trnaw-cca-84



Basic Information


Item Value
gene id trnaw-cca-84
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35170808 ~ 35170879 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnaw-cca-84
gacctcgtggcgcaatggtagcgcgtctgactccagatcagaaggttgcgtgttcaactcacgtcgtggtca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnaw-cca-84 True 72 mRNA 0.57 1 35170808 35170879

Neighbor


gene id symbol gene type direction distance location
trnaw-cca-83 NA coding downstream 2526 35168211 ~ 35168282 (-)
trnaw-cca-82 NA coding downstream 3830 35166907 ~ 35166978 (-)
trnaw-cca-81 NA coding downstream 5134 35165603 ~ 35165674 (-)
trnaw-cca-80 NA coding downstream 6438 35164299 ~ 35164370 (-)
trnaw-cca-79 NA coding downstream 7742 35162995 ~ 35163066 (-)
trnaw-cca-85 NA coding upstream 1233 35172112 ~ 35172183 (-)
trnaw-cca-86 NA coding upstream 3830 35174709 ~ 35174780 (-)
trnaw-cca-87 NA coding upstream 5134 35176013 ~ 35176084 (-)
trnaw-cca-88 NA coding upstream 7731 35178610 ~ 35178681 (-)
trnaw-cca-89 NA coding upstream 16204 35187083 ~ 35187155 (-)
G2131990 NA non-coding downstream 45085 35123400 ~ 35125723 (-)
G2131976 NA non-coding downstream 56871 35113693 ~ 35113937 (-)
G2131974 NA non-coding downstream 58359 35111996 ~ 35112449 (-)
G2131950 NA non-coding downstream 101669 35068518 ~ 35069139 (-)
G2131906 NA non-coding downstream 128130 35041966 ~ 35042678 (-)
G2132010 NA non-coding upstream 85808 35256687 ~ 35257074 (-)
G2132016 NA non-coding upstream 163999 35334878 ~ 35335159 (-)
G2132018 NA non-coding upstream 185545 35356424 ~ 35356686 (-)
G2132074 NA non-coding upstream 215045 35385924 ~ 35386152 (-)
G2132083 NA non-coding upstream 226138 35397017 ~ 35397255 (-)
G2131641 NA other downstream 652679 34516522 ~ 34518129 (-)
G2131621 NA other downstream 684632 34485869 ~ 34486176 (-)
G2130780 LOC106598333 other downstream 1102735 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 1104143 34040206 ~ 34066665 (-)
lyrm4 lyrm4 other upstream 834610 36005489 ~ 36017873 (-)
LOC118944844 riok1 other upstream 852901 36023714 ~ 36025735 (-)
G2132971 NA other upstream 1053334 36224213 ~ 36225379 (-)
G2132966 NA other upstream 1064636 36235515 ~ 36249775 (-)
G2133007 NA other upstream 1092123 36263002 ~ 36263330 (-)

Expression



Co-expression Network