trnaw-cca-115


Basic Information

Item Value
gene id trnaw-cca-115
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35233149 ~ 35233220 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaw-cca-115
gacctcgtggcgcaatggtagcgtgtctgactccagatcagaaggttgcgtgttcaactcacgtcgtggtca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaw-cca-115 True 72 mRNA 0.56 1 35233149 35233220

Neighbor

gene id symbol gene type direction distance location
trnaw-cca-114 NA coding downstream 1231 35231847 ~ 35231918 (-)
trnaw-cca-113 NA coding downstream 2790 35230288 ~ 35230359 (-)
trnaw-cca-112 NA coding downstream 4351 35228727 ~ 35228798 (-)
trnaw-cca-111 NA coding downstream 5912 35227166 ~ 35227237 (-)
trnaw-cca-110 NA coding downstream 7473 35225605 ~ 35225676 (-)
trnaw-cca-116 NA coding upstream 1483 35234703 ~ 35234774 (-)
trnaw-cca-117 NA coding upstream 3042 35236262 ~ 35236333 (-)
trnaw-cca-118 NA coding upstream 4344 35237564 ~ 35237635 (-)
trnaw-cca-119 NA coding upstream 5896 35239116 ~ 35239187 (-)
trnaw-cca-120 NA coding upstream 7198 35240418 ~ 35240489 (-)
G2131990 NA non-coding downstream 107426 35123400 ~ 35125723 (-)
G2131976 NA non-coding downstream 119212 35113693 ~ 35113937 (-)
G2131974 NA non-coding downstream 120700 35111996 ~ 35112449 (-)
G2131950 NA non-coding downstream 164010 35068518 ~ 35069139 (-)
G2131906 NA non-coding downstream 190471 35041966 ~ 35042678 (-)
G2132010 NA non-coding upstream 23467 35256687 ~ 35257074 (-)
G2132016 NA non-coding upstream 101658 35334878 ~ 35335159 (-)
G2132018 NA non-coding upstream 123204 35356424 ~ 35356686 (-)
G2132074 NA non-coding upstream 152704 35385924 ~ 35386152 (-)
G2132083 NA non-coding upstream 163797 35397017 ~ 35397255 (-)
G2131641 NA other downstream 715020 34516522 ~ 34518129 (-)
G2131621 NA other downstream 746973 34485869 ~ 34486176 (-)
G2130780 LOC106598333 other downstream 1165076 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 1166484 34040206 ~ 34066665 (-)
lyrm4 lyrm4 other upstream 772269 36005489 ~ 36017873 (-)
LOC118944844 riok1 other upstream 790560 36023714 ~ 36025735 (-)
G2132971 NA other upstream 990993 36224213 ~ 36225379 (-)
G2132966 NA other upstream 1002295 36235515 ~ 36249775 (-)
G2133007 NA other upstream 1029782 36263002 ~ 36263330 (-)

Expression


Co-expression Network