trnaw-cca-100



Basic Information


Item Value
gene id trnaw-cca-100
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35210504 ~ 35210575 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnaw-cca-100
gacctcgtggcgcaatggtagcgcgtctgactccagatcagaaggttgcgtgttcaactcacgtcgtggtca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnaw-cca-100 True 72 mRNA 0.57 1 35210504 35210575

Neighbor


gene id symbol gene type direction distance location
trnaw-cca-99 NA coding downstream 3053 35207380 ~ 35207451 (-)
trnaw-cca-98 NA coding downstream 4611 35205822 ~ 35205893 (-)
trnaw-cca-97 NA coding downstream 6173 35204260 ~ 35204331 (-)
trnaw-cca-96 NA coding downstream 7737 35202695 ~ 35202767 (-)
trnaw-cca-95 NA coding downstream 9303 35201129 ~ 35201201 (-)
trnaw-cca-101 NA coding upstream 1236 35211811 ~ 35211882 (-)
trnaw-cca-102 NA coding upstream 2797 35213372 ~ 35213443 (-)
trnaw-cca-103 NA coding upstream 4104 35214679 ~ 35214750 (-)
trnaw-cca-104 NA coding upstream 5664 35216239 ~ 35216310 (-)
trnaw-cca-105 NA coding upstream 7225 35217800 ~ 35217871 (-)
G2131990 NA non-coding downstream 84781 35123400 ~ 35125723 (-)
G2131976 NA non-coding downstream 96567 35113693 ~ 35113937 (-)
G2131974 NA non-coding downstream 98055 35111996 ~ 35112449 (-)
G2131950 NA non-coding downstream 141365 35068518 ~ 35069139 (-)
G2131906 NA non-coding downstream 167826 35041966 ~ 35042678 (-)
G2132010 NA non-coding upstream 46112 35256687 ~ 35257074 (-)
G2132016 NA non-coding upstream 124303 35334878 ~ 35335159 (-)
G2132018 NA non-coding upstream 145849 35356424 ~ 35356686 (-)
G2132074 NA non-coding upstream 175349 35385924 ~ 35386152 (-)
G2132083 NA non-coding upstream 186442 35397017 ~ 35397255 (-)
G2131641 NA other downstream 692375 34516522 ~ 34518129 (-)
G2131621 NA other downstream 724328 34485869 ~ 34486176 (-)
G2130780 LOC106598333 other downstream 1142431 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 1143839 34040206 ~ 34066665 (-)
lyrm4 lyrm4 other upstream 794914 36005489 ~ 36017873 (-)
LOC118944844 riok1 other upstream 813205 36023714 ~ 36025735 (-)
G2132971 NA other upstream 1013638 36224213 ~ 36225379 (-)
G2132966 NA other upstream 1024940 36235515 ~ 36249775 (-)
G2133007 NA other upstream 1052427 36263002 ~ 36263330 (-)

Expression



Co-expression Network