trnaw-cca-62


Basic Information

Item Value
gene id trnaw-cca-62
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35132555 ~ 35132626 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaw-cca-62
aacctcgtggcgcaatggtagcgtgtctgactccagatcagaaggttgcgtgttcaactcacgtcgtggtca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaw-cca-62 True 72 mRNA 0.54 1 35132555 35132626

Neighbor

gene id symbol gene type direction distance location
LOC110509086 LOC106598057 coding downstream 27536 35092222 ~ 35105019 (-)
LOC110509081 LOC106598107 coding downstream 76177 34925386 ~ 35056378 (-)
anxa13l anxa13 coding downstream 210943 34911095 ~ 34921612 (-)
LOC110508238 LOC106598127 coding downstream 243625 34868513 ~ 34888930 (-)
LOC110509075 LOC106598143 coding downstream 308020 34812717 ~ 34824535 (-)
trnaw-cca-63 NA coding upstream 1237 35133863 ~ 35133934 (-)
trnaw-cca-64 NA coding upstream 2796 35135422 ~ 35135493 (-)
trnaw-cca-65 NA coding upstream 4355 35136981 ~ 35137052 (-)
trnaw-cca-66 NA coding upstream 5659 35138285 ~ 35138356 (-)
trnaw-cca-67 NA coding upstream 6963 35139589 ~ 35139660 (-)
G2131990 NA non-coding downstream 6832 35123400 ~ 35125723 (-)
G2131976 NA non-coding downstream 18618 35113693 ~ 35113937 (-)
G2131974 NA non-coding downstream 20106 35111996 ~ 35112449 (-)
G2131950 NA non-coding downstream 63416 35068518 ~ 35069139 (-)
G2131906 NA non-coding downstream 89877 35041966 ~ 35042678 (-)
G2132010 NA non-coding upstream 124061 35256687 ~ 35257074 (-)
G2132016 NA non-coding upstream 202252 35334878 ~ 35335159 (-)
G2132018 NA non-coding upstream 223798 35356424 ~ 35356686 (-)
G2132074 NA non-coding upstream 253298 35385924 ~ 35386152 (-)
G2132083 NA non-coding upstream 264391 35397017 ~ 35397255 (-)
G2131641 NA other downstream 614426 34516522 ~ 34518129 (-)
G2131621 NA other downstream 646379 34485869 ~ 34486176 (-)
G2130780 LOC106598333 other downstream 1064482 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 1065890 34040206 ~ 34066665 (-)
lyrm4 lyrm4 other upstream 872863 36005489 ~ 36017873 (-)
LOC118944844 riok1 other upstream 891154 36023714 ~ 36025735 (-)
G2132971 NA other upstream 1091587 36224213 ~ 36225379 (-)
G2132966 NA other upstream 1102889 36235515 ~ 36249775 (-)
G2133007 NA other upstream 1130376 36263002 ~ 36263330 (-)

Expression


Co-expression Network