTCTTTTCATGACTCACCAACCTAACGGCCATCAGACCCTTCTATTAGTGGGCTTTTGTTGTCTGACCCAGTGCTCTAGTGATGATCTAGGCTCAGATCTTATTTTCTATTCAGATGGTCTAGATTGGAGCTTAGATGTGGTAAACTGAACCTAGATCAGGGCTTTAGTGCCAAGGGTTGGATCAACTGTTAGTAGTTAGCCTCAATCAGTATTTAACCATCAGTCATCCACTGTCAATACAACCATGTTTTAAGTTGACCCTCTCATCTGAAAACAGAACAAATAATTATTCCTCAACATCACATCCCATAGATAGAGTCAACCCTAGTGAAACACTGTCGAACCCAGATGCCCTCTACAATTACATGTAATTTAGAATCCTTTTCGTCTTGGGACCACAATttgatattataatattataataggGAACTgtagataggtgtgtgtgtgtggtgtggtctgACCACAACCCAGTGGTGTGCCGTCTGTCTGTCCGg

Function

symbol description
atp1b3 Enables ATPase activator activity; ATPase binding activity; and protein-macromolecule adaptor activity. Involved in several processes, including cellular monovalent inorganic cation homeostasis; ion transmembrane transport; and positive regulation of cation transmembrane transport. Located in plasma membrane and sperm flagellum. Part of sodium:potassium-exchanging ATPase complex.

NR:

description
PREDICTED: sodium/potassium-transporting ATPase subunit beta-3

GO: NA

KEGG:

id description
K01540 ATP1B, CD298; sodium/potassium-transporting ATPase subunit beta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966648.1 True 2805 mRNA 0.45 7 34713267 34728197

Neighbor

gene id symbol gene type direction distance location
LOC110508232 NA coding downstream 109135 34572033 ~ 34604132 (-)
LOC110509050 LOC106598248 coding downstream 231408 34422172 ~ 34481859 (-)
LOC110509056 LOC106598260 coding downstream 391677 34304706 ~ 34321590 (-)
vcam1a LOC106598299 coding downstream 412639 34284268 ~ 34300628 (-)
zgc:110366 LOC105007548 coding downstream 444250 34258195 ~ 34269017 (-)
gk5 gk5 coding upstream 9265 34737462 ~ 34761423 (-)
LOC110509071 LOC106598156 coding upstream 45558 34773755 ~ 34806814 (-)
LOC110509075 LOC106598143 coding upstream 84520 34812717 ~ 34824535 (-)
LOC110508238 LOC106598127 coding upstream 140316 34868513 ~ 34888930 (-)
anxa13l anxa13 coding upstream 182898 34911095 ~ 34921612 (-)
G2131736 NA non-coding downstream 27999 34684981 ~ 34685268 (-)
G2131735 NA non-coding downstream 30785 34682278 ~ 34682482 (-)
G2131702 NA non-coding downstream 93343 34619644 ~ 34619924 (-)
G2131699 NA non-coding downstream 103432 34609030 ~ 34609835 (-)
G2131696 NA non-coding downstream 115744 34597255 ~ 34597523 (-)
G2131809 NA non-coding upstream 125363 34853560 ~ 34854537 (-)
G2131816 NA non-coding upstream 138468 34866665 ~ 34867243 (-)
G2131824 NA non-coding upstream 146857 34875054 ~ 34875690 (-)
G2131836 NA non-coding upstream 163688 34891885 ~ 34892090 (-)
G2131851 LOC106598110 non-coding upstream 208311 34936508 ~ 34945229 (-)
G2131641 NA other downstream 195138 34516522 ~ 34518129 (-)
G2131621 NA other downstream 227091 34485869 ~ 34486176 (-)
G2130780 LOC106598333 other downstream 645194 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 646602 34040206 ~ 34066665 (-)
lyrm4 lyrm4 other upstream 1277292 36005489 ~ 36017873 (-)
LOC118944844 riok1 other upstream 1295583 36023714 ~ 36025735 (-)
G2132971 NA other upstream 1496016 36224213 ~ 36225379 (-)
G2132966 NA other upstream 1507318 36235515 ~ 36249775 (-)
G2133007 NA other upstream 1534805 36263002 ~ 36263330 (-)

Expression


Co-expression Network