trnaw-cca-89



Basic Information


Item Value
gene id trnaw-cca-89
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35187083 ~ 35187155 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnaw-cca-89
gacctcgtgtgcgcaatggtagcgcgtctgactccagatcagaaggttgcgtgttcaactcacgtcgtggtca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnaw-cca-89 True 73 mRNA 0.56 1 35187083 35187155

Neighbor


gene id symbol gene type direction distance location
trnaw-cca-88 NA coding downstream 8402 35178610 ~ 35178681 (-)
trnaw-cca-87 NA coding downstream 10999 35176013 ~ 35176084 (-)
trnaw-cca-86 NA coding downstream 12303 35174709 ~ 35174780 (-)
trnaw-cca-85 NA coding downstream 14900 35172112 ~ 35172183 (-)
trnaw-cca-84 NA coding downstream 16204 35170808 ~ 35170879 (-)
trnaw-cca-90 NA coding upstream 1488 35188643 ~ 35188714 (-)
trnaw-cca-91 NA coding upstream 3050 35190205 ~ 35190276 (-)
trnaw-cca-92 NA coding upstream 7735 35194890 ~ 35194961 (-)
trnaw-cca-93 NA coding upstream 10850 35198005 ~ 35198076 (-)
trnaw-cca-94 NA coding upstream 12414 35199569 ~ 35199642 (-)
G2131990 NA non-coding downstream 61360 35123400 ~ 35125723 (-)
G2131976 NA non-coding downstream 73146 35113693 ~ 35113937 (-)
G2131974 NA non-coding downstream 74634 35111996 ~ 35112449 (-)
G2131950 NA non-coding downstream 117944 35068518 ~ 35069139 (-)
G2131906 NA non-coding downstream 144405 35041966 ~ 35042678 (-)
G2132010 NA non-coding upstream 69532 35256687 ~ 35257074 (-)
G2132016 NA non-coding upstream 147723 35334878 ~ 35335159 (-)
G2132018 NA non-coding upstream 169269 35356424 ~ 35356686 (-)
G2132074 NA non-coding upstream 198769 35385924 ~ 35386152 (-)
G2132083 NA non-coding upstream 209862 35397017 ~ 35397255 (-)
G2131641 NA other downstream 668954 34516522 ~ 34518129 (-)
G2131621 NA other downstream 700907 34485869 ~ 34486176 (-)
G2130780 LOC106598333 other downstream 1119010 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 1120418 34040206 ~ 34066665 (-)
lyrm4 lyrm4 other upstream 818334 36005489 ~ 36017873 (-)
LOC118944844 riok1 other upstream 836625 36023714 ~ 36025735 (-)
G2132971 NA other upstream 1037058 36224213 ~ 36225379 (-)
G2132966 NA other upstream 1048360 36235515 ~ 36249775 (-)
G2133007 NA other upstream 1075847 36263002 ~ 36263330 (-)

Expression



Co-expression Network